Personal tools

FFCP PHASE1:Mm9::chr1:191746250..191746272,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=226830
|EntrezGene=226830
|HGNC=
|HGNC=
|MCL_coexpression_id=19
|TSSclassifier=NA
|UniProt=Q8R5A0
|UniProt=Q8R5A0
|association_with_transcript=-8bp_to_ENSMUST00000027897_5end
|association_with_transcript=-8bp_to_ENSMUST00000027897_5end
|cluster_id=chr1:191746250..191746272,-
|description=CAGE_peak_2_at_Smyd2_5end
|description=CAGE_peak_2_at_Smyd2_5end
|id=chr1:191746250..191746272,-
|id=chr1:191746250..191746272,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.89e-11!47;UBERON:0004535!1.99e-10!23;UBERON:0001009!1.99e-10!23;UBERON:0007100!1.23e-09!18;UBERON:0000948!1.23e-09!18;UBERON:0005498!1.23e-09!18;UBERON:0004140!1.23e-09!18;UBERON:0009881!1.23e-09!18;UBERON:0004141!1.23e-09!18;UBERON:0003084!1.23e-09!18;UBERON:0007005!1.23e-09!18;UBERON:0004139!1.23e-09!18;UBERON:0004291!1.23e-09!18
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.73e-11,47;UBERON:0004535,1.91e-10,23;UBERON:0001009,1.91e-10,23;UBERON:0007100,1.18e-09,18;UBERON:0000948,1.18e-09,18;UBERON:0005498,1.18e-09,18;UBERON:0004140,1.18e-09,18;UBERON:0009881,1.18e-09,18;UBERON:0004141,1.18e-09,18;UBERON:0003084,1.18e-09,18;UBERON:0007005,1.18e-09,18;UBERON:0004139,1.18e-09,18;UBERON:0004291,1.18e-09,18
|phase1_expression=3.68342348341026,1.04692622291808,0.909998478779072,0.30246421130683,0,4.70061961353291,2.80335168714631,2.84071311571468,0.985521055061667,0.468129052643987,4.79410311031414,4.30769658574817,1.02720437958723,0.699363219351979,4.33042690360362,2.63217847606774,1.39912375625629,0.315462165358238,0.685572168028694,1.69755860719212,2.12608225377674,6.15603897445489,5.48519557191764,2.3998863419011,2.06468352960453,1.14846392823004,0.86152399231815,2.15471232685889,2.66032787238923,4.03248207615889,4.21287970245079,8.89042942843484,5.53558308826113,0,8.66554859253824,9.30914014007557,6.53341940039581,0.418531630736908,0,0,0,0,0,6.04304726282771,6.48812359804893,6.05704282133549,2.34717403304412,1.96222640742402,3.73466510648602,2.52758868796568,4.33957907038624,0,1.00669563634642,0.725362142011344,2.01656279485478,6.94600477297057,2.86533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0,5.76035704517525,6.22506357277798,2.6996991518442,1.97773272513395,2.1314403448383,2.69640099466564,1.53687322128622,0.933206510776299,1.21505344498522,1.47227472945967,3.71346279724945,5.07997644188711,0.979926393719632,0.287536413054709,0.919218786610021,2.20231761998777,3.44755812830007,4.6081959976873,1.71452174049252,0.914876436024097,1.56274011167028,6.70039197603314,3.93933827022176,2.75036845998258,2.65165726926301,2.42031857358475,2.60959224155421,16.1296791799682,5.89458168832927,5.79728977403356,8.60423876981386,5.439770669662,7.55584468292944,6.49776417447669,7.6164570806547,10.9546647702766,8.18065548374677,7.27400812888033,6.36011234118612,2.95771181531029,2.56652954828636,5.09610479413291,7.11066703153331,1.73192832808971,3.29367825117628,2.02209778005913,3.65388415100992,1.55362730188303,2.07818994690755,4.51061849591953,2.13125834818499,0.922461989024234,2.26083960828934,2.11659672844269,4.39833069653864,1.48316980640624,2.31358971071859,9.73071607144862,18.6031877439521,9.27534377533653,7.75800405016355,5.59175283654366,0.878342391034642,1.67557365450764,3.0654846625031,5.39168060276641,7.19883277192089,3.43089613097275,3.74476598512057,0,0.502617408451458,0.521472960576829,0.511430914660661,2.70124457927428,2.10913641988085,3.7680564624617,4.85187185379363,0.505445516867349,1.89397670297827,2.34216797332867,3.21862946206862,4.32149111532838,1.65775299619287,3.60593445502038,2.0498195245576,2.34254311399322,0.776110112217047,2.80238390812695,1.51284864134255,2.46331573829528,2.84954452155847,1.94633074457919,5.57203466435466,3.49829631893504,2.38841120182192,1.40442637462647,5.1469581422943,3.40996199274711,15.5344329401626,12.195355119017,16.3856475929524,20.1233025247429,29.711398993858,26.3796763037417,29.9968788728026,30.8514411609562,34.2122453135807,32.9119699826961,25.938459324497,22.456060244202,22.9533980257772,14.0512073786272,13.2864354572768,0.420579897128254,0.720332286654991,0.330418782983798,3.70230793328962,2.77274725695804,3.48355007790658,4.63922860759536,3.42861991859682,2.00140239460383,1.14135375667535,3.79623249235609,3.12928013975621,3.51869292320377,3.58121649674071,3.70431765526328,1.79763881730844,1.94524244887225,1.59313018603494,1.51734320762465,2.62771579002376,5.63538678365402,4.48032921259691,2.13347735884388,3.92760591385784,4.17361145020098,3.83786384746966,2.82597710114475,3.45512058981041,7.11486305009157,2.8363667971736,2.55526693647164,3.82265591054251,3.44862206360455,5.06472035480075,2.80088436959562,2.30156909960649,2.91843408195064,3.84385978463314,7.18841032636773,6.69853705803306,4.05648975048929,5.05157755894223,5.38192240565737,1.92977408545347,4.0645701836653,3.97931964718018,4.23708938749267,3.90413697282933,3.52035372432753,2.84760637651087,2.14239276797412,3.12213836572478,2.04925687338048,3.32197034473162,2.71073106717728,2.13022309130459,1.89953480052485,1.59113964439663,0,1.08781136763742,0.983528546038072,3.03530420935206,4.65596710964597,5.15731421005694,7.70494243270374,43.4249994791522,1.89304931649754,4.29482618726302,3.01592756825919,4.77937595905104,3.56477878531831,3.39691836946599,3.23848561339915,2.33804686329049,2.76701444562566,5.78378369559253,2.83880170416537,4.98583690268315,4.0721739838394,2.63952196756057,1.32745138339963,1.45668381692989,4.23252979750651,3.39489143560617,6.79194353625777,4.91896236710284,3.35956781118687,4.72593848320757,5.70395805415554,2.84433082142234,4.21674434299995,2.06271086496374,1.02131881726136,3.06103859853227,2.19909762430683,1.50035924522115,1.41872186913819,1.42695054081656,2.63278432963394,2.74018454203139,6.57080782578389,3.38931313382112,2.20528398054962,5.93590510589328,5.16686165426898,4.94565984410878,4.53614907211919,6.72977688954751,2.62332752966866,6.30446026835733,0.341741761595705,2.47664241555867,1.66675074632741,0.753473828018764,1.0935538217682,2.28778173206523,5.26933132980952,5.73800954526998,3.04039942369732,1.90934123603023,2.37251995185852,4.26970880966382,3.24016022465404,2.29997125615916,3.05707589244649,3.10187996685088,1.98368293740806,2.87931536182433,2.46268449254406,0.621339313086926,2.25477175473676,2.54178128274764,2.64733584731356,2.72231663681667,2.45403664607689,3.21016638432478,2.46450201156083,5.4685841634459,4.71867049915699,1.20792060413003,2.59227005632079,0.632022241256357,4.45995473638361,6.26536838705446,4.93699127315621,5.01274747868948,3.17890167650024,3.00488623799922,4.13530676088816,2.92802704849628,4.03896075271499,1.81487133246313,1.75424185331554,2.40529604100824,1.40252282617883,3.62768613784338,3.55177525398503,8.61253023450967,2.85403847818933,2.89784391048286,5.2551093126331,2.93042598827624,3.64426244434412,1.00314420807073,0,0.460325236507177,1.71868654031819,0.171853182343688,0,0,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,2.28332164685189,1.99512436700516,3.75613932659095,4.132814190161,3.5634237646757,3.67687016900028,5.778414922842,4.73880631649457,4.1719497246936,5.05394423527595,2.5347929989024,3.77252682772152,2.80924522409647,4.35371036353111,4.7671439233159,6.19181798667996,5.79421629724277,5.78727661391115,5.35711671044299,4.41596760403192,5.14303878578123,3.72699192934609,4.05341522910446,4.94177816549917,4.23492211868988,3.89227196301712,4.93905526756486,2.10455769150274,3.93831930152999,3.36685362994643,5.81311588808453,4.92522411877817,5.32000356120596,5.57772628269478,3.08650577569826,3.74715866906919,3.74290573512653,6.44613162144895,14.1553365730944,9.26483960301965,7.41977073985349
|phase1_expression=3.68342348341026,1.04692622291808,0.909998478779072,0.30246421130683,0,4.70061961353291,2.80335168714631,2.84071311571468,0.985521055061667,0.468129052643987,4.79410311031414,4.30769658574817,1.02720437958723,0.699363219351979,4.33042690360362,2.63217847606774,1.39912375625629,0.315462165358238,0.685572168028694,1.69755860719212,2.12608225377674,6.15603897445489,5.48519557191764,2.3998863419011,2.06468352960453,1.14846392823004,0.86152399231815,2.15471232685889,2.66032787238923,4.03248207615889,4.21287970245079,8.89042942843484,5.53558308826113,0,8.66554859253824,9.30914014007557,6.53341940039581,0.418531630736908,0,0,0,0,0,6.04304726282771,6.48812359804893,6.05704282133549,2.34717403304412,1.96222640742402,3.73466510648602,2.52758868796568,4.33957907038624,0,1.00669563634642,0.725362142011344,2.01656279485478,6.94600477297057,2.86533439938757,1.03134418455488,1.41621522601718,0.528990979272033,0,5.76035704517525,6.22506357277798,2.6996991518442,1.97773272513395,2.1314403448383,2.69640099466564,1.53687322128622,0.933206510776299,1.21505344498522,1.47227472945967,3.71346279724945,5.07997644188711,0.979926393719632,0.287536413054709,0.919218786610021,2.20231761998777,3.44755812830007,4.6081959976873,1.71452174049252,0.914876436024097,1.56274011167028,6.70039197603314,3.93933827022176,2.75036845998258,2.65165726926301,2.42031857358475,2.60959224155421,16.1296791799682,5.89458168832927,5.79728977403356,8.60423876981386,5.439770669662,7.55584468292944,6.49776417447669,7.6164570806547,10.9546647702766,8.18065548374677,7.27400812888033,6.36011234118612,2.95771181531029,2.56652954828636,5.09610479413291,7.11066703153331,1.73192832808971,3.29367825117628,2.02209778005913,3.65388415100992,1.55362730188303,2.07818994690755,4.51061849591953,2.13125834818499,0.922461989024234,2.26083960828934,2.11659672844269,4.39833069653864,1.48316980640624,2.31358971071859,9.73071607144862,18.6031877439521,9.27534377533653,7.75800405016355,5.59175283654366,0.878342391034642,1.67557365450764,3.0654846625031,5.39168060276641,7.19883277192089,3.43089613097275,3.74476598512057,0,0.502617408451458,0.521472960576829,0.511430914660661,2.70124457927428,2.10913641988085,3.7680564624617,4.85187185379363,0.505445516867349,1.89397670297827,2.34216797332867,3.21862946206862,4.32149111532838,1.65775299619287,3.60593445502038,2.0498195245576,2.34254311399322,0.776110112217047,2.80238390812695,1.51284864134255,2.46331573829528,2.84954452155847,1.94633074457919,5.57203466435466,3.49829631893504,2.38841120182192,1.40442637462647,5.1469581422943,3.40996199274711,15.5344329401626,12.195355119017,16.3856475929524,20.1233025247429,29.711398993858,26.3796763037417,29.9968788728026,30.8514411609562,34.2122453135807,32.9119699826961,25.938459324497,22.456060244202,22.9533980257772,14.0512073786272,13.2864354572768,0.420579897128254,0.720332286654991,0.330418782983798,3.70230793328962,2.77274725695804,3.48355007790658,4.63922860759536,3.42861991859682,2.00140239460383,1.14135375667535,3.79623249235609,3.12928013975621,3.51869292320377,3.58121649674071,3.70431765526328,1.79763881730844,1.94524244887225,1.59313018603494,1.51734320762465,2.62771579002376,5.63538678365402,4.48032921259691,2.13347735884388,3.92760591385784,4.17361145020098,3.83786384746966,2.82597710114475,3.45512058981041,7.11486305009157,2.8363667971736,2.55526693647164,3.82265591054251,3.44862206360455,5.06472035480075,2.80088436959562,2.30156909960649,2.91843408195064,3.84385978463314,7.18841032636773,6.69853705803306,4.05648975048929,5.05157755894223,5.38192240565737,1.92977408545347,4.0645701836653,3.97931964718018,4.23708938749267,3.90413697282933,3.52035372432753,2.84760637651087,2.14239276797412,3.12213836572478,2.04925687338048,3.32197034473162,2.71073106717728,2.13022309130459,1.89953480052485,1.59113964439663,0,1.08781136763742,0.983528546038072,3.03530420935206,4.65596710964597,5.15731421005694,7.70494243270374,43.4249994791522,1.89304931649754,4.29482618726302,3.01592756825919,4.77937595905104,3.56477878531831,3.39691836946599,3.23848561339915,2.33804686329049,2.76701444562566,5.78378369559253,2.83880170416537,4.98583690268315,4.0721739838394,2.63952196756057,1.32745138339963,1.45668381692989,4.23252979750651,3.39489143560617,6.79194353625777,4.91896236710284,3.35956781118687,4.72593848320757,5.70395805415554,2.84433082142234,4.21674434299995,2.06271086496374,1.02131881726136,3.06103859853227,2.19909762430683,1.50035924522115,1.41872186913819,1.42695054081656,2.63278432963394,2.74018454203139,6.57080782578389,3.38931313382112,2.20528398054962,5.93590510589328,5.16686165426898,4.94565984410878,4.53614907211919,6.72977688954751,2.62332752966866,6.30446026835733,0.341741761595705,2.47664241555867,1.66675074632741,0.753473828018764,1.0935538217682,2.28778173206523,5.26933132980952,5.73800954526998,3.04039942369732,1.90934123603023,2.37251995185852,4.26970880966382,3.24016022465404,2.29997125615916,3.05707589244649,3.10187996685088,1.98368293740806,2.87931536182433,2.46268449254406,0.621339313086926,2.25477175473676,2.54178128274764,2.64733584731356,2.72231663681667,2.45403664607689,3.21016638432478,2.46450201156083,5.4685841634459,4.71867049915699,1.20792060413003,2.59227005632079,0.632022241256357,4.45995473638361,6.26536838705446,4.93699127315621,5.01274747868948,3.17890167650024,3.00488623799922,4.13530676088816,2.92802704849628,4.03896075271499,1.81487133246313,1.75424185331554,2.40529604100824,1.40252282617883,3.62768613784338,3.55177525398503,8.61253023450967,2.85403847818933,2.89784391048286,5.2551093126331,2.93042598827624,3.64426244434412,1.00314420807073,0,0.460325236507177,1.71868654031819,0.171853182343688,0,0,0.675022500231806,0.900642406448441,0.906284817968409,2.07104124700728,2.28332164685189,1.99512436700516,3.75613932659095,4.132814190161,3.5634237646757,3.67687016900028,5.778414922842,4.73880631649457,4.1719497246936,5.05394423527595,2.5347929989024,3.77252682772152,2.80924522409647,4.35371036353111,4.7671439233159,6.19181798667996,5.79421629724277,5.78727661391115,5.35711671044299,4.41596760403192,5.14303878578123,3.72699192934609,4.05341522910446,4.94177816549917,4.23492211868988,3.89227196301712,4.93905526756486,2.10455769150274,3.93831930152999,3.36685362994643,5.81311588808453,4.92522411877817,5.32000356120596,5.57772628269478,3.08650577569826,3.74715866906919,3.74290573512653,6.44613162144895,14.1553365730944,9.26483960301965,7.41977073985349
|short_description=p2@Smyd2
|short_description=p2@Smyd2
}}
}}

Latest revision as of 23:45, 26 September 2015

Short description:p2@Smyd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smyd2_5end
Coexpression cluster:MCL_coexpression_mm9:19
Association with transcript: -8bp_to_ENSMUST00000027897_5end
EntrezGene:Smyd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smyd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D916.13
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F518.60
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.61
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.15
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F512.20
heart, embryo E13.CNhs11013.376-3I916.39
heart, embryo E14.CNhs10597.403-26D420.12
heart, embryo E15.CNhs11017.431-16C829.71
heart, embryo E16.CNhs11021.457-17C626.38
heart, embryo E17.CNhs11025.479-18E530.00
heart, embryo E18.CNhs11030.1283-20G330.85
heart, neonate N00.CNhs11213.639-21E334.21
heart, neonate N03.CNhs11221.1349-25I232.91
heart, neonate N10.CNhs11118.749-24G125.94
heart, neonate N16.CNhs11209.782-15G122.46
heart, neonate N20.CNhs11127.821-26I622.95
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D213.29
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G73.93
kidney, neonate N10.CNhs11206.758-6D54.17
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C243.42
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F24.23
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G33.39
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.95
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.04
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.54
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G72.41
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C614.16
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube3.73e-1147
cardiovascular system1.91e-1023
circulatory system1.91e-1023
primary circulatory organ1.18e-0918
heart1.18e-0918
primitive heart tube1.18e-0918
primary heart field1.18e-0918
anterior lateral plate mesoderm1.18e-0918
heart tube1.18e-0918
heart primordium1.18e-0918
cardiac mesoderm1.18e-0918
cardiogenic plate1.18e-0918
heart rudiment1.18e-0918
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:191746250..191746272,-&oldid=4280992"