FFCP PHASE1:Mm9::chr4:114079322..114079338,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=666048 | |EntrezGene=666048 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=B1ATG9 | |UniProt=B1ATG9 | ||
|association_with_transcript=0bp_to_ENSMUST00000094894,NM_001085549,uc008ueb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000094894,NM_001085549,uc008ueb.1_5end | ||
|cluster_id=chr4:114079322..114079338,+ | |||
|description=CAGE_peak_3_at_Gm12824_5end | |description=CAGE_peak_3_at_Gm12824_5end | ||
|id=chr4:114079322..114079338,+ | |id=chr4:114079322..114079338,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.19e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.07e-08!14;UBERON:0000117!3.07e-08!14;UBERON:0000171!3.07e-08!14;UBERON:0000170!3.07e-08!14;UBERON:0005597!3.07e-08!14;UBERON:0000118!3.07e-08!14;UBERON:0005153!3.64e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.91e-12,14;UBERON:0000117,6.91e-12,14;UBERON:0000171,6.91e-12,14;UBERON:0000170,6.91e-12,14;UBERON:0005597,6.91e-12,14;UBERON:0000118,6.91e-12,14;UBERON:0005153,5.33e-09,17;UBERON:0005178,5.33e-09,17;UBERON:0005181,5.33e-09,17;UBERON:0002224,5.33e-09,17;UBERON:0000915,5.33e-09,17;UBERON:0008947,5.33e-09,17;UBERON:0003258,5.33e-09,17;UBERON:0005157,5.08e-07,20 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,1.09012578190223,3.29529274101708,6.9994763666742,7.13930750289349,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,2.39680088414724,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0,0.559198337475902,0.227178579999552,0.453429360640713,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0.259786004602869,0.35333957451034,0.563373679106722,20.5322363862909,35.6727335589304,92.4386714099331,0,0,0,1.02765491747154,0.258937883647172,0.148442139064825,1.21439728736295,0,0.461230994512117,0,0.352766121407114,0.251333182659351,0.247194967734374,1.87979163995885,0,2.75003644910596,0.662524555381181,1.45462575940567,0,1.46390398505774,2.51336048176146,0,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0.162241263067758,0.407357455401265,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,1.58356011747554,0.876782929710299,2.78047249225598,3.48252166522167,2.26360350048738,0.796137067273973,0,0,0,2.07125772535502,0.938104239924385,1.08037236876609,0.473489471170421,0.787056926989615,0.925602677324269,1.86027155800326,1.87791380979733,3.38619492864792,3.94943639792353,1.14917224855367,5.26947262048062,3.21639972335731,5.92785311285837,6.03928884421673,0.210289948564127,0,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.948339504765408,2.74196430263349,4.50830942692322,2.64746726198909,3.29719228184964,2.17421041659988,5.43834219268613,6.34723636312289,3.1399745568275,1.97435462274881,0,1.16791574001266,0.196558995113203,0,0,0.241177159752417,0,1.15078454980324,0,0,0,0,0,0,0.179397413521912,0,1.66277871149944,1.32643988239339,3.09633455239849,3.90413697282933,4.22442446919304,6.365237782789,3.80869825417622,1.75620283072019,5.2019597555043,3.76489972402917,4.30527875375215,1.14704320301017,1.89953480052485,1.15719246865209,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,2.29508923527346,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.668396022247182,2.26461224631066,0,0,0,0,1.41940085208269,0.534196811001766,0.81443479676788,0.824850614862677,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.532020700926821,3.38900753443934,0.987294123612726,1.522324745573,0.23467170806371,0,0.441056796109924,4.122156323537,3.22928853391811,2.83470747162333,1.3130957840345,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.330613822901344,0.523511883968059,0,0,0,0.897099276263873,0.496375471371293,1.94451188344048,2.19571699912143,1.35164900392623,0.234714477291508,0.781226309063701,0.104859344425711,0.241584120826006,0,0.316011120628178,1.41907650703115,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0.0962118416403295,0,0.906921534460845,0,0,0,0.772758376128762,1.12609485270709,3.47988086107804,2.57242054894879,0,0,0,1.14579102687879,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.682934423016537,1.94485373654635,0.419226325255965,1.47074806760011,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.01391719956096,0.754505365544305,1.31098110457835,1.15245274328765,1.20614484806788,0.476293691283074,1.0429589335037,1.35036454324594,0.824171801606613,1.17759136107518,1.71434626192708,1.4198064492747,0.953744759789284,0.872078499793971,1.69396884747595,1.09998990259179,1.09756783723664,0.789209134313529,0.814824683075171,2.24456908663095,0.830445126869219,1.28055827088233,1.22769312950907,2.16911577660352,0.964533054905707,0.499621155875892,1.40358965067245,1.28922632428979,0.956441660344217,1.32354851471709,1.15933917810211 | |phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,1.56478268869608,1.09012578190223,3.29529274101708,6.9994763666742,7.13930750289349,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,2.39680088414724,1.15265491596466,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.45839474333043,0.294628585473668,0,0.559198337475902,0.227178579999552,0.453429360640713,0.289864488701678,0,0,0,0,0,0.983110940922263,0,0.259786004602869,0.35333957451034,0.563373679106722,20.5322363862909,35.6727335589304,92.4386714099331,0,0,0,1.02765491747154,0.258937883647172,0.148442139064825,1.21439728736295,0,0.461230994512117,0,0.352766121407114,0.251333182659351,0.247194967734374,1.87979163995885,0,2.75003644910596,0.662524555381181,1.45462575940567,0,1.46390398505774,2.51336048176146,0,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.767146371990992,0,0.162241263067758,0.407357455401265,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.272145996605311,0.384341160854549,0.187403449119458,0.258703370739016,0,0.189106080167819,1.58356011747554,0.876782929710299,2.78047249225598,3.48252166522167,2.26360350048738,0.796137067273973,0,0,0,2.07125772535502,0.938104239924385,1.08037236876609,0.473489471170421,0.787056926989615,0.925602677324269,1.86027155800326,1.87791380979733,3.38619492864792,3.94943639792353,1.14917224855367,5.26947262048062,3.21639972335731,5.92785311285837,6.03928884421673,0.210289948564127,0,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.948339504765408,2.74196430263349,4.50830942692322,2.64746726198909,3.29719228184964,2.17421041659988,5.43834219268613,6.34723636312289,3.1399745568275,1.97435462274881,0,1.16791574001266,0.196558995113203,0,0,0.241177159752417,0,1.15078454980324,0,0,0,0,0,0,0.179397413521912,0,1.66277871149944,1.32643988239339,3.09633455239849,3.90413697282933,4.22442446919304,6.365237782789,3.80869825417622,1.75620283072019,5.2019597555043,3.76489972402917,4.30527875375215,1.14704320301017,1.89953480052485,1.15719246865209,0,0,0.983528546038072,0.827810238914197,0,0.117211686592203,2.29508923527346,0.504941854408746,0,0,0.430846795465598,0.238968797952552,0.668396022247182,2.26461224631066,0,0,0,0,1.41940085208269,0.534196811001766,0.81443479676788,0.824850614862677,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,0.857348140126369,0.532020700926821,3.38900753443934,0.987294123612726,1.522324745573,0.23467170806371,0,0.441056796109924,4.122156323537,3.22928853391811,2.83470747162333,1.3130957840345,0.656563598980245,0.291480836629851,0,0,0.206386867963223,0.555583582109135,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.330613822901344,0.523511883968059,0,0,0,0.897099276263873,0.496375471371293,1.94451188344048,2.19571699912143,1.35164900392623,0.234714477291508,0.781226309063701,0.104859344425711,0.241584120826006,0,0.316011120628178,1.41907650703115,0.410843828659309,0.389762468933385,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0.0962118416403295,0,0.906921534460845,0,0,0,0.772758376128762,1.12609485270709,3.47988086107804,2.57242054894879,0,0,0,1.14579102687879,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.682934423016537,1.94485373654635,0.419226325255965,1.47074806760011,0.44449345560323,2.06035057238894,1.60459604795908,1.01078884705519,1.01391719956096,0.754505365544305,1.31098110457835,1.15245274328765,1.20614484806788,0.476293691283074,1.0429589335037,1.35036454324594,0.824171801606613,1.17759136107518,1.71434626192708,1.4198064492747,0.953744759789284,0.872078499793971,1.69396884747595,1.09998990259179,1.09756783723664,0.789209134313529,0.814824683075171,2.24456908663095,0.830445126869219,1.28055827088233,1.22769312950907,2.16911577660352,0.964533054905707,0.499621155875892,1.40358965067245,1.28922632428979,0.956441660344217,1.32354851471709,1.15933917810211 | ||
|short_description=p3@Gm12824 | |short_description=p3@Gm12824 | ||
}} | }} |
Latest revision as of 04:19, 26 September 2015
Short description: | p3@Gm12824 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm12824_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000094894, NM_001085549, uc008ueb.1_5end |
EntrezGene: | Gm12824 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.19e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung | 6.91e-12 | 14 |
respiratory tube | 6.91e-12 | 14 |
respiration organ | 6.91e-12 | 14 |
pair of lungs | 6.91e-12 | 14 |
lung primordium | 6.91e-12 | 14 |
lung bud | 6.91e-12 | 14 |
epithelial bud | 5.33e-09 | 17 |
thoracic cavity element | 5.33e-09 | 17 |
thoracic segment organ | 5.33e-09 | 17 |
thoracic cavity | 5.33e-09 | 17 |
thoracic segment of trunk | 5.33e-09 | 17 |
respiratory primordium | 5.33e-09 | 17 |
endoderm of foregut | 5.33e-09 | 17 |
epithelial fold | 5.08e-07 | 20 |