FFCP PHASE1:Mm9::chr3:88307520..88307536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16905 | |EntrezGene=16905 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=34 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_ENSMUST00000135494_5end | |association_with_transcript=-261bp_to_ENSMUST00000135494_5end | ||
|cluster_id=chr3:88307520..88307536,- | |||
|description=CAGE_peak_5_at_Lmna_5end | |description=CAGE_peak_5_at_Lmna_5end | ||
|id=chr3:88307520..88307536,- | |id=chr3:88307520..88307536,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,3.69e-15,2;CL:0000129,3.69e-15,2;CL:0000049,1.20e-09,19;CL:0002194,4.78e-08,4;CL:0000766,4.78e-08,4;CL:0000234,4.78e-08,4;CL:0000576,4.78e-08,4;CL:0000235,4.78e-08,4;CL:0000864,4.78e-08,4;CL:0002009,4.78e-08,4;CL:0000040,4.78e-08,4;CL:0000559,4.78e-08,4;CL:0000333,4.70e-07,10;CL:0000095,4.70e-07,10;CL:0000243,4.70e-07,10;CL:0000123,4.70e-07,10;CL:0000125,4.70e-07,10;CL:0000030,4.70e-07,10;CL:0000339,4.70e-07,10;CL:0000034,9.59e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.03e-07!11 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,2.37191172448392,0,0.449949858640699,0,0.7104801149461,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,1.36028808192214,0.579728977403356,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,4.67278985573089,0.599902730993408,2.28726408731516,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0.175951124163949,0,0.556094498451196,1.0447564995665,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,1.18586333383957,0,0.141940085208269,0.534196811001766,0.651547837414304,0.164970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0.645857706783622,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,2.88963330989554,6.01791244991729,4.56059913554598,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0.644613162144895,0.57386499620653,0,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,2.37191172448392,0,0.449949858640699,0,0.7104801149461,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,1.36028808192214,0.579728977403356,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.346970653532272,0,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,0,4.67278985573089,0.599902730993408,2.28726408731516,0,0,0,0,0,0,0,0.203678727700633,0.248813941220186,0,0,0,0,0,0,0.204109497453984,0.12811372028485,0,0,0,0,0.175951124163949,0,0.556094498451196,1.0447564995665,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0,0,0,0.215423397732799,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,0.292255857911312,1.18586333383957,0,0.141940085208269,0.534196811001766,0.651547837414304,0.164970122972535,0,0,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0,0,0.32977250588296,0.645857706783622,0,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,2.88963330989554,6.01791244991729,4.56059913554598,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.565879024158229,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0,0.644613162144895,0.57386499620653,0,0.231867835620421 | ||
|short_description=p5@Lmna | |short_description=p5@Lmna | ||
}} | }} |
Latest revision as of 19:52, 25 September 2015
Short description: | p5@Lmna |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lmna_5end |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | -261bp_to_ENSMUST00000135494_5end |
EntrezGene: | Lmna |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 3.69e-15 | 2 |
microglial cell | 3.69e-15 | 2 |
common myeloid progenitor | 1.20e-09 | 19 |
monopoietic cell | 4.78e-08 | 4 |
myeloid leukocyte | 4.78e-08 | 4 |
phagocyte | 4.78e-08 | 4 |
monocyte | 4.78e-08 | 4 |
macrophage | 4.78e-08 | 4 |
tissue-resident macrophage | 4.78e-08 | 4 |
macrophage dendritic cell progenitor | 4.78e-08 | 4 |
monoblast | 4.78e-08 | 4 |
promonocyte | 4.78e-08 | 4 |
migratory neural crest cell | 4.70e-07 | 10 |
neuron associated cell | 4.70e-07 | 10 |
glial cell (sensu Vertebrata) | 4.70e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.70e-07 | 10 |
glial cell | 4.70e-07 | 10 |
glioblast | 4.70e-07 | 10 |
glioblast (sensu Vertebrata) | 4.70e-07 | 10 |
stem cell | 9.59e-07 | 97 |