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FFCP PHASE1:Mm9::chr11:110113007..110113018,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76184
|EntrezGene=76184
|HGNC=
|HGNC=
|MCL_coexpression_id=120
|TSSclassifier=NA
|UniProt=Q8K441
|UniProt=Q8K441
|association_with_transcript=71bp_to_ENSMUST00000044003,ENSMUST00000150988,NM_001166556,NM_001166557,NM_147218,uc007mdj.2,uc007mdk.2,uc007mdl.2_5end
|association_with_transcript=71bp_to_ENSMUST00000044003,ENSMUST00000150988,NM_001166556,NM_001166557,NM_147218,uc007mdj.2,uc007mdk.2,uc007mdl.2_5end
|cluster_id=chr11:110113007..110113018,-
|description=CAGE_peak_3_at_Abca6_5end
|description=CAGE_peak_3_at_Abca6_5end
|id=chr11:110113007..110113018,-
|id=chr11:110113007..110113018,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000466!2.42e-12!79;UBERON:0003914!7.37e-12!47;UBERON:0009854!9.14e-12!23;UBERON:0009856!9.14e-12!23;UBERON:0009569!1.75e-11!66;UBERON:0005177!1.78e-11!85;UBERON:0002107!2.26e-11!22;UBERON:0007499!2.26e-11!22;UBERON:0006925!2.26e-11!22;UBERON:0009497!2.26e-11!22;UBERON:0000015!2.26e-11!22;UBERON:0002423!2.26e-11!22;UBERON:0006235!2.26e-11!22;UBERON:0008835!2.26e-11!22;UBERON:0003894!2.26e-11!22;UBERON:0004161!2.26e-11!22;UBERON:0008836!2.26e-11!22;UBERON:0002365!9.31e-11!25;UBERON:0002330!9.31e-11!25;UBERON:0005256!1.08e-09!47;UBERON:0002100!1.31e-09!98;UBERON:0005172!1.34e-09!49;UBERON:0005173!1.34e-09!49;UBERON:0002417!1.34e-09!49;UBERON:0000916!1.34e-09!49;UBERON:0001048!3.26e-08!147;UBERON:0000926!1.95e-07!193;UBERON:0004120!1.95e-07!193;UBERON:0006603!1.95e-07!193;UBERON:0000468!4.55e-07!333
|ontology_enrichment_uberon=UBERON:0000466!2.42e-12!79;UBERON:0003914!7.37e-12!47;UBERON:0009854!9.14e-12!23;UBERON:0009856!9.14e-12!23;UBERON:0009569!1.75e-11!66;UBERON:0005177!1.78e-11!85;UBERON:0002107!2.26e-11!22;UBERON:0007499!2.26e-11!22;UBERON:0006925!2.26e-11!22;UBERON:0009497!2.26e-11!22;UBERON:0000015!2.26e-11!22;UBERON:0002423!2.26e-11!22;UBERON:0006235!2.26e-11!22;UBERON:0008835!2.26e-11!22;UBERON:0003894!2.26e-11!22;UBERON:0004161!2.26e-11!22;UBERON:0008836!2.26e-11!22;UBERON:0002365!9.31e-11!25;UBERON:0002330!9.31e-11!25;UBERON:0005256!1.08e-09!47;UBERON:0002100!1.31e-09!98;UBERON:0005172!1.34e-09!49;UBERON:0005173!1.34e-09!49;UBERON:0002417!1.34e-09!49;UBERON:0000916!1.34e-09!49;UBERON:0001048!3.26e-08!147;UBERON:0000926!1.95e-07!193;UBERON:0004120!1.95e-07!193;UBERON:0006603!1.95e-07!193;UBERON:0000468!4.55e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.37e-15,47;UBERON:0009854,7.74e-14,23;UBERON:0009856,7.74e-14,23;UBERON:0002107,2.93e-13,22;UBERON:0007499,2.93e-13,22;UBERON:0006925,2.93e-13,22;UBERON:0009497,2.93e-13,22;UBERON:0000015,2.93e-13,22;UBERON:0002423,2.93e-13,22;UBERON:0006235,2.93e-13,22;UBERON:0008835,2.93e-13,22;UBERON:0003894,2.93e-13,22;UBERON:0004161,2.93e-13,22;UBERON:0008836,2.93e-13,22;UBERON:0009569,1.25e-12,66;UBERON:0005177,1.54e-12,79;UBERON:0002365,8.06e-11,25;UBERON:0002330,8.06e-11,25;UBERON:0005256,1.05e-10,45;UBERON:0002100,5.13e-10,90;UBERON:0005172,1.65e-09,49;UBERON:0005173,1.65e-09,49;UBERON:0002417,1.65e-09,49;UBERON:0000916,1.65e-09,49;UBERON:0003104,2.98e-07,61;UBERON:0009142,2.98e-07,61
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.274228867211478,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,2.86533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0,0,0.589257170947335,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,5.16254326188832,5.439770669662,9.71465744948071,26.6408331153544,30.0178014355215,5.75822122540183,0,0,0,0.281686839553361,0,0,0,0,0,0,9.47726201668198,1.29468941823586,1.7813056687779,0.346970653532272,1.82679286987285,1.15307748628029,1.65794904607885,5.29149182110672,1.88499886994513,0,5.06097749219691,0,0.808834249737046,0.883366073841574,0.484875253135222,1.86391761218122,0,0.628340120440365,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,8.04530974417499,3.11017426525233,0.758168275301024,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0.90422890701429,0.680364991513279,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.36012412292203,0.473489471170421,1.18058539048442,2.1597395804233,0.465067889500816,1.87791380979733,3.97002164048376,2.63295759861569,2.95501435342371,2.83740833410495,3.65499968563331,1.97595103761946,6.71032093801859,0.420579897128254,1.02904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.754005626400808,1.1937388322469,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,1.33258057791605,0.758838445491087,1.03327103585722,0.627994911365499,0.863780147452604,19.2694207606647,0.500535317148282,0.786235980452812,0.449724224769707,0.811440485554012,2.894125917029,2.5462585178142,8.34318798607351,32.9134510353322,9.06052663520669,14.3768206527355,16.0020607497456,5.61667811606209,17.6805214562978,8.96987067609561,36.1832641022525,2.21703828199926,0.189491411770485,1.30371981153621,1.35796068620151,0.938760993154008,1.00503754465089,1.6663054862021,1.56106918286239,1.10344600874334,2.21464689648775,1.43509291791738,2.62181303545181,1.38147985492716,1.44649058581512,0,0,0.491764273019036,0.827810238914197,0.963303539926752,0.820481806145422,0,4.79694761688309,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0.891194696329576,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,4.40014264145633,1.06839362200353,6.51547837414304,4.61916344323099,2.65490276679926,0.242780636154981,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,1.80899805217755,1.09060118843252,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0.882113592219848,3.46261131177108,5.8127193610526,0.72375509913787,1.07435109602823,0.492422699235184,0,1.48340241608408,0,0.82554747185289,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0.836353184057875,1.09181281873089,1.07891477107857,2.14898984885873,0.523511883968059,0.518459893167171,0.621339313086926,0.56369293868419,0.299033092087958,0,0.388902376688095,0.387479470433193,0.844780627453891,3.0512882047896,1.69265700297135,0.943734099831398,0.724752362478018,1.15212002503146,0.316011120628178,0.202725215290164,0.821687657318618,0.25984164595559,0.358053391334963,0.79472541912506,0.240390899039938,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.38983152295901,0,0.116876902181569,1.36038230169127,0,0,0,0.386379188064381,1.31377732815827,4.57879060668163,0.857473516316263,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,1.11123363900808,0.618105171716683,1.60459604795908,1.01078884705519,0.760437899670719,1.88626341386076,1.591905626988,1.21647789569252,1.55075766180156,0.952587382566147,1.15884325944855,1.15745532278223,1.23625770240992,0.883193520806384,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.59985946706062,1.01537529470012,1.64635175585495,1.31534855718921,1.49384525230448,1.68342681497322,0.949080144993393,1.18205378850676,2.45538625901814,1.70430525304563,2.12197272079256,0,2.57324769289949,3.00819475667618,4.20834330551455,1.98532277207564,0.695603506861264
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.274228867211478,0.42438965179803,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,2.86533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0,0,0.589257170947335,0.284743361598206,0,0.075726193333184,0.302286240427142,1.15945795480671,5.16254326188832,5.439770669662,9.71465744948071,26.6408331153544,30.0178014355215,5.75822122540183,0,0,0,0.281686839553361,0,0,0,0,0,0,9.47726201668198,1.29468941823586,1.7813056687779,0.346970653532272,1.82679286987285,1.15307748628029,1.65794904607885,5.29149182110672,1.88499886994513,0,5.06097749219691,0,0.808834249737046,0.883366073841574,0.484875253135222,1.86391761218122,0,0.628340120440365,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,8.04530974417499,3.11017426525233,0.758168275301024,1.26265113531884,0.130120442962704,0.229902104433473,0.540186389416048,0.90422890701429,0.680364991513279,0.384341160854549,0.281105173679186,1.29351685369508,0,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0.36012412292203,0.473489471170421,1.18058539048442,2.1597395804233,0.465067889500816,1.87791380979733,3.97002164048376,2.63295759861569,2.95501435342371,2.83740833410495,3.65499968563331,1.97595103761946,6.71032093801859,0.420579897128254,1.02904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.754005626400808,1.1937388322469,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0.387904974335251,1.33258057791605,0.758838445491087,1.03327103585722,0.627994911365499,0.863780147452604,19.2694207606647,0.500535317148282,0.786235980452812,0.449724224769707,0.811440485554012,2.894125917029,2.5462585178142,8.34318798607351,32.9134510353322,9.06052663520669,14.3768206527355,16.0020607497456,5.61667811606209,17.6805214562978,8.96987067609561,36.1832641022525,2.21703828199926,0.189491411770485,1.30371981153621,1.35796068620151,0.938760993154008,1.00503754465089,1.6663054862021,1.56106918286239,1.10344600874334,2.21464689648775,1.43509291791738,2.62181303545181,1.38147985492716,1.44649058581512,0,0,0.491764273019036,0.827810238914197,0.963303539926752,0.820481806145422,0,4.79694761688309,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0.891194696329576,0.849229592366497,0.809621403349789,0.292255857911312,0.790575555893047,0.642642632843614,4.40014264145633,1.06839362200353,6.51547837414304,4.61916344323099,2.65490276679926,0.242780636154981,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,1.80899805217755,1.09060118843252,2.49548164869305,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,1.2178597964584,0.704015124191131,0.21183207086382,0.882113592219848,3.46261131177108,5.8127193610526,0.72375509913787,1.07435109602823,0.492422699235184,0,1.48340241608408,0,0.82554747185289,0.370389054739423,0.188368457004691,0.27338845544205,0,0,0,0,0,0.316335993581135,0.609958401380546,0.540026704109006,0.836353184057875,1.09181281873089,1.07891477107857,2.14898984885873,0.523511883968059,0.518459893167171,0.621339313086926,0.56369293868419,0.299033092087958,0,0.388902376688095,0.387479470433193,0.844780627453891,3.0512882047896,1.69265700297135,0.943734099831398,0.724752362478018,1.15212002503146,0.316011120628178,0.202725215290164,0.821687657318618,0.25984164595559,0.358053391334963,0.79472541912506,0.240390899039938,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.38983152295901,0,0.116876902181569,1.36038230169127,0,0,0,0.386379188064381,1.31377732815827,4.57879060668163,0.857473516316263,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,0.900642406448441,0,0.51776031175182,0,0,0.341467211508268,0.729320151204882,0.419226325255965,0.551530525350042,1.11123363900808,0.618105171716683,1.60459604795908,1.01078884705519,0.760437899670719,1.88626341386076,1.591905626988,1.21647789569252,1.55075766180156,0.952587382566147,1.15884325944855,1.15745532278223,1.23625770240992,0.883193520806384,1.02860775715625,0.70990322463735,0.953744759789284,1.30811774969096,1.59985946706062,1.01537529470012,1.64635175585495,1.31534855718921,1.49384525230448,1.68342681497322,0.949080144993393,1.18205378850676,2.45538625901814,1.70430525304563,2.12197272079256,0,2.57324769289949,3.00819475667618,4.20834330551455,1.98532277207564,0.695603506861264
|short_description=p3@Abca6
|short_description=p3@Abca6
}}
}}

Latest revision as of 21:57, 26 September 2015

Short description:p3@Abca6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Abca6_5end
Coexpression cluster:MCL_coexpression_mm9:120
Association with transcript: 71bp_to_ENSMUST00000044003, ENSMUST00000150988, NM_001166556, NM_001166557, NM_147218, uc007mdj.2, uc007mdk.2, uc007mdl.2_5end
EntrezGene:Abca6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Abca6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F426.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.02
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.48
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C15.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F432.91
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A317.68
liver, neonate N25.CNhs11198.1368-26H18.97
liver, neonate N30.CNhs11106.1382-42D136.18
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube3.37e-1547
digestive tract diverticulum7.74e-1423
sac7.74e-1423
liver2.93e-1322
epithelial sac2.93e-1322
digestive gland2.93e-1322
epithelium of foregut-midgut junction2.93e-1322
anatomical boundary2.93e-1322
hepatobiliary system2.93e-1322
foregut-midgut junction2.93e-1322
hepatic diverticulum2.93e-1322
liver primordium2.93e-1322
septum transversum2.93e-1322
liver bud2.93e-1322
subdivision of trunk1.25e-1266
trunk region element1.54e-1279
exocrine gland8.06e-1125
exocrine system8.06e-1125
trunk mesenchyme1.05e-1045
trunk5.13e-1090
abdomen element1.65e-0949
abdominal segment element1.65e-0949
abdominal segment of trunk1.65e-0949
abdomen1.65e-0949
mesenchyme2.98e-0761
entire embryonic mesenchyme2.98e-0761
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