FFCP PHASE1:Hg19::chr13:111836521..111836524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111836521..111836524,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr13:111836521..111836524,+ | |description=CAGE_peak_at_chr13:111836521..111836524,+ | ||
|id=chr13:111836521..111836524,+ | |id=chr13:111836521..111836524,+ | ||
|ontology_enrichment_celltype=CL:0000542!6.17e-58!53;CL:0000051!6.17e-58!53;CL:0000838!1.46e-55!52;CL:0000945!4.59e-49!24;CL:0000826!4.59e-49!24;CL:0000738!4.03e-36!140;CL:0002087!1.70e-31!119;CL:0000236!6.78e-30!14;CL:0000037!7.78e-27!172;CL:0000566!7.78e-27!172;CL:0000988!1.31e-24!182;CL:0002031!2.14e-23!124;CL:0002032!1.60e-20!165;CL:0000837!1.60e-20!165;CL:0000624!2.11e-10!6;CL:0000084!1.15e-09!25;CL:0000827!1.15e-09!25;CL:0000791!1.47e-09!18;CL:0000789!1.47e-09!18;CL:0002420!1.47e-09!18;CL:0002419!1.47e-09!18;CL:0000790!1.47e-09!18;CL:0000817!1.80e-09!3;CL:0000767!1.72e-08!3;CL:0000842!2.10e-08!3;CL:0000784!3.22e-08!3;CL:0000623!5.54e-08!3;CL:0000825!5.54e-08!3;CL:0000785!6.97e-07!2;CL:0000955!6.97e-07!2;CL:0000818!6.97e-07!2;CL:0000954!6.97e-07!2;CL:0000816!6.97e-07!2 | |ontology_enrichment_celltype=CL:0000542!6.17e-58!53;CL:0000051!6.17e-58!53;CL:0000838!1.46e-55!52;CL:0000945!4.59e-49!24;CL:0000826!4.59e-49!24;CL:0000738!4.03e-36!140;CL:0002087!1.70e-31!119;CL:0000236!6.78e-30!14;CL:0000037!7.78e-27!172;CL:0000566!7.78e-27!172;CL:0000988!1.31e-24!182;CL:0002031!2.14e-23!124;CL:0002032!1.60e-20!165;CL:0000837!1.60e-20!165;CL:0000624!2.11e-10!6;CL:0000084!1.15e-09!25;CL:0000827!1.15e-09!25;CL:0000791!1.47e-09!18;CL:0000789!1.47e-09!18;CL:0002420!1.47e-09!18;CL:0002419!1.47e-09!18;CL:0000790!1.47e-09!18;CL:0000817!1.80e-09!3;CL:0000767!1.72e-08!3;CL:0000842!2.10e-08!3;CL:0000784!3.22e-08!3;CL:0000623!5.54e-08!3;CL:0000825!5.54e-08!3;CL:0000785!6.97e-07!2;CL:0000955!6.97e-07!2;CL:0000818!6.97e-07!2;CL:0000954!6.97e-07!2;CL:0000816!6.97e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.22e-54;24!CL:0000236;2.51e-28;13!CL:0000542;5.87e-28;53!CL:0000767;1.73e-14;3!CL:0002087;6.36e-09;104!CL:0000226;5.72e-07;3!CL:0000784;5.72e-07;3!CL:0000842;5.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.33e-55,24;CL:0000826,4.33e-55,24;CL:0000542,8.45e-47,53;CL:0000051,8.45e-47,53;CL:0000838,1.58e-43,52;CL:0000236,6.83e-33,14;CL:0000738,1.42e-28,136;CL:0002087,5.75e-22,115;CL:0000037,7.86e-22,168;CL:0000988,2.27e-20,177;CL:0000817,5.63e-16,3;CL:0002031,1.25e-15,120;CL:0002032,2.37e-15,161;CL:0000837,2.37e-15,161;CL:0000767,3.41e-14,3;CL:0000785,2.84e-11,2;CL:0000955,2.84e-11,2;CL:0000818,2.84e-11,2;CL:0000954,2.84e-11,2;CL:0000816,2.84e-11,2;CL:0000226,4.91e-07,3;CL:0000842,4.91e-07,3;CL:0000784,5.06e-07,3;CL:0000134,9.38e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;5.87e-28;53!CL:0000954;2.90e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.73e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.01e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.97e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.78e-12!7;UBERON:0002106!1.95e-08!3;UBERON:0004854!1.95e-08!3;UBERON:0009034!1.95e-08!3;UBERON:0002095!1.95e-08!3;UBERON:0004782!1.95e-08!3;UBERON:0003281!1.95e-08!3;UBERON:0009664!1.95e-08!3;UBERON:0002296!1.95e-08!3;UBERON:0005602!1.95e-08!3;UBERON:0001179!1.95e-08!3;UBERON:0006293!1.95e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;6.10e-09;5!UBERON:0005057;6.10e-09;5!UBERON:0002106;3.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.49e-07,3;UBERON:0004854,3.49e-07,3;UBERON:0009034,3.49e-07,3;UBERON:0002095,3.49e-07,3;UBERON:0004782,3.49e-07,3;UBERON:0003281,3.49e-07,3;UBERON:0009664,3.49e-07,3;UBERON:0002296,3.49e-07,3;UBERON:0005602,3.49e-07,3;UBERON:0001179,3.49e-07,3;UBERON:0006293,3.49e-07,3 | |||
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| ||
|short_description=p@chr13:111836521..111836524,+ | |short_description=p@chr13:111836521..111836524,+ | ||
}} | }} |
Latest revision as of 14:37, 24 July 2015
Short description: | p@chr13:111836521..111836524, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111836521..111836524, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.33e-55 | 24 |
pro-B cell | 4.33e-55 | 24 |
lymphocyte | 8.45e-47 | 53 |
common lymphoid progenitor | 8.45e-47 | 53 |
lymphoid lineage restricted progenitor cell | 1.58e-43 | 52 |
B cell | 6.83e-33 | 14 |
leukocyte | 1.42e-28 | 136 |
nongranular leukocyte | 5.75e-22 | 115 |
hematopoietic stem cell | 7.86e-22 | 168 |
hematopoietic cell | 2.27e-20 | 177 |
precursor B cell | 5.63e-16 | 3 |
hematopoietic lineage restricted progenitor cell | 1.25e-15 | 120 |
hematopoietic oligopotent progenitor cell | 2.37e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-15 | 161 |
basophil | 3.41e-14 | 3 |
mature B cell | 2.84e-11 | 2 |
pre-B-II cell | 2.84e-11 | 2 |
transitional stage B cell | 2.84e-11 | 2 |
small pre-B-II cell | 2.84e-11 | 2 |
immature B cell | 2.84e-11 | 2 |
single nucleate cell | 4.91e-07 | 3 |
mononuclear cell | 4.91e-07 | 3 |
plasmacytoid dendritic cell | 5.06e-07 | 3 |
mesenchymal cell | 9.38e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.49e-07 | 3 |
gastrointestinal system mesentery | 3.49e-07 | 3 |
stomach region | 3.49e-07 | 3 |
mesentery | 3.49e-07 | 3 |
gastrointestinal system serosa | 3.49e-07 | 3 |
mesentery of stomach | 3.49e-07 | 3 |
gut mesentery | 3.49e-07 | 3 |
dorsal mesentery | 3.49e-07 | 3 |
dorsal mesogastrium | 3.49e-07 | 3 |
peritoneal cavity | 3.49e-07 | 3 |
spleen primordium | 3.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.97e-12 | 10 |