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FFCP PHASE1:Mm9::chr1:32229556..32229637,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170771
|EntrezGene=170771
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q9WU01
|UniProt=Q9WU01
|association_with_transcript=-13bp_to_ENSMUST00000027226,NM_133235,uc007ann.1,uc007ano.1,uc007anp.1_5end
|association_with_transcript=-13bp_to_ENSMUST00000027226,NM_133235,uc007ann.1,uc007ano.1,uc007anp.1_5end
|cluster_id=chr1:32229556..32229637,+
|description=CAGE_peak_1_at_Khdrbs2_5end
|description=CAGE_peak_1_at_Khdrbs2_5end
|id=chr1:32229556..32229637,+
|id=chr1:32229556..32229637,+
|ontology_enrichment_celltype=CL:0000540!1.57e-16!33;CL:0000047!1.57e-16!33;CL:0000031!1.57e-16!33;CL:0000404!1.57e-16!33;CL:0000117!2.74e-15!23;CL:0000337!2.74e-15!23;CL:0000221!3.76e-11!44;CL:0000133!3.76e-11!44;CL:0000393!5.64e-11!39;CL:0000211!5.64e-11!39;CL:0002319!6.04e-11!43;CL:0000055!6.16e-07!50
|ontology_enrichment_celltype=CL:0000540!1.57e-16!33;CL:0000047!1.57e-16!33;CL:0000031!1.57e-16!33;CL:0000404!1.57e-16!33;CL:0000117!2.74e-15!23;CL:0000337!2.74e-15!23;CL:0000221!3.76e-11!44;CL:0000133!3.76e-11!44;CL:0000393!5.64e-11!39;CL:0000211!5.64e-11!39;CL:0002319!6.04e-11!43;CL:0000055!6.16e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.08e-18,33;CL:0000047,1.08e-18,33;CL:0000031,1.08e-18,33;CL:0000404,1.08e-18,33;CL:0000117,2.85e-17,23;CL:0000337,2.85e-17,23;CL:0000393,1.87e-13,39;CL:0000211,1.87e-13,39;CL:0000221,9.16e-13,44;CL:0000133,9.16e-13,44;CL:0002319,1.58e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.20e-26!73;UBERON:0005743!1.20e-26!73;UBERON:0000073!1.84e-26!75;UBERON:0001016!1.84e-26!75;UBERON:0002346!3.71e-25!71;UBERON:0003075!3.71e-25!71;UBERON:0007284!3.71e-25!71;UBERON:0004121!5.45e-24!102;UBERON:0000924!5.45e-24!102;UBERON:0006601!5.45e-24!102;UBERON:0000033!1.29e-22!63;UBERON:0003056!4.84e-22!49;UBERON:0001049!1.27e-21!52;UBERON:0005068!1.27e-21!52;UBERON:0006241!1.27e-21!52;UBERON:0007135!1.27e-21!52;UBERON:0000955!5.09e-20!50;UBERON:0006238!5.09e-20!50;UBERON:0002616!1.55e-19!49;UBERON:0002020!1.51e-18!34;UBERON:0003080!3.64e-18!40;UBERON:0002780!1.56e-17!39;UBERON:0001890!1.56e-17!39;UBERON:0006240!1.56e-17!39;UBERON:0002791!2.92e-15!29;UBERON:0003528!2.92e-15!29;UBERON:0001893!2.92e-15!29;UBERON:0000153!6.28e-13!94;UBERON:0007811!6.98e-13!86;UBERON:0000956!1.04e-10!21;UBERON:0001869!1.04e-10!21;UBERON:0000203!1.04e-10!21;UBERON:0002619!4.82e-08!17;UBERON:0000468!6.36e-08!333;UBERON:0002021!8.46e-08!10;UBERON:0000411!8.46e-08!10;UBERON:0001950!8.46e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.20e-31,64;UBERON:0003075,4.20e-31,64;UBERON:0007284,4.20e-31,64;UBERON:0001017,1.38e-30,73;UBERON:0001016,2.28e-30,75;UBERON:0004121,2.37e-28,95;UBERON:0000924,2.37e-28,95;UBERON:0006601,2.37e-28,95;UBERON:0000073,5.66e-27,54;UBERON:0010371,8.83e-26,73;UBERON:0003056,1.70e-25,49;UBERON:0001049,1.80e-25,52;UBERON:0005068,1.80e-25,52;UBERON:0006241,1.80e-25,52;UBERON:0007135,1.80e-25,52;UBERON:0000955,1.19e-21,47;UBERON:0006238,1.19e-21,47;UBERON:0002020,1.58e-21,34;UBERON:0002616,4.20e-21,46;UBERON:0003080,4.79e-21,40;UBERON:0002780,2.55e-20,39;UBERON:0001890,2.55e-20,39;UBERON:0006240,2.55e-20,39;UBERON:0010314,9.45e-19,92;UBERON:0003528,9.56e-18,29;UBERON:0002791,9.56e-18,29;UBERON:0001893,9.56e-18,29;UBERON:0000956,1.63e-12,21;UBERON:0001869,1.63e-12,21;UBERON:0000203,1.63e-12,21;UBERON:0002619,1.96e-09,17;UBERON:0002021,1.06e-08,10;UBERON:0000411,1.06e-08,10;UBERON:0001950,1.06e-08,10
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,28.7289374420629,40.7323054039465,26.6209189472595,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,39.7131215141469,37.3966449178783,37.437843120546,17.9960120174396,18.7738259808871,16.046294697159,13.0349840584801,13.7882817991503,12.1127469099328,16.2162919368188,15.8214729253931,27.6961204233407,37.3269585897831,32.2966289745191,11.725685958058,12.9435400307286,13.2934475565825,22.0971439105251,30.3251680102089,35.0430958151565,1.13589289999776,1.058001841495,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,5.0703631119605,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,0.346970653532272,1.21786191324856,0.691846491768175,1.05505848386836,0.705532242814229,0.628332956648377,0,0,0,2.26473589926373,0.662524555381181,0,0,5.85561594023094,8.16842156572475,0,0,0,0,20.8208988772704,15.5550204958333,12.942398267625,21.5542157038423,20.7129520437568,14.1295870300501,16.8730913590468,0.712875546952214,0.497627882440372,0,2.31486041475121,11.7108398666433,14.0240283704418,12.0641626969584,11.0014517020072,12.7908618404496,11.2740073850668,10.2134879770104,7.50239775143145,0.431135985865684,1.51284864134255,2.99116911078713,1.7535658594206,4.72680323683516,1.0447564995665,1.85203922767149,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,2.55793501271625,2.00547246753592,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0,0,0,0,0,19.3466752678997,17.2879748797198,0,0,6.39864751605702,3.0190767341857,3.73715637834071,1.81515172161008,1.11189021922435,1.71203063501303,0.949058123089023,1.64698954724011,1.50801125280162,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.796565093017469,0.569003702859245,1.14248512609729,2.25415471346161,1.4255592949172,2.13347735884388,1.33258057791605,1.45444035385792,0,0.31399745568275,0,0,1.16791574001266,1.17935397067922,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,1.14075483509418,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,13.9679013289379,14.7686725106176,0,0,4.10160685241134,4.68526493155966,7.97066571611356,2.38968797952552,3.11918143715352,4.81230102341015,4.04810701674894,4.67609372658099,8.69633111482352,11.2462460747632,0.283880170416537,1.42452482933804,3.25773918707152,0,0,0.971122544619926,0,0,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,3.06395645178409,7.56256594931503,1.03486947026204,2.35770738534752,10.2857335512519,5.52943334566419,7.40470592709544,3.04464949114599,0,0,0,0,0.807322133479528,0.361877549568935,0.238744688006273,0,0.874442509889552,9.45669040253599,0,1.03193433981611,0,0,0,0,0,0,0,2.86401185404534,5.3777118908793,4.26970880966382,3.88819226958485,3.3454127362315,2.18362563746178,2.29269388854195,4.05001933054146,1.83229159388821,0.388844919875379,0,0,0.747582730219894,0.66183396182839,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.13020438484395,2.83120229949419,0.966336483304024,0.576060012515731,0,2.22997736819181,0.513554785824136,0.909445760844565,0.358053391334963,0.39736270956253,0.120195449519969,0.886137163047463,0.100966449948148,0.15241361331,0.403304740547362,0.487289403698762,0.384847366561318,0.467507608726276,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,37.8383734553435,24.3972375348804,22.3429250241365,26.2935368985842,23.9778881919725,15.107877947794,24.300810008345,28.8205570063501,25.3759749031155,31.583379016861,1.86817225651518,6.78342284781753,7.34154504742777,8.99494853152688,5.65955539095552,3.8607136774503,8.88986911206461,5.97501665992793,6.09746498224449,6.82282471762253,7.09742039692671,8.11093267960128,6.9294715527713,9.15559679389631,10.3383844120104,6.66811167796303,8.34367146802959,9.64546102318525,9.06588981767275,8.68473628792944,6.51451579532289,7.27650805253284,8.34526664815623,6.39524233182245,9.12860990028707,9.22299226019274,8.04883080640199,6.05060336307039,11.9507620184358,6.17256498823512,7.11810108745045,7.2893316957917,8.18462086339379,7.90177890048427,5.01557188550968,11.2414760072076,5.84829021113521,6.23126056740065,2.29545998482612,1.10295709559758,0.463735671240843
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,28.7289374420629,40.7323054039465,26.6209189472595,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,39.7131215141469,37.3966449178783,37.437843120546,17.9960120174396,18.7738259808871,16.046294697159,13.0349840584801,13.7882817991503,12.1127469099328,16.2162919368188,15.8214729253931,27.6961204233407,37.3269585897831,32.2966289745191,11.725685958058,12.9435400307286,13.2934475565825,22.0971439105251,30.3251680102089,35.0430958151565,1.13589289999776,1.058001841495,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,5.0703631119605,0,0,0,0,0,0,0.68510327831436,0,1.7813056687779,0.346970653532272,1.21786191324856,0.691846491768175,1.05505848386836,0.705532242814229,0.628332956648377,0,0,0,2.26473589926373,0.662524555381181,0,0,5.85561594023094,8.16842156572475,0,0,0,0,20.8208988772704,15.5550204958333,12.942398267625,21.5542157038423,20.7129520437568,14.1295870300501,16.8730913590468,0.712875546952214,0.497627882440372,0,2.31486041475121,11.7108398666433,14.0240283704418,12.0641626969584,11.0014517020072,12.7908618404496,11.2740073850668,10.2134879770104,7.50239775143145,0.431135985865684,1.51284864134255,2.99116911078713,1.7535658594206,4.72680323683516,1.0447564995665,1.85203922767149,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.540186184383045,1.18372367792605,2.55793501271625,2.00547246753592,0.930135779001631,0.804820204198858,0.700592054203017,1.15191894939436,0,0,0,0,0,19.3466752678997,17.2879748797198,0,0,6.39864751605702,3.0190767341857,3.73715637834071,1.81515172161008,1.11189021922435,1.71203063501303,0.949058123089023,1.64698954724011,1.50801125280162,1.1937388322469,0.974820435595601,0.898819408654221,0.216138049874694,0.796565093017469,0.569003702859245,1.14248512609729,2.25415471346161,1.4255592949172,2.13347735884388,1.33258057791605,1.45444035385792,0,0.31399745568275,0,0,1.16791574001266,1.17935397067922,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,1.51593129416388,1.14075483509418,1.18821560042632,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.637819074629948,0,0.172684981865896,0.144649058581512,0,0,0,0,13.9679013289379,14.7686725106176,0,0,4.10160685241134,4.68526493155966,7.97066571611356,2.38968797952552,3.11918143715352,4.81230102341015,4.04810701674894,4.67609372658099,8.69633111482352,11.2462460747632,0.283880170416537,1.42452482933804,3.25773918707152,0,0,0.971122544619926,0,0,0.295301892880773,1.22974059177571,0,0.363533729477506,0.356497378384721,0.632073515871632,0,0,3.06395645178409,7.56256594931503,1.03486947026204,2.35770738534752,10.2857335512519,5.52943334566419,7.40470592709544,3.04464949114599,0,0,0,0,0.807322133479528,0.361877549568935,0.238744688006273,0,0.874442509889552,9.45669040253599,0,1.03193433981611,0,0,0,0,0,0,0,2.86401185404534,5.3777118908793,4.26970880966382,3.88819226958485,3.3454127362315,2.18362563746178,2.29269388854195,4.05001933054146,1.83229159388821,0.388844919875379,0,0,0.747582730219894,0.66183396182839,1.16670713006429,0.774958940866387,1.01373675294467,0.58678619322877,0.13020438484395,2.83120229949419,0.966336483304024,0.576060012515731,0,2.22997736819181,0.513554785824136,0.909445760844565,0.358053391334963,0.39736270956253,0.120195449519969,0.886137163047463,0.100966449948148,0.15241361331,0.403304740547362,0.487289403698762,0.384847366561318,0.467507608726276,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,37.8383734553435,24.3972375348804,22.3429250241365,26.2935368985842,23.9778881919725,15.107877947794,24.300810008345,28.8205570063501,25.3759749031155,31.583379016861,1.86817225651518,6.78342284781753,7.34154504742777,8.99494853152688,5.65955539095552,3.8607136774503,8.88986911206461,5.97501665992793,6.09746498224449,6.82282471762253,7.09742039692671,8.11093267960128,6.9294715527713,9.15559679389631,10.3383844120104,6.66811167796303,8.34367146802959,9.64546102318525,9.06588981767275,8.68473628792944,6.51451579532289,7.27650805253284,8.34526664815623,6.39524233182245,9.12860990028707,9.22299226019274,8.04883080640199,6.05060336307039,11.9507620184358,6.17256498823512,7.11810108745045,7.2893316957917,8.18462086339379,7.90177890048427,5.01557188550968,11.2414760072076,5.84829021113521,6.23126056740065,2.29545998482612,1.10295709559758,0.463735671240843
|short_description=p1@Khdrbs2
|short_description=p1@Khdrbs2
}}
}}

Latest revision as of 01:37, 27 September 2015

Short description:p1@Khdrbs2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Khdrbs2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -13bp_to_ENSMUST00000027226, NM_133235, uc007ann.1, uc007ano.1, uc007anp.1_5end
EntrezGene:Khdrbs2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Khdrbs2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C328.73
Mouse Granule cells, donor2.CNhs12357.11731-123E340.73
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D539.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D937.44
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.05
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.30
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F630.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E135.04
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F112.94
cortex, adult.CNhs10473.12-14D521.55
cortex, neonate N30.CNhs11107.1392-42F220.71
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B216.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C611.71
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C612.79
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G810.21
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G117.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B910.29
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.08e-1833
neuronal stem cell1.08e-1833
neuroblast1.08e-1833
electrically signaling cell1.08e-1833
CNS neuron (sensu Vertebrata)2.85e-1723
neuroblast (sensu Vertebrata)2.85e-1723
electrically responsive cell1.87e-1339
electrically active cell1.87e-1339
ectodermal cell9.16e-1344
neurectodermal cell9.16e-1344
neural cell1.58e-1243

Uber anatomy
Ontology termp-valuen
neurectoderm4.20e-3164
neural plate4.20e-3164
presumptive neural plate4.20e-3164
central nervous system1.38e-3073
nervous system2.28e-3075
ectoderm-derived structure2.37e-2895
ectoderm2.37e-2895
presumptive ectoderm2.37e-2895
regional part of nervous system5.66e-2754
ecto-epithelium8.83e-2673
pre-chordal neural plate1.70e-2549
neural tube1.80e-2552
neural rod1.80e-2552
future spinal cord1.80e-2552
neural keel1.80e-2552
brain1.19e-2147
future brain1.19e-2147
gray matter1.58e-2134
regional part of brain4.20e-2146
anterior neural tube4.79e-2140
regional part of forebrain2.55e-2039
forebrain2.55e-2039
future forebrain2.55e-2039
structure with developmental contribution from neural crest9.45e-1992
brain grey matter9.56e-1829
regional part of telencephalon9.56e-1829
telencephalon9.56e-1829
cerebral cortex1.63e-1221
cerebral hemisphere1.63e-1221
pallium1.63e-1221
regional part of cerebral cortex1.96e-0917
occipital lobe1.06e-0810
visual cortex1.06e-0810
neocortex1.06e-0810
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