FFCP PHASE1:Mm9::chr11:115993887..115993898,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=397 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:115993887..115993898,- | |||
|description=CAGE_peak_at_chr11:115993887..115993898,- | |description=CAGE_peak_at_chr11:115993887..115993898,- | ||
|id=chr11:115993887..115993898,- | |id=chr11:115993887..115993898,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.06e-18,3;CL:0000066,3.72e-08,25;CL:0000473,3.85e-08,7;CL:0000213,2.43e-07,1;CL:0002078,2.43e-07,1;CL:0000115,2.43e-07,1;CL:0002262,2.43e-07,1;CL:1000398,2.43e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.63e-11!29;UBERON:0002193!1.00e-10!48;UBERON:0003408!1.43e-10!24;UBERON:0006562!1.99e-10!24;UBERON:0001557!1.99e-10!24;UBERON:0001042!1.99e-10!24;UBERON:0008814!1.99e-10!24;UBERON:0009145!1.99e-10!24;UBERON:0000072!3.59e-10!27;UBERON:0002370!1.29e-09!23;UBERON:0000974!1.29e-09!23;UBERON:0004807!1.29e-09!23;UBERON:0005058!1.29e-09!23;UBERON:0003351!1.29e-09!23;UBERON:0009113!1.29e-09!23;UBERON:0003295!1.29e-09!23;UBERON:0009722!1.29e-09!23;UBERON:0005562!1.29e-09!23;UBERON:0007690!1.29e-09!23;UBERON:0000063!4.73e-09!35;UBERON:0001004!1.81e-08!42;UBERON:0002390!4.17e-08!45;UBERON:0003061!4.17e-08!45;UBERON:0000065!9.91e-08!41 | |ontology_enrichment_uberon=UBERON:0004177!1.63e-11!29;UBERON:0002193!1.00e-10!48;UBERON:0003408!1.43e-10!24;UBERON:0006562!1.99e-10!24;UBERON:0001557!1.99e-10!24;UBERON:0001042!1.99e-10!24;UBERON:0008814!1.99e-10!24;UBERON:0009145!1.99e-10!24;UBERON:0000072!3.59e-10!27;UBERON:0002370!1.29e-09!23;UBERON:0000974!1.29e-09!23;UBERON:0004807!1.29e-09!23;UBERON:0005058!1.29e-09!23;UBERON:0003351!1.29e-09!23;UBERON:0009113!1.29e-09!23;UBERON:0003295!1.29e-09!23;UBERON:0009722!1.29e-09!23;UBERON:0005562!1.29e-09!23;UBERON:0007690!1.29e-09!23;UBERON:0000063!4.73e-09!35;UBERON:0001004!1.81e-08!42;UBERON:0002390!4.17e-08!45;UBERON:0003061!4.17e-08!45;UBERON:0000065!9.91e-08!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.93e-19,3;UBERON:0001962,1.38e-13,2;UBERON:0001961,1.38e-13,2;UBERON:0001744,1.38e-13,2;UBERON:0003199,1.20e-07,1;UBERON:0001153,2.11e-07,1;UBERON:0001045,2.11e-07,1;UBERON:0002394,2.43e-07,1;UBERON:0001281,2.43e-07,1;UBERON:0000353,2.43e-07,1;UBERON:0003497,2.43e-07,1;UBERON:0003909,2.43e-07,1;UBERON:0003928,2.43e-07,1;UBERON:0003835,2.43e-07,1;UBERON:0003513,2.43e-07,1;UBERON:0001280,2.43e-07,1;UBERON:0004647,2.43e-07,1;UBERON:0002294,2.43e-07,1;UBERON:0001173,2.43e-07,1;UBERON:0004912,2.43e-07,1;UBERON:0005171,2.43e-07,1;UBERON:0000029,3.20e-07,1;UBERON:0001097,3.20e-07,1;UBERON:0003968,3.20e-07,1;UBERON:0001467,3.20e-07,1;UBERON:0002193,4.47e-07,48;UBERON:0002405,4.47e-07,48 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,0,0,0.503637815735669,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,5.43974237497583,6.42345986988076,1.14846392823004,1.29228598847722,2.80112602491656,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.512612642393558,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.718976700153791,0.77952493786677,0.895133478337407,1.58945083825012,0.841368146639782,1.03382669022204,0.403865799792591,0.685861259894999,0.604957110821043,0.974578807397524,1.05833025804362,1.05189211963412,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,0.909998478779072,0,0,0.503637815735669,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.0850432901510698,0,0,5.43974237497583,6.42345986988076,1.14846392823004,1.29228598847722,2.80112602491656,0,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0.505524445014783,0,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0.209446706813455,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0.221464689648775,0,0,0,0,0,0.54390568381871,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.512612642393558,0,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.405450430580328,0.718976700153791,0.77952493786677,0.895133478337407,1.58945083825012,0.841368146639782,1.03382669022204,0.403865799792591,0.685861259894999,0.604957110821043,0.974578807397524,1.05833025804362,1.05189211963412,0.226730383615211,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:115993887..115993898,- | |short_description=p@chr11:115993887..115993898,- | ||
}} | }} |
Latest revision as of 11:42, 5 August 2015
Short description: | p@chr11:115993887..115993898, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:115993887..115993898, - |
Coexpression cluster: | MCL_coexpression_mm9:397 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.06e-18 | 3 |
epithelial cell | 3.72e-08 | 25 |
defensive cell | 3.85e-08 | 7 |
lining cell | 2.43e-07 | 1 |
meso-epithelial cell | 2.43e-07 | 1 |
endothelial cell | 2.43e-07 | 1 |
endothelial cell of sinusoid | 2.43e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.93e-19 | 3 |
gut-associated lymphoid tissue | 1.38e-13 | 2 |
mucosa-associated lymphoid tissue | 1.38e-13 | 2 |
lymphoid tissue | 1.38e-13 | 2 |
egg chamber | 1.20e-07 | 1 |
caecum | 2.11e-07 | 1 |
midgut | 2.11e-07 | 1 |
bile duct | 2.43e-07 | 1 |
hepatic sinusoid | 2.43e-07 | 1 |
parenchyma | 2.43e-07 | 1 |
abdomen blood vessel | 2.43e-07 | 1 |
sinusoid | 2.43e-07 | 1 |
digestive system duct | 2.43e-07 | 1 |
abdominal segment blood vessel | 2.43e-07 | 1 |
trunk blood vessel | 2.43e-07 | 1 |
liver parenchyma | 2.43e-07 | 1 |
liver lobule | 2.43e-07 | 1 |
biliary system | 2.43e-07 | 1 |
biliary tree | 2.43e-07 | 1 |
biliary bud | 2.43e-07 | 1 |
hepatic duct | 2.43e-07 | 1 |
lymph node | 3.20e-07 | 1 |
axillary lymph node | 3.20e-07 | 1 |
peripheral lymph node | 3.20e-07 | 1 |
shoulder | 3.20e-07 | 1 |
hemolymphoid system | 4.47e-07 | 48 |
immune system | 4.47e-07 | 48 |