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FFCP PHASE1:Mm9::chr1:74331613..74331646,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56695
|EntrezGene=56695
|HGNC=
|HGNC=
|MCL_coexpression_id=1163
|TSSclassifier=NA
|UniProt=Q69ZP3
|UniProt=Q69ZP3
|association_with_transcript=0bp_to_ENSMUST00000027370,ENSMUST00000087226,ENSMUST00000129219,ENSMUST00000138620_5end
|association_with_transcript=0bp_to_ENSMUST00000027370,ENSMUST00000087226,ENSMUST00000129219,ENSMUST00000138620_5end
|cluster_id=chr1:74331613..74331646,+
|description=CAGE_peak_1_at_Pnkd_5end
|description=CAGE_peak_1_at_Pnkd_5end
|id=chr1:74331613..74331646,+
|id=chr1:74331613..74331646,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.55e-14!73;UBERON:0005743!2.55e-14!73;UBERON:0001049!9.37e-14!52;UBERON:0005068!9.37e-14!52;UBERON:0006241!9.37e-14!52;UBERON:0007135!9.37e-14!52;UBERON:0000073!1.59e-13!75;UBERON:0001016!1.59e-13!75;UBERON:0000955!7.89e-13!50;UBERON:0006238!7.89e-13!50;UBERON:0002616!2.14e-12!49;UBERON:0002020!2.18e-10!34;UBERON:0000025!4.65e-10!114;UBERON:0000033!9.75e-10!63;UBERON:0004111!1.57e-09!122;UBERON:0002346!1.72e-09!71;UBERON:0003075!1.72e-09!71;UBERON:0007284!1.72e-09!71;UBERON:0003080!4.44e-08!40;UBERON:0002791!5.67e-08!29;UBERON:0003528!5.67e-08!29;UBERON:0001893!5.67e-08!29;UBERON:0003103!5.74e-08!43;UBERON:0007100!7.12e-08!18;UBERON:0000948!7.12e-08!18;UBERON:0005498!7.12e-08!18;UBERON:0004140!7.12e-08!18;UBERON:0009881!7.12e-08!18;UBERON:0004141!7.12e-08!18;UBERON:0003084!7.12e-08!18;UBERON:0007005!7.12e-08!18;UBERON:0004139!7.12e-08!18;UBERON:0004291!7.12e-08!18;UBERON:0002780!1.52e-07!39;UBERON:0001890!1.52e-07!39;UBERON:0006240!1.52e-07!39;UBERON:0003076!1.85e-07!12;UBERON:0003057!1.85e-07!12;UBERON:0004535!2.42e-07!23;UBERON:0001009!2.42e-07!23;UBERON:0004121!2.89e-07!102;UBERON:0000924!2.89e-07!102;UBERON:0006601!2.89e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.08e-16,92;UBERON:0000073,5.99e-15,54;UBERON:0001017,2.55e-14,73;UBERON:0001049,9.37e-14,52;UBERON:0005068,9.37e-14,52;UBERON:0006241,9.37e-14,52;UBERON:0007135,9.37e-14,52;UBERON:0001016,1.59e-13,75;UBERON:0000955,4.42e-11,47;UBERON:0006238,4.42e-11,47;UBERON:0002616,1.15e-10,46;UBERON:0002020,2.18e-10,34;UBERON:0002346,2.85e-10,64;UBERON:0003075,2.85e-10,64;UBERON:0007284,2.85e-10,64;UBERON:0000025,4.65e-10,114;UBERON:0004111,1.57e-09,122;UBERON:0003080,4.44e-08,40;UBERON:0003528,5.67e-08,29;UBERON:0002791,5.67e-08,29;UBERON:0001893,5.67e-08,29;UBERON:0003103,5.74e-08,43;UBERON:0007100,7.12e-08,18;UBERON:0000948,7.12e-08,18;UBERON:0005498,7.12e-08,18;UBERON:0004140,7.12e-08,18;UBERON:0009881,7.12e-08,18;UBERON:0004141,7.12e-08,18;UBERON:0003084,7.12e-08,18;UBERON:0007005,7.12e-08,18;UBERON:0004139,7.12e-08,18;UBERON:0004291,7.12e-08,18;UBERON:0004121,1.27e-07,95;UBERON:0000924,1.27e-07,95;UBERON:0006601,1.27e-07,95;UBERON:0002780,1.52e-07,39;UBERON:0001890,1.52e-07,39;UBERON:0006240,1.52e-07,39;UBERON:0003076,1.85e-07,12;UBERON:0003057,1.85e-07,12;UBERON:0004535,2.42e-07,23;UBERON:0001009,2.42e-07,23;UBERON:0010371,9.79e-07,73
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|phase1_expression=23.3817316772999,31.7567620951819,37.7649368693315,50.8139874995474,51.5922601844738,26.8606835059024,24.7629399031257,19.1102518693533,3.801295498095,4.91535505276186,8.38968044304974,10.7692414643704,18.6608795625014,19.3199089345984,11.6588416635482,12.1485160433896,9.09430441566591,14.1957974411207,12.7516423253337,14.004858509335,40.3955628217581,19.7588992889762,22.4631818659484,27.3587042976725,30.970252944068,55.700500519157,44.7992476005438,33.6135122989987,41.2350820220331,29.7395553116718,33.2595765982957,10.1604907753541,12.3012957516914,47.5445043046316,30.9071233133864,36.0729180427928,34.5046212083404,15.9042019680025,19.533383613095,9.94695113550217,10.5881667845583,15.7100461540443,12.1377588257788,31.9777917657966,34.2654027521959,33.5890556455877,67.2856556139314,90.9164902106462,42.1797470850186,58.1345398232107,50.6750846283812,48.8758718840903,9.2280433331755,11.6057942721815,9.41062637598899,19.8089765747679,23.2092086350393,27.8462929829819,33.7868489635528,32.797440714866,41.1990412279016,37.6117430596737,38.239676232779,54.4439328955246,78.120442642791,65.3641705750412,64.1144236509386,85.6806820867067,26.0260926894279,32.1314133229424,27.3422449756797,114.546044745925,94.0899984453874,24.4981598429908,30.6705507258356,34.9303138911808,132.139057199266,116.833914347947,117.048178341258,31.1251639043257,40.2545631850602,29.1711487511786,138.474767504685,75.4101897442451,81.7470625605934,76.6034322231536,65.7757165291856,49.0230542520541,16.5083101466341,26.8279038379089,17.6817338108023,46.4628893569949,27.8788246820178,47.4938808641279,31.1892680374881,20.1612099193801,35.2515494530697,33.5747735478774,43.644048773282,42.4007489412408,34.9291681046168,20.5322363862909,25.4805239706646,28.4426681261332,19.0512116089868,13.9347926011304,18.1988800205322,33.4558767576846,10.616453229534,23.3054158331775,27.5841669558156,28.9242204396534,27.9044751679831,27.4315205805773,20.1076689202055,33.1759801110343,14.3373081285937,36.7282366576576,19.4614321428972,35.1034064385878,19.654895142975,16.4857586065976,22.3670113461747,36.5975996264434,42.3082347763179,20.1811073614787,6.70964697233154,19.7967901227825,9.40319680340679,150.988964520061,91.9576211665439,30.9109706197646,71.9632685596025,59.8374170152973,106.595266859054,74.955463537304,19.3494791315601,18.2878246796837,27.7995034277042,22.7277204357392,26.4144499214289,24.5995251743816,22.147641966058,25.3184093964001,20.138803748793,23.1885833715578,23.6128345890517,24.5768202202065,20.47895932862,18.3432897762785,18.8267702855425,20.3852031157645,18.6291656981151,20.5468778248078,22.6360350048738,21.8937693500343,14.7464769335779,19.3010930336036,10.7982129770325,58.202342082476,71.7649743542154,86.4297895012871,74.1011022381708,120.616474061159,105.981506553629,126.498465944222,130.380873080215,99.9511330662971,113.052616890561,91.2771100279769,82.041635260406,80.5561930713581,79.9162419659424,71.8004340367989,61.8252448778534,29.7394329776132,33.7027158643474,25.3872543997003,28.3673373211861,29.4940573262757,24.7425525738419,24.0003394301778,25.1287189544703,30.0556489257843,29.4208018157597,36.0690710845584,31.9195715176342,21.4872989804443,26.3201517610812,26.9645822596266,29.6109128328331,32.4600275404619,26.3638382324784,27.8766370767738,34.9393980586549,40.7302655690629,39.372354895028,33.8756010070239,44.4552855983529,61.2582114115349,59.9735140354052,73.2979153695495,36.7601257588065,9.84386123724955,13.3660116676978,8.09503604585473,15.8230894683032,17.364755502174,18.5876871800436,13.5217184601881,25.2930953769055,26.0833342528677,5.75072826109418,22.7005978077787,28.0833905803105,25.7630455506054,26.7302146147649,49.6916827004268,19.2143317773269,28.6132031773432,19.7187621494851,28.1776842386812,25.5812370634467,21.9433197248779,22.3761022432853,18.5376965464909,25.8521636334153,20.5962161373361,24.3965796045955,24.7433605220764,23.4851575337618,20.3955172599931,27.142431109069,21.7562273527484,19.1788066477424,16.0043312856745,178.050604296461,150.382593897797,23.2787622434879,32.0638077549554,27.4492150892143,28.8924670779512,23.6965737506079,20.5513166239195,15.5959071857676,18.1168979704853,24.6934528021686,21.3346776275258,23.3219788988449,58.4804795887689,19.4457916735328,29.9150214160989,21.6639655940256,21.9410263553472,29.2039304347918,27.1914312493579,30.8370028104046,33.0058889572822,25.3959627877465,21.5204603560749,16.7978390559344,21.0849563096953,21.746340081468,17.3820216864699,21.0837217149998,25.7838858120467,21.1072555567349,25.2085531643834,34.1506925186472,28.2924886241702,24.2956120089915,26.7553226403106,27.15058839935,30.4464949114599,18.7737366450968,28.5973295666157,41.0182820382229,13.5206727412014,14.6932628293274,17.9732516285904,15.9958940964203,11.9822856813895,26.8162369699463,182.829347782363,11.619219894254,18.7812049846532,17.7786746274923,10.9253705062721,11.072232445403,10.5237959675,5.77926661979108,6.57771825921193,11.746997773376,45.8241896647254,24.6742074993286,22.7717803182071,27.7573725912029,25.7178604097797,33.191109689419,30.2096135901998,24.8786901733261,48.1630933250614,31.885283429781,32.9309835936071,24.8024893021044,22.2779653605528,28.2934018681637,20.222923587781,26.0902843425017,20.7816034353657,16.0779416944683,18.228613878153,16.3580577304109,31.6475198282068,23.9064905194028,14.8525226695244,22.9079493277886,20.234058561471,21.1770941453806,18.0816962624156,15.6958270277199,17.3081447308755,21.5626709674883,16.2555984416518,17.756185950615,16.5354943624418,16.3729239642784,17.799190703461,14.7264896748777,26.5274548829797,23.0865391509027,33.5529823719439,25.1826924546118,25.5010264122491,21.5834846768859,18.1320108024592,11.7902608493486,19.5613120573792,57.0399361043237,46.0325236507177,57.2895513439397,56.0241374440422,59.6021792200459,58.9207239963966,62.7770925215579,51.7869383707854,57.0959435320098,41.9385852518974,26.8809230243018,29.1288157582753,21.5124343250209,19.4485373654635,20.7517031001702,32.1726139787525,28.89207461421,36.4682051312843,39.1521435702015,36.3883984939868,32.1918710860604,29.0484565734557,30.9953389725311,35.277858975083,33.0253946494776,25.2435656380029,39.8642081250303,35.8811150062491,38.3239887747075,28.5565905060731,34.2869252385415,45.0788547644717,30.2813961233098,34.8831399917588,31.3384236783051,32.0689363909454,40.24415403201,39.7235264271143,32.3213790953151,30.3016826695179,32.2687249297754,32.6049836663115,50.7446493530415,39.9737050259792,28.5501784252089,29.7274587746156,32.5164935739118,22.346589621023,32.7103047837722,35.074035640003,33.3889683293407
|short_description=p1@Pnkd
|short_description=p1@Pnkd
}}
}}

Latest revision as of 14:24, 1 October 2015

Short description:p1@Pnkd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pnkd_5end
Coexpression cluster:MCL_coexpression_mm9:1163
Association with transcript: 0bp_to_ENSMUST00000027370, ENSMUST00000087226, ENSMUST00000129219, ENSMUST00000138620_5end
EntrezGene:Pnkd
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pnkd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I637.76
CD326+ enterocyte, pool1.CNhs13542.11848-124I350.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.76
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.66
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.15
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.75
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D230.97
GP2+ M cell, pool1.CNhs13228.11845-124H955.70
GP2+ M cell, pool2.CNhs13231.11846-124I144.80
GP2+ M cell, pool3.CNhs13240.11847-124I233.61
Ileum epithelium, pool1.CNhs13199.10252-104B941.24
Ileum epithelium, pool2.CNhs13232.10253-104C129.74
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C833.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.07
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D934.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B767.29
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C290.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B842.18
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C358.13
Mouse Astrocytes, donor2.CNhs12078.11552-120C450.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C448.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.81
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.85
Mouse Granule cells, donor1.CNhs12131.11713-123C333.79
Mouse Granule cells, donor2.CNhs12357.11731-123E332.80
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.61
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C754.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E778.12
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D265.36
Mouse Microglia, donor1.CNhs12629.11718-123C864.11
Mouse Microglia, donor2.CNhs12634.11736-123E885.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1114.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D594.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3132.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3116.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7117.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4138.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E575.41
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I681.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D676.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F665.78
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.02
Mouse Schwann, donor1.CNhs12507.11728-123D916.51
Mouse Schwann, donor2.CNhs12573.11746-123F926.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C847.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A735.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E343.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.40
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B633.46
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D723.31
adrenal gland, embryo E14.CNhs11038.406-44C527.58
adrenal gland, embryo E16.CNhs11004.1254-43D628.92
adrenal gland, embryo E17.CNhs11043.1263-45I127.90
adrenal gland, embryo E18.CNhs11026.1262-18F527.43
adrenal gland, neonate N00.CNhs11191.1311-23C120.11
adrenal gland, neonate N25.CNhs11223.1377-27I333.18
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H136.73
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F535.10
bone (os femoris), neonate N16.CNhs11225.1525-43A619.65
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B236.60
cerebellum, neonate N30.CNhs11135.1395-42I242.31
colon, adult.CNhs10468.36-18H720.18
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.40
corpora quadrigemina, adult.CNhs10501.16-22A4150.99
corpus striatum, adult.CNhs10487.19-21D891.96
corpus striatum, neonate N00.CNhs11226.630-43F130.91
cortex, adult.CNhs10473.12-14D571.96
cortex, neonate N30.CNhs11107.1392-42F259.84
diencephalon, adult.CNhs10482.20-12F2106.60
diencephalon, neonate N30.CNhs11201.1388-42B274.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.35
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.29
epididymis, adult.CNhs10490.58-23B227.80
eyeball, adult.CNhs10484.31-12G422.73
eyeball, embryo E12.CNhs11016.345-16C626.41
eyeball, embryo E14.CNhs10521.399-16E224.60
eyeball, embryo E15.CNhs10593.426-16C922.15
eyeball, embryo E17.CNhs11023.1261-18D425.32
eyeball, neonate N00.CNhs11207.633-15C620.14
eyeball, neonate N01.CNhs11140.1532-43E723.19
eyeball, neonate N02.CNhs11205.1551-44G823.61
eyeball, neonate N16.CNhs11188.777-19A224.58
forelimb, embryo E11.CNhs10596.335-25E220.48
forelimb, embryo E12.CNhs10600.359-14H218.34
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A820.39
forelimb, embryo E15.CNhs11007.437-20E718.63
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B522.64
gonad, embryo E13.CNhs11044.1564-45I621.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.30
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.80
heart, embryo E11.CNhs10586.331-24E958.20
heart, embryo E12.CNhs11015.353-12F571.76
heart, embryo E13.CNhs11013.376-3I986.43
heart, embryo E14.CNhs10597.403-26D474.10
heart, embryo E15.CNhs11017.431-16C8120.62
heart, embryo E16.CNhs11021.457-17C6105.98
heart, embryo E17.CNhs11025.479-18E5126.50
heart, embryo E18.CNhs11030.1283-20G3130.38
heart, neonate N00.CNhs11213.639-21E399.95
heart, neonate N03.CNhs11221.1349-25I2113.05
heart, neonate N10.CNhs11118.749-24G191.28
heart, neonate N16.CNhs11209.782-15G182.04
heart, neonate N20.CNhs11127.821-26I680.56
heart, neonate N25.CNhs11196.1351-25D379.92
heart, neonate N30.CNhs11202.1390-42D271.80
hippocampus, adult.CNhs10478.13-16E861.83
hippocampus, neonate N00.CNhs11228.627-43G129.74
intestinal mucosa, adult.CNhs10506.860-29I333.70
intestine, adult.CNhs10496.178-9A325.39
intestine, embryo E12.CNhs11019.1251-16I528.37
intestine, embryo E13.CNhs11010.381-16D529.49
intestine, embryo E15.CNhs10602.976-16D824.74
intestine, embryo E16.CNhs10585.463-22H424.00
intestine, embryo E17.CNhs10582.482-18D325.13
intestine, embryo E18.CNhs10526.1289-20F730.06
intestine, neonate N00.CNhs11126.644-26D129.42
intestine, neonate N01.CNhs11192.1322-23E936.07
intestine, neonate N06.CNhs11102.688-20B831.92
intestine, neonate N07.CNhs11095.720-20F221.49
intestine, neonate N10.CNhs11098.755-23A526.32
intestine, neonate N20.CNhs11187.827-18D126.96
intestine, neonate N25.CNhs11121.1352-25E329.61
intestine, neonate N30.CNhs11131.1384-42G132.46
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F827.88
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I240.73
kidney, embryo E18.CNhs11001.1288-20C739.37
kidney, neonate N00.CNhs11214.646-21G733.88
kidney, neonate N10.CNhs11206.758-6D544.46
kidney, neonate N20.CNhs11113.832-19I161.26
kidney, neonate N25.CNhs11122.1353-25F359.97
kidney, neonate N30.CNhs11203.1385-42H173.30
liver, adult pregnant day01.CNhs10466.508-5B236.76
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F517.36
liver, embryo E17.CNhs10510.481-18A318.59
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F425.29
liver, neonate N03.CNhs11123.1345-25G226.08
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H222.70
liver, neonate N10.CNhs11115.751-24B928.08
liver, neonate N20.CNhs11220.823-25A325.76
liver, neonate N25.CNhs11198.1368-26H126.73
liver, neonate N30.CNhs11106.1382-42D149.69
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G228.61
lung, embryo E14.CNhs10604.404-26F819.72
lung, embryo E15.CNhs11020.432-17C528.18
lung, embryo E16.CNhs10998.458-17B625.58
lung, embryo E17.CNhs10605.480-44A621.94
lung, embryo E18.CNhs10583.1287-20I622.38
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E525.85
lung, neonate N07.CNhs11111.715-19A320.60
lung, neonate N10.CNhs11219.750-23E624.40
lung, neonate N20.CNhs11109.822-18A424.74
lung, neonate N25.CNhs11119.1359-25C723.49
lung, neonate N30.CNhs11133.1394-42H220.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B619.18
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C2178.05
medulla oblongata, neonate N30.CNhs11200.1396-42A3150.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.70
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.12
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.32
olfactory brain, adult.CNhs10489.18-22I958.48
ovary, adult.CNhs10507.91-2I719.45
ovary, embryo E18.CNhs11040.505-44H729.92
ovary, neonate N00.CNhs11217.1299-22I421.66
oviduct, adult pregnant day01.CNhs10500.988-6G621.94
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F230.84
pancreas, embryo E16.CNhs11003.460-26E533.01
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G916.80
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D821.75
pancreas, neonate N16.CNhs11136.787-43B617.38
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E625.21
pituitary gland, embryo E13.CNhs11009.370-44C734.15
pituitary gland, embryo E14.CNhs11037.398-44A528.29
pituitary gland, embryo E15.CNhs10592.427-16B924.30
pituitary gland, embryo E16.CNhs11036.449-43F626.76
pituitary gland, embryo E17.CNhs11039.1265-44F527.15
pituitary gland, neonate N00.CNhs11190.1308-22E930.45
placenta, adult pregnant day10.CNhs10472.539-13I718.77
placenta, adult pregnant day17.CNhs10464.577-18G328.60
prostate, adult.CNhs10470.859-1F841.02
skin, adult.CNhs10492.30-1C313.52
skin, neonate N00.CNhs11124.650-25G414.69
skin, neonate N03.CNhs11215.662-22H317.97
skin, neonate N06.CNhs11097.693-20I516.00
skin, neonate N10.CNhs11108.762-6C411.98
small intestine, neonate N16.CNhs11114.790-21I126.82
spinal cord, adult.CNhs10505.24-13C9182.83
spleen, adult.CNhs10465.25-2G211.62
spleen, embryo E16.CNhs11035.461-43C118.78
spleen, embryo E18.CNhs11011.1271-21F217.78
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.75
stomach, adult.CNhs10503.33-1H645.82
stomach, embryo E12.CNhs10588.356-43E324.67
stomach, embryo E15.CNhs10603.1252-16G822.77
stomach, embryo E16.CNhs11022.459-17D427.76
stomach, embryo E17.CNhs11006.1035-18D525.72
stomach, embryo E18.CNhs10999.1286-20C633.19
stomach, neonate N03.CNhs11193.1340-24B830.21
stomach, neonate N07.CNhs11210.718-18A924.88
stomach, neonate N25.CNhs11104.1355-25E448.16
stomach, neonate N30.CNhs11134.1386-42I131.89
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F522.28
testis, embryo E15.CNhs11034.443-27C528.29
testis, embryo E16.CNhs11033.470-26G520.22
testis, embryo E17.CNhs11029.486-18I526.09
testis, embryo E18.CNhs11027.503-18G520.78
testis, neonate N00.CNhs11189.1300-22B716.08
testis, neonate N07.CNhs11222.726-26I418.23
testis, neonate N10.CNhs11204.763-44D916.36
testis, neonate N20.CNhs11110.839-18H331.65
testis, neonate N30.CNhs11130.1391-42E223.91
thymus, adult.CNhs10471.38-12B514.85
thymus, embryo E14.CNhs11041.402-44I422.91
thymus, embryo E15.CNhs11005.430-45I220.23
thymus, embryo E16.CNhs11002.456-26C521.18
thymus, embryo E17.CNhs10581.478-18C118.08
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F817.31
thymus, neonate N03.CNhs11137.2104-43C721.56
thymus, neonate N06.CNhs11197.681-26C416.26
thymus, neonate N07.CNhs11211.713-19D317.76
thymus, neonate N10.CNhs11194.748-24E416.54
thymus, neonate N20.CNhs11186.820-7A216.37
thymus, neonate N25.CNhs11125.1362-25G717.80
thymus, neonate N30.CNhs11132.1393-42G214.73
tongue, adult.CNhs10499.32-1B426.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.55
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.18
urinary bladder, adult.CNhs10481.879-12E425.50
uterus, adult pregnant day19.CNhs10497.590-15F521.58
uterus, adult.CNhs10509.92-27E518.13
vagina, adult.CNhs10502.89-27D511.79
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A357.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D756.02
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A459.60
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A558.92
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A751.79
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.10
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.94
whole body, embryo E11.CNhs11014.324-5I826.88
whole body, embryo E12.CNhs10587.857-27C929.13
whole body, embryo E13.CNhs10512.372-23H221.51
whole body, embryo E14.5.CNhs10578.420-27D219.45
whole body, embryo E14.CNhs10519.395-14B120.75
whole body, embryo E16.CNhs10514.453-14F232.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G536.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.39
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G539.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.88
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.32
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G528.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G545.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.28
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G534.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G540.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G539.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G532.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G550.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.97
whole body, embryo E17.5.CNhs10513.490-9F928.55
whole body, embryo E17.CNhs10517.475-3I529.73
whole body, embryo E18.CNhs10516.493-3B332.52
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C632.71
whole body, neonate N06.CNhs10515.692-21D135.07
whole body, neonate N10.CNhs10518.761-6B433.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest6.08e-1692
regional part of nervous system5.99e-1554
central nervous system2.55e-1473
neural tube9.37e-1452
neural rod9.37e-1452
future spinal cord9.37e-1452
neural keel9.37e-1452
nervous system1.59e-1375
brain4.42e-1147
future brain4.42e-1147
regional part of brain1.15e-1046
gray matter2.18e-1034
neurectoderm2.85e-1064
neural plate2.85e-1064
presumptive neural plate2.85e-1064
tube4.65e-10114
anatomical conduit1.57e-09122
anterior neural tube4.44e-0840
brain grey matter5.67e-0829
regional part of telencephalon5.67e-0829
telencephalon5.67e-0829
compound organ5.74e-0843
primary circulatory organ7.12e-0818
heart7.12e-0818
primitive heart tube7.12e-0818
primary heart field7.12e-0818
anterior lateral plate mesoderm7.12e-0818
heart tube7.12e-0818
heart primordium7.12e-0818
cardiac mesoderm7.12e-0818
cardiogenic plate7.12e-0818
heart rudiment7.12e-0818
ectoderm-derived structure1.27e-0795
ectoderm1.27e-0795
presumptive ectoderm1.27e-0795
regional part of forebrain1.52e-0739
forebrain1.52e-0739
future forebrain1.52e-0739
posterior neural tube1.85e-0712
chordal neural plate1.85e-0712
cardiovascular system2.42e-0723
circulatory system2.42e-0723
ecto-epithelium9.79e-0773
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