FFCP PHASE1:Mm9::chr11:118770953..118771053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52897 | |EntrezGene=52897 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BIF2,A2A4W7,D1GI07,Q8VI61 | |UniProt=Q8BIF2,A2A4W7,D1GI07,Q8VI61 | ||
|association_with_transcript=-67bp_to_ENSMUST00000017576,ENSMUST00000106279,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end | |association_with_transcript=-67bp_to_ENSMUST00000017576,ENSMUST00000106279,NM_001024931,NM_001039167,NM_001039168,uc007mpl.1,uc007mpm.1,uc007mpn.1,uc007mpo.1_5end | ||
|cluster_id=chr11:118770953..118771053,- | |||
|description=CAGE_peak_2_at_Rbfox3_5end | |description=CAGE_peak_2_at_Rbfox3_5end | ||
|id=chr11:118770953..118771053,- | |id=chr11:118770953..118771053,- | ||
|ontology_enrichment_celltype=CL:0000540!4.36e-14!33;CL:0000047!4.36e-14!33;CL:0000031!4.36e-14!33;CL:0000404!4.36e-14!33;CL:0000117!6.79e-14!23;CL:0000337!6.79e-14!23;CL:0000221!5.10e-12!44;CL:0000133!5.10e-12!44;CL:0002319!7.62e-12!43;CL:0000393!4.90e-10!39;CL:0000211!4.90e-10!39;CL:0000055!2.50e-08!50 | |ontology_enrichment_celltype=CL:0000540!4.36e-14!33;CL:0000047!4.36e-14!33;CL:0000031!4.36e-14!33;CL:0000404!4.36e-14!33;CL:0000117!6.79e-14!23;CL:0000337!6.79e-14!23;CL:0000221!5.10e-12!44;CL:0000133!5.10e-12!44;CL:0002319!7.62e-12!43;CL:0000393!4.90e-10!39;CL:0000211!4.90e-10!39;CL:0000055!2.50e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-17,23;CL:0000337,1.34e-17,23;CL:0000540,9.20e-15,33;CL:0000047,9.20e-15,33;CL:0000031,9.20e-15,33;CL:0000404,9.20e-15,33;CL:0000393,6.14e-11,39;CL:0000211,6.14e-11,39;CL:0000221,6.50e-10,44;CL:0000133,6.50e-10,44;CL:0002319,1.09e-09,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.10e-31!73;UBERON:0005743!8.10e-31!73;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0002346!5.38e-27!71;UBERON:0003075!5.38e-27!71;UBERON:0007284!5.38e-27!71;UBERON:0004121!2.26e-25!102;UBERON:0000924!2.26e-25!102;UBERON:0006601!2.26e-25!102;UBERON:0001049!4.27e-25!52;UBERON:0005068!4.27e-25!52;UBERON:0006241!4.27e-25!52;UBERON:0007135!4.27e-25!52;UBERON:0000033!3.17e-24!63;UBERON:0000955!1.36e-23!50;UBERON:0006238!1.36e-23!50;UBERON:0002616!8.08e-23!49;UBERON:0003056!8.31e-21!49;UBERON:0002020!9.68e-20!34;UBERON:0003080!5.62e-19!40;UBERON:0002780!2.74e-18!39;UBERON:0001890!2.74e-18!39;UBERON:0006240!2.74e-18!39;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0007811!3.99e-11!86;UBERON:0000153!9.01e-10!94;UBERON:0002619!1.12e-09!17;UBERON:0002021!9.74e-09!10;UBERON:0000411!9.74e-09!10;UBERON:0001950!9.74e-09!10 | |ontology_enrichment_uberon=UBERON:0001017!8.10e-31!73;UBERON:0005743!8.10e-31!73;UBERON:0000073!3.78e-30!75;UBERON:0001016!3.78e-30!75;UBERON:0002346!5.38e-27!71;UBERON:0003075!5.38e-27!71;UBERON:0007284!5.38e-27!71;UBERON:0004121!2.26e-25!102;UBERON:0000924!2.26e-25!102;UBERON:0006601!2.26e-25!102;UBERON:0001049!4.27e-25!52;UBERON:0005068!4.27e-25!52;UBERON:0006241!4.27e-25!52;UBERON:0007135!4.27e-25!52;UBERON:0000033!3.17e-24!63;UBERON:0000955!1.36e-23!50;UBERON:0006238!1.36e-23!50;UBERON:0002616!8.08e-23!49;UBERON:0003056!8.31e-21!49;UBERON:0002020!9.68e-20!34;UBERON:0003080!5.62e-19!40;UBERON:0002780!2.74e-18!39;UBERON:0001890!2.74e-18!39;UBERON:0006240!2.74e-18!39;UBERON:0002791!2.13e-16!29;UBERON:0003528!2.13e-16!29;UBERON:0001893!2.13e-16!29;UBERON:0000956!8.06e-12!21;UBERON:0001869!8.06e-12!21;UBERON:0000203!8.06e-12!21;UBERON:0007811!3.99e-11!86;UBERON:0000153!9.01e-10!94;UBERON:0002619!1.12e-09!17;UBERON:0002021!9.74e-09!10;UBERON:0000411!9.74e-09!10;UBERON:0001950!9.74e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.86e-30,73;UBERON:0000073,3.91e-30,54;UBERON:0002346,1.68e-29,64;UBERON:0003075,1.68e-29,64;UBERON:0007284,1.68e-29,64;UBERON:0001016,4.88e-29,75;UBERON:0001049,1.57e-28,52;UBERON:0005068,1.57e-28,52;UBERON:0006241,1.57e-28,52;UBERON:0007135,1.57e-28,52;UBERON:0004121,2.35e-25,95;UBERON:0000924,2.35e-25,95;UBERON:0006601,2.35e-25,95;UBERON:0010371,3.66e-25,73;UBERON:0002020,6.33e-25,34;UBERON:0000955,3.39e-24,47;UBERON:0006238,3.39e-24,47;UBERON:0002616,3.02e-23,46;UBERON:0003056,2.48e-22,49;UBERON:0003080,2.60e-21,40;UBERON:0003528,1.40e-20,29;UBERON:0002791,1.40e-20,29;UBERON:0001893,1.40e-20,29;UBERON:0002780,1.91e-20,39;UBERON:0001890,1.91e-20,39;UBERON:0006240,1.91e-20,39;UBERON:0010314,8.81e-16,92;UBERON:0000956,1.25e-14,21;UBERON:0001869,1.25e-14,21;UBERON:0000203,1.25e-14,21;UBERON:0002619,7.59e-12,17;UBERON:0002021,6.80e-11,10;UBERON:0000411,6.80e-11,10;UBERON:0001950,6.80e-11,10;UBERON:0003076,1.22e-07,12;UBERON:0003057,1.22e-07,12;UBERON:0002420,3.97e-07,8;UBERON:0007245,3.97e-07,8;UBERON:0010009,3.97e-07,8;UBERON:0010011,3.97e-07,8;UBERON:0000454,3.97e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1377056468904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,15.9830004079082,15.340738398889,15.2119536841483,0,0,0,0,0,0.599200221036809,0.768436610643109,9.95420278161385,13.095576018174,11.1472229516232,36.8489769880907,29.5963844875162,9.92175473641128,8.62609239164127,15.6267193723704,20.9220173898839,27.5804650264005,21.3513081226178,14.7712642257817,16.6507511356386,17.1901412283731,25.4056529091257,14.6318278608237,25.6701056265041,31.8198872311561,30.8946547334053,28.1463163196204,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.59857431606684,0,0.593768556259299,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,173.326231830836,223.68908287677,0,0,0,0,34.9012189813237,54.4425717354165,15.5811396619952,76.6565252047939,91.290418266928,26.5968697036237,49.9703090248694,0.81471491080253,1.8661045591514,0.505445516867349,2.10441855886474,0.260240885925407,0.689706313300419,1.80062129805349,3.31550599238573,2.4493139694478,1.92170580427275,2.99845518591132,7.24369438069244,2.58681591519411,2.64748512234947,0.351902248327898,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,64.7693041577512,22.3303008863047,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0,0.397912944082302,1.36474860983384,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,23.7614873181932,31.0610969469338,0,0,1.57754109708128,0.780877488593277,1.93881057959519,0.477937595905104,0.222798674082394,1.13230612315533,0.809621403349789,1.16902343164525,1.18586333383957,74.2252240934374,0.567760340833074,0,0.162886959353576,1.81467135269789,0,0.971122544619926,0.604647113929502,0,0,0.922305443831782,0,0.727067458955011,0,0,0,0,3.06395645178409,0.36012218806262,0.646793418913773,0.857348140126369,1.24138163549592,1.78368817602071,1.48094118541909,2.13125464380219,0,0,4.41056796109924,0,0,0,0,0,0,32.4494278518392,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.42323626988794,0.756037385752609,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,19.7053385912834,1.12609485270709,4.76194223094889,0.643105137237198,11.5361583928134,119.727390634818,91.6047220649282,89.9445956099853,71.490923854974,72.6187470956881,103.488963942389,75.6025200259622,73.8526773287722,70.2370733925517,79.7350880097803,1.03787347584177,3.19219898720825,3.24393850932855,2.43106717068294,2.51535795153579,3.12533964365024,2.889207461421,3.91466608753899,3.53011130550997,1.76888048234658,4.30914809813408,3.77252682772152,3.09016974650612,3.9695594491019,4.25022470271538,4.76293691283074,3.01299247456624,3.6652751888104,6.1812885120496,3.53277408322554,2.40008476669791,3.37204031702741,2.14592570952589,4.21504608233753,3.01150017329058,3.63842813934209,3.29270351170991,3.15683653725411,3.93831930152999,3.36685362994643,3.44041552560105,3.34915240076916,2.45538625901814,3.25367366490529,2.3148793317737,8.49355964989016,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,0.463735671240843 | |phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1377056468904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0,0,0,15.9830004079082,15.340738398889,15.2119536841483,0,0,0,0,0,0.599200221036809,0.768436610643109,9.95420278161385,13.095576018174,11.1472229516232,36.8489769880907,29.5963844875162,9.92175473641128,8.62609239164127,15.6267193723704,20.9220173898839,27.5804650264005,21.3513081226178,14.7712642257817,16.6507511356386,17.1901412283731,25.4056529091257,14.6318278608237,25.6701056265041,31.8198872311561,30.8946547334053,28.1463163196204,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.24711072210803,0,0,0,1.54927761754349,0,0,0,0,0,0,1.59857431606684,0,0.593768556259299,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,173.326231830836,223.68908287677,0,0,0,0,34.9012189813237,54.4425717354165,15.5811396619952,76.6565252047939,91.290418266928,26.5968697036237,49.9703090248694,0.81471491080253,1.8661045591514,0.505445516867349,2.10441855886474,0.260240885925407,0.689706313300419,1.80062129805349,3.31550599238573,2.4493139694478,1.92170580427275,2.99845518591132,7.24369438069244,2.58681591519411,2.64748512234947,0.351902248327898,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,64.7693041577512,22.3303008863047,0,0.528901133327089,0.213288250535234,0.232236671860439,0.38660238396628,0.80673409849337,0.667134131534611,0.380451252225118,0,0.329397909448022,0,0.397912944082302,1.36474860983384,0,0,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0.140271639780637,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,23.7614873181932,31.0610969469338,0,0,1.57754109708128,0.780877488593277,1.93881057959519,0.477937595905104,0.222798674082394,1.13230612315533,0.809621403349789,1.16902343164525,1.18586333383957,74.2252240934374,0.567760340833074,0,0.162886959353576,1.81467135269789,0,0.971122544619926,0.604647113929502,0,0,0.922305443831782,0,0.727067458955011,0,0,0,0,3.06395645178409,0.36012218806262,0.646793418913773,0.857348140126369,1.24138163549592,1.78368817602071,1.48094118541909,2.13125464380219,0,0,4.41056796109924,0,0,0,0,0,0,32.4494278518392,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,1.42323626988794,0.756037385752609,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0,0,0,1.69107881605257,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.419437377702843,0.241584120826006,0.576060012515731,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,19.7053385912834,1.12609485270709,4.76194223094889,0.643105137237198,11.5361583928134,119.727390634818,91.6047220649282,89.9445956099853,71.490923854974,72.6187470956881,103.488963942389,75.6025200259622,73.8526773287722,70.2370733925517,79.7350880097803,1.03787347584177,3.19219898720825,3.24393850932855,2.43106717068294,2.51535795153579,3.12533964365024,2.889207461421,3.91466608753899,3.53011130550997,1.76888048234658,4.30914809813408,3.77252682772152,3.09016974650612,3.9695594491019,4.25022470271538,4.76293691283074,3.01299247456624,3.6652751888104,6.1812885120496,3.53277408322554,2.40008476669791,3.37204031702741,2.14592570952589,4.21504608233753,3.01150017329058,3.63842813934209,3.29270351170991,3.15683653725411,3.93831930152999,3.36685362994643,3.44041552560105,3.34915240076916,2.45538625901814,3.25367366490529,2.3148793317737,8.49355964989016,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,0.463735671240843 | ||
|short_description=p2@Rbfox3 | |short_description=p2@Rbfox3 | ||
}} | }} |
Latest revision as of 02:01, 27 September 2015
Short description: | p2@Rbfox3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rbfox3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -67bp_to_ENSMUST00000017576, ENSMUST00000106279, NM_001024931, NM_001039167, NM_001039168, uc007mpl.1, uc007mpm.1, uc007mpn.1, uc007mpo.1_5end |
EntrezGene: | Rbfox3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-17 | 23 |
neuron | 9.20e-15 | 33 |
neuronal stem cell | 9.20e-15 | 33 |
neuroblast | 9.20e-15 | 33 |
electrically signaling cell | 9.20e-15 | 33 |
electrically responsive cell | 6.14e-11 | 39 |
electrically active cell | 6.14e-11 | 39 |
ectodermal cell | 6.50e-10 | 44 |
neurectodermal cell | 6.50e-10 | 44 |
neural cell | 1.09e-09 | 43 |