FFCP PHASE1:Mm9::chr11:59778438..59778453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19416 | |EntrezGene=19416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=O35626,Q5SWR8 | |UniProt=O35626,Q5SWR8 | ||
|association_with_transcript=0bp_to_ENSMUST00000062405,NM_009026,uc007jfh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000062405,NM_009026,uc007jfh.1_5end | ||
|cluster_id=chr11:59778438..59778453,- | |||
|description=CAGE_peak_1_at_Rasd1_5end | |description=CAGE_peak_1_at_Rasd1_5end | ||
|id=chr11:59778438..59778453,- | |id=chr11:59778438..59778453,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!3.81e-11!26;UBERON:0000990!3.81e-11!26;UBERON:0003133!2.38e-10!24;UBERON:0007023!1.04e-09!51;UBERON:0003101!6.09e-08!16;UBERON:0000079!6.09e-08!16;UBERON:0003135!1.19e-07!15;UBERON:0000991!2.08e-07!18;UBERON:0005564!2.08e-07!18;UBERON:0004176!3.17e-07!17;UBERON:0009196!3.17e-07!17;UBERON:0009117!3.17e-07!17;UBERON:0000473!5.35e-07!14 | |ontology_enrichment_uberon=UBERON:0005156!3.81e-11!26;UBERON:0000990!3.81e-11!26;UBERON:0003133!2.38e-10!24;UBERON:0007023!1.04e-09!51;UBERON:0003101!6.09e-08!16;UBERON:0000079!6.09e-08!16;UBERON:0003135!1.19e-07!15;UBERON:0000991!2.08e-07!18;UBERON:0005564!2.08e-07!18;UBERON:0004176!3.17e-07!17;UBERON:0009196!3.17e-07!17;UBERON:0009117!3.17e-07!17;UBERON:0000473!5.35e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,3.18e-11,26;UBERON:0000990,3.18e-11,26;UBERON:0003133,2.02e-10,24;UBERON:0007023,1.08e-09,51;UBERON:0003101,5.40e-08,16;UBERON:0000079,5.40e-08,16;UBERON:0003135,1.06e-07,15;UBERON:0000991,1.86e-07,18;UBERON:0005564,1.86e-07,18;UBERON:0004176,2.85e-07,17;UBERON:0009196,2.85e-07,17;UBERON:0009117,2.85e-07,17;UBERON:0000473,4.83e-07,14 | |||
|phase1_expression=7.68714466103011,268.013113067029,302.574494194041,50.5115232882406,65.1164448930251,116.172456163028,126.85166384337,0.645616617207881,14.0788722151667,23.1723881058774,0,0.239316476986009,0.684802919724823,0.786783621770977,0,0.607425802169478,0,1.73504190947031,1.37114433605739,2.54633791078818,20.5804762165589,0.794327609607082,0.261199789138935,57.1172949372462,51.1582696779789,264.146703492909,212.365664106424,200.819188863249,3.23039813075836,2.01624103807945,65.8539616646255,6.98533740805594,3.69038872550742,0,18.1976520443303,10.9714865936605,32.6670970019791,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.304130793658544,0.367093504323363,1.56478268869608,0,0.439372365468944,0.972149495371417,23.0977595681848,0,41.2745210902031,6.5282592781021,3.02484419228218,0.257259436035947,0.286533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,5.08266798103698,7.11435836888911,0,0,0,1.19840044207362,0.768436610643109,0.103689612308478,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.122490799214954,0.287536413054709,0,14.3150645299205,40.0938241587489,28.5708151856613,1.18697658957174,0.640413505216868,0,5.02529398202486,10.1297269805702,5.80633341551878,1.17851434189467,1.70846016958924,0.372798891650601,1.81742863999642,1.66257432234928,78.263411949453,12.0459342777394,18.3592260101093,0,0.649776417447669,0.896053774194671,7.02222100658759,0,0.259786004602869,0.35333957451034,9.15482228548423,0,2.54805239706646,0,0,0,0,11.0758363327488,3.10725460376606,40.673146103762,3.12273588179045,4.56698217468212,5.07354093963329,6.78251882486802,10.5829836422134,33.5529798850234,45.7310690308592,152.407722193587,1.76922110389975,2.58826959915855,5.07935492458905,6.30337829075789,18.6391761218122,5.85561594023094,4.60782754989601,7.15279754584056,2.03685711660064,2.39961092397363,2.41433431438823,9.8861822007183,16.0125210986519,0,4.69325664519146,6.90431734791892,54.4404676746047,35.8553191379744,4.48093200941392,56.231950715762,262.326223254154,4.41927897361595,2.34216797332867,0,0.900310649026746,1.05493372485001,2.4493139694478,0.896796041993948,1.78033276663485,4.65666067330228,1.07783996466421,1.51284864134255,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.85203922767149,9.95171334092466,3.51106593656617,0.772043721344145,1.13665399758237,12.8417978972011,11.9608290590359,7.74266864282364,7.10234206755631,7.67380503814875,6.94202007993202,7.90615412151387,7.24338183778972,8.52386999280337,7.5697530960201,8.86504306027114,11.9171150032408,10.3801991071986,16.0271584162467,13.4206418760372,51.1004575010829,2.46971069710283,3.63460661282178,8.46241813323342,2.34617075588757,1.39342003116263,0.77320476793256,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,2.30578536613615,5.27803938480566,4.17808591286417,7.99352757188393,3.59527763461689,11.2391785934841,12.7450414882795,3.03468641524931,2.74196430263349,4.50830942692322,3.86937522906097,2.13347735884388,9.95928642442524,8.09427675190493,11.8088118383682,9.26292494264111,18.7563689161137,1.48226313543574,1.00107063429656,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,3.56476192493988,5.17853047411459,6.80967952455149,2.19649130550465,5.75072826109418,6.32639611036456,2.49630138491648,1.01031551178845,1.79397413521912,0.482443521363367,6.28160846566456,3.97931964718018,2.77040459951444,2.54617628662782,0.938760993154008,2.34508760418542,2.38043640886014,4.68320754858717,1.89162172927429,1.99318220683897,2.39182152986231,5.24362607090362,6.21665934717224,9.40218880779825,0,0,25.0799779239708,46.3573733791951,9.15138362930414,8.20481806145422,0,10.0988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,5.14114106274891,86.5834519770439,5.87616492101942,4.88660878060728,34.3137855782874,2.65490276679926,6.31229654002952,7.86041248108353,9.43025398779491,9.15435867930396,4.91896236710284,4.39328098385976,23.2661586865604,28.5197902707777,7.58488219045958,4.21674434299995,7.21948802737308,141.282436387822,0.720244376125241,1.81102157295856,2.7863814554107,46.8178216815602,50.656744198988,54.1366277780978,115.392215714433,14.3149741918863,35.375955834258,14.3343458735725,17.6428290647384,9.04200789497071,24.7886121454721,17.6671069124642,7.71462228801788,3.20628920292836,4.45020724825223,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,1.14389086603261,4.24946074984638,10.216456019627,7.04819866402561,10.5013767981662,2.37251995185852,2.43983360552218,1.40406943068342,1.88179466413022,1.74690050996942,1.75323650300267,2.56225712748541,7.32916637555283,15.035336901848,25.474911836564,43.9680492173668,26.3149121037403,30.6098207345631,28.0009711215429,32.677435339866,30.9189709648124,23.8235194450881,30.9886435928601,49.8081886022127,36.4792022447269,31.6833006883652,6.63623353319174,1.01362607645082,1.64337531463724,1.55904987573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| |phase1_expression=7.68714466103011,268.013113067029,302.574494194041,50.5115232882406,65.1164448930251,116.172456163028,126.85166384337,0.645616617207881,14.0788722151667,23.1723881058774,0,0.239316476986009,0.684802919724823,0.786783621770977,0,0.607425802169478,0,1.73504190947031,1.37114433605739,2.54633791078818,20.5804762165589,0.794327609607082,0.261199789138935,57.1172949372462,51.1582696779789,264.146703492909,212.365664106424,200.819188863249,3.23039813075836,2.01624103807945,65.8539616646255,6.98533740805594,3.69038872550742,0,18.1976520443303,10.9714865936605,32.6670970019791,0.837063261473815,0,0.523523743973798,1.17646297606203,0,0,0,0.304130793658544,0.367093504323363,1.56478268869608,0,0.439372365468944,0.972149495371417,23.0977595681848,0,41.2745210902031,6.5282592781021,3.02484419228218,0.257259436035947,0.286533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,5.08266798103698,7.11435836888911,0,0,0,1.19840044207362,0.768436610643109,0.103689612308478,0.540023753326763,0.420649922702764,1.42825492201902,1.10434270475807,0.122490799214954,0.287536413054709,0,14.3150645299205,40.0938241587489,28.5708151856613,1.18697658957174,0.640413505216868,0,5.02529398202486,10.1297269805702,5.80633341551878,1.17851434189467,1.70846016958924,0.372798891650601,1.81742863999642,1.66257432234928,78.263411949453,12.0459342777394,18.3592260101093,0,0.649776417447669,0.896053774194671,7.02222100658759,0,0.259786004602869,0.35333957451034,9.15482228548423,0,2.54805239706646,0,0,0,0,11.0758363327488,3.10725460376606,40.673146103762,3.12273588179045,4.56698217468212,5.07354093963329,6.78251882486802,10.5829836422134,33.5529798850234,45.7310690308592,152.407722193587,1.76922110389975,2.58826959915855,5.07935492458905,6.30337829075789,18.6391761218122,5.85561594023094,4.60782754989601,7.15279754584056,2.03685711660064,2.39961092397363,2.41433431438823,9.8861822007183,16.0125210986519,0,4.69325664519146,6.90431734791892,54.4404676746047,35.8553191379744,4.48093200941392,56.231950715762,262.326223254154,4.41927897361595,2.34216797332867,0,0.900310649026746,1.05493372485001,2.4493139694478,0.896796041993948,1.78033276663485,4.65666067330228,1.07783996466421,1.51284864134255,1.75951124163949,2.84954452155847,1.66828349535359,2.43776516565517,1.85203922767149,9.95171334092466,3.51106593656617,0.772043721344145,1.13665399758237,12.8417978972011,11.9608290590359,7.74266864282364,7.10234206755631,7.67380503814875,6.94202007993202,7.90615412151387,7.24338183778972,8.52386999280337,7.5697530960201,8.86504306027114,11.9171150032408,10.3801991071986,16.0271584162467,13.4206418760372,51.1004575010829,2.46971069710283,3.63460661282178,8.46241813323342,2.34617075588757,1.39342003116263,0.77320476793256,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,2.30578536613615,5.27803938480566,4.17808591286417,7.99352757188393,3.59527763461689,11.2391785934841,12.7450414882795,3.03468641524931,2.74196430263349,4.50830942692322,3.86937522906097,2.13347735884388,9.95928642442524,8.09427675190493,11.8088118383682,9.26292494264111,18.7563689161137,1.48226313543574,1.00107063429656,1.76903095601883,1.12431056192427,0.405720242777006,2.17059443777175,3.56476192493988,5.17853047411459,6.80967952455149,2.19649130550465,5.75072826109418,6.32639611036456,2.49630138491648,1.01031551178845,1.79397413521912,0.482443521363367,6.28160846566456,3.97931964718018,2.77040459951444,2.54617628662782,0.938760993154008,2.34508760418542,2.38043640886014,4.68320754858717,1.89162172927429,1.99318220683897,2.39182152986231,5.24362607090362,6.21665934717224,9.40218880779825,0,0,25.0799779239708,46.3573733791951,9.15138362930414,8.20481806145422,0,10.0988370881749,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0,5.14114106274891,86.5834519770439,5.87616492101942,4.88660878060728,34.3137855782874,2.65490276679926,6.31229654002952,7.86041248108353,9.43025398779491,9.15435867930396,4.91896236710284,4.39328098385976,23.2661586865604,28.5197902707777,7.58488219045958,4.21674434299995,7.21948802737308,141.282436387822,0.720244376125241,1.81102157295856,2.7863814554107,46.8178216815602,50.656744198988,54.1366277780978,115.392215714433,14.3149741918863,35.375955834258,14.3343458735725,17.6428290647384,9.04200789497071,24.7886121454721,17.6671069124642,7.71462228801788,3.20628920292836,4.45020724825223,0.683483523191411,6.19160603889667,4.07427960213366,1.13021074202815,0.410082683163076,1.14389086603261,4.24946074984638,10.216456019627,7.04819866402561,10.5013767981662,2.37251995185852,2.43983360552218,1.40406943068342,1.88179466413022,1.74690050996942,1.75323650300267,2.56225712748541,7.32916637555283,15.035336901848,25.474911836564,43.9680492173668,26.3149121037403,30.6098207345631,28.0009711215429,32.677435339866,30.9189709648124,23.8235194450881,30.9886435928601,49.8081886022127,36.4792022447269,31.6833006883652,6.63623353319174,1.01362607645082,1.64337531463724,1.55904987573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| ||
|short_description=p1@Rasd1 | |short_description=p1@Rasd1 | ||
}} | }} |
Latest revision as of 19:46, 1 October 2015
Short description: | p1@Rasd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rasd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 0bp_to_ENSMUST00000062405, NM_009026, uc007jfh.1_5end |
EntrezGene: | Rasd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive structure | 3.18e-11 | 26 |
reproductive system | 3.18e-11 | 26 |
reproductive organ | 2.02e-10 | 24 |
adult organism | 1.08e-09 | 51 |
male organism | 5.40e-08 | 16 |
male reproductive system | 5.40e-08 | 16 |
male reproductive organ | 1.06e-07 | 15 |
gonad | 1.86e-07 | 18 |
gonad primordium | 1.86e-07 | 18 |
external genitalia | 2.85e-07 | 17 |
indifferent external genitalia | 2.85e-07 | 17 |
indifferent gonad | 2.85e-07 | 17 |
testis | 4.83e-07 | 14 |