Personal tools

FFCP PHASE1:Mm9::chr3:80606526..80606539,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14800
|EntrezGene=14800
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|association_with_transcript=173bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|association_with_transcript=173bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|cluster_id=chr3:80606526..80606539,-
|description=CAGE_peak_4_at_Gria2_5end
|description=CAGE_peak_4_at_Gria2_5end
|id=chr3:80606526..80606539,-
|id=chr3:80606526..80606539,-
|ontology_enrichment_celltype=CL:0000540!1.44e-14!33;CL:0000047!1.44e-14!33;CL:0000031!1.44e-14!33;CL:0000404!1.44e-14!33;CL:0000117!4.50e-13!23;CL:0000337!4.50e-13!23;CL:0000221!3.25e-12!44;CL:0000133!3.25e-12!44;CL:0002319!4.50e-12!43;CL:0000393!2.72e-10!39;CL:0000211!2.72e-10!39;CL:0000055!1.87e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.53e-17,23;CL:0000337,1.53e-17,23;CL:0000540,8.65e-16,33;CL:0000047,8.65e-16,33;CL:0000031,8.65e-16,33;CL:0000404,8.65e-16,33;CL:0000393,5.32e-12,39;CL:0000211,5.32e-12,39;CL:0002319,4.22e-10,43;CL:0000221,1.10e-09,44;CL:0000133,1.10e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!4.04e-32!102;UBERON:0000924!4.04e-32!102;UBERON:0006601!4.04e-32!102;UBERON:0001017!1.24e-31!73;UBERON:0005743!1.24e-31!73;UBERON:0000073!1.59e-31!75;UBERON:0001016!1.59e-31!75;UBERON:0002346!1.04e-30!71;UBERON:0003075!1.04e-30!71;UBERON:0007284!1.04e-30!71;UBERON:0001049!3.17e-26!52;UBERON:0005068!3.17e-26!52;UBERON:0006241!3.17e-26!52;UBERON:0007135!3.17e-26!52;UBERON:0000033!4.42e-25!63;UBERON:0000955!6.98e-25!50;UBERON:0006238!6.98e-25!50;UBERON:0002616!4.65e-24!49;UBERON:0003056!2.98e-22!49;UBERON:0002020!1.75e-20!34;UBERON:0003080!8.55e-20!40;UBERON:0002780!4.87e-19!39;UBERON:0001890!4.87e-19!39;UBERON:0006240!4.87e-19!39;UBERON:0002791!4.35e-17!29;UBERON:0003528!4.35e-17!29;UBERON:0001893!4.35e-17!29;UBERON:0007811!2.50e-12!86;UBERON:0000956!3.33e-12!21;UBERON:0001869!3.33e-12!21;UBERON:0000203!3.33e-12!21;UBERON:0000153!2.18e-10!94;UBERON:0002619!2.89e-10!17;UBERON:0002021!2.52e-09!10;UBERON:0000411!2.52e-09!10;UBERON:0001950!2.52e-09!10;UBERON:0003076!5.92e-07!12;UBERON:0003057!5.92e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.59e-33,73;UBERON:0000073,2.89e-33,54;UBERON:0001016,4.14e-32,75;UBERON:0002346,2.14e-31,64;UBERON:0003075,2.14e-31,64;UBERON:0007284,2.14e-31,64;UBERON:0001049,2.59e-31,52;UBERON:0005068,2.59e-31,52;UBERON:0006241,2.59e-31,52;UBERON:0007135,2.59e-31,52;UBERON:0002020,6.64e-27,34;UBERON:0000955,1.30e-26,47;UBERON:0006238,1.30e-26,47;UBERON:0004121,1.71e-26,95;UBERON:0000924,1.71e-26,95;UBERON:0006601,1.71e-26,95;UBERON:0002616,1.55e-25,46;UBERON:0010371,2.44e-25,73;UBERON:0003080,2.59e-23,40;UBERON:0003056,7.61e-23,49;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0003528,3.33e-22,29;UBERON:0002791,3.33e-22,29;UBERON:0001893,3.33e-22,29;UBERON:0010314,3.33e-18,92;UBERON:0000956,1.88e-15,21;UBERON:0001869,1.88e-15,21;UBERON:0000203,1.88e-15,21;UBERON:0002619,9.21e-13,17;UBERON:0002021,2.44e-12,10;UBERON:0000411,2.44e-12,10;UBERON:0001950,2.44e-12,10;UBERON:0003076,2.70e-08,12;UBERON:0003057,2.70e-08,12;UBERON:0002420,6.45e-08,8;UBERON:0007245,6.45e-08,8;UBERON:0010009,6.45e-08,8;UBERON:0010011,6.45e-08,8;UBERON:0000454,6.45e-08,8;UBERON:0002240,8.73e-07,6;UBERON:0005174,8.73e-07,6;UBERON:0001137,8.73e-07,6
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.58328969722285,0,0,0,0,0,0,0,0,2.02316460859598,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,2.7996195323289,2.16009501330705,2.52389953621658,7.42692559449889,7.50953039235486,2.20483438586917,1.72521847832825,1.83843757322004,8.8092704799511,14.5563565417114,13.9781945263182,3.42904348098504,4.48289453651807,3.64639359389732,5.862842979029,12.380777420697,12.071061574368,14.7314292736834,19.7896636310753,6.33758115806022,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,2.07818994690755,0,0.608930956624282,0.461230994512117,0.60289056221049,1.64624189989987,0.376999773989026,0,0.144599356919912,0,0,0,0,0,27.5213949190854,27.4375185925626,0,0,0,0,27.2618963716777,17.3850229071078,6.28271760564322,45.5419718903764,43.2159122888259,21.1943805450751,27.0942909323155,0.101839363850316,0.248813941220186,0.758168275301024,1.68353484709179,0.260240885925407,0.689706313300419,0.360124259610698,0.90422890701429,2.04109497453984,2.3060469651273,2.15513966487376,4.39795730256327,0,0.189106080167819,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.5255283754928,10.0846520131699,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,10.1146871692309,17.1129062424617,0,0,0.94652465824877,1.56175497718655,3.87762115919038,0.238968797952552,0.668396022247182,1.69845918473299,0.809621403349789,2.33804686329049,4.34816555741176,32.1321316421807,0,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.36012218806262,0,0.428674070063185,2.12808280370728,2.31879462882692,1.81003922662333,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,14.8340241608408,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,37.2736216127264,37.7466693935885,32.6550442660456,31.1054260042075,34.2541259885321,33.2373314851468,33.0761025113585,36.9263386643861,34.8919654917838,31.583379016861,0.415149390336707,1.99512436700516,1.36586884603307,0.729320151204882,0.419226325255965,1.47074806760011,2.889207461421,3.5025959730612,1.92551525755089,3.53776096469316,3.29523089857312,4.14977951049368,3.55837728385553,3.26528277264833,2.98664438569189,1.42888107384922,1.39061191133827,3.27945674788299,4.12085900803307,3.38557516309114,3.42869252385415,2.30718548007139,4.05341522910446,2.32554266611726,2.35273451038327,2.876896668317,2.92684756596436,2.10455769150274,1.90125759384206,3.36685362994643,1.66089025373844,3.84167481264697,2.04615521584845,2.32405261778949,2.50778594275484,2.74791635731741,0.935726433781634,1.93383948643468,1.53030665655075,0.441182838239031,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.58328969722285,0,0,0,0,0,0,0,0,2.02316460859598,4.23192783417626,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,2.7996195323289,2.16009501330705,2.52389953621658,7.42692559449889,7.50953039235486,2.20483438586917,1.72521847832825,1.83843757322004,8.8092704799511,14.5563565417114,13.9781945263182,3.42904348098504,4.48289453651807,3.64639359389732,5.862842979029,12.380777420697,12.071061574368,14.7314292736834,19.7896636310753,6.33758115806022,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.5709193985953,0,2.07818994690755,0,0.608930956624282,0.461230994512117,0.60289056221049,1.64624189989987,0.376999773989026,0,0.144599356919912,0,0,0,0,0,27.5213949190854,27.4375185925626,0,0,0,0,27.2618963716777,17.3850229071078,6.28271760564322,45.5419718903764,43.2159122888259,21.1943805450751,27.0942909323155,0.101839363850316,0.248813941220186,0.758168275301024,1.68353484709179,0.260240885925407,0.689706313300419,0.360124259610698,0.90422890701429,2.04109497453984,2.3060469651273,2.15513966487376,4.39795730256327,0,0.189106080167819,0.527853372491847,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.5255283754928,10.0846520131699,0,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,10.1146871692309,17.1129062424617,0,0,0.94652465824877,1.56175497718655,3.87762115919038,0.238968797952552,0.668396022247182,1.69845918473299,0.809621403349789,2.33804686329049,4.34816555741176,32.1321316421807,0,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,2.7235168460303,0.36012218806262,0,0.428674070063185,2.12808280370728,2.31879462882692,1.81003922662333,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,14.8340241608408,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,37.2736216127264,37.7466693935885,32.6550442660456,31.1054260042075,34.2541259885321,33.2373314851468,33.0761025113585,36.9263386643861,34.8919654917838,31.583379016861,0.415149390336707,1.99512436700516,1.36586884603307,0.729320151204882,0.419226325255965,1.47074806760011,2.889207461421,3.5025959730612,1.92551525755089,3.53776096469316,3.29523089857312,4.14977951049368,3.55837728385553,3.26528277264833,2.98664438569189,1.42888107384922,1.39061191133827,3.27945674788299,4.12085900803307,3.38557516309114,3.42869252385415,2.30718548007139,4.05341522910446,2.32554266611726,2.35273451038327,2.876896668317,2.92684756596436,2.10455769150274,1.90125759384206,3.36685362994643,1.66089025373844,3.84167481264697,2.04615521584845,2.32405261778949,2.50778594275484,2.74791635731741,0.935726433781634,1.93383948643468,1.53030665655075,0.441182838239031,0.927471342481686
|short_description=p4@Gria2
|short_description=p4@Gria2
}}
}}

Latest revision as of 17:43, 25 September 2015

Short description:p4@Gria2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Gria2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 173bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end
EntrezGene:Gria2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Gria2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B227.52
cerebellum, neonate N30.CNhs11135.1395-42I227.44
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.26
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D545.54
cortex, neonate N30.CNhs11107.1392-42F243.22
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E847.53
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.11
medulla oblongata, neonate N30.CNhs11200.1396-42A317.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I932.13
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.58
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.53e-1723
neuroblast (sensu Vertebrata)1.53e-1723
neuron8.65e-1633
neuronal stem cell8.65e-1633
neuroblast8.65e-1633
electrically signaling cell8.65e-1633
electrically responsive cell5.32e-1239
electrically active cell5.32e-1239
neural cell4.22e-1043
ectodermal cell1.10e-0944
neurectodermal cell1.10e-0944

Uber anatomy
Ontology termp-valuen
central nervous system1.59e-3373
regional part of nervous system2.89e-3354
nervous system4.14e-3275
neurectoderm2.14e-3164
neural plate2.14e-3164
presumptive neural plate2.14e-3164
neural tube2.59e-3152
neural rod2.59e-3152
future spinal cord2.59e-3152
neural keel2.59e-3152
gray matter6.64e-2734
brain1.30e-2647
future brain1.30e-2647
ectoderm-derived structure1.71e-2695
ectoderm1.71e-2695
presumptive ectoderm1.71e-2695
regional part of brain1.55e-2546
ecto-epithelium2.44e-2573
anterior neural tube2.59e-2340
pre-chordal neural plate7.61e-2349
regional part of forebrain2.67e-2239
forebrain2.67e-2239
future forebrain2.67e-2239
brain grey matter3.33e-2229
regional part of telencephalon3.33e-2229
telencephalon3.33e-2229
structure with developmental contribution from neural crest3.33e-1892
cerebral cortex1.88e-1521
cerebral hemisphere1.88e-1521
pallium1.88e-1521
regional part of cerebral cortex9.21e-1317
occipital lobe2.44e-1210
visual cortex2.44e-1210
neocortex2.44e-1210
posterior neural tube2.70e-0812
chordal neural plate2.70e-0812
basal ganglion6.45e-088
nuclear complex of neuraxis6.45e-088
aggregate regional part of brain6.45e-088
collection of basal ganglia6.45e-088
cerebral subcortex6.45e-088
spinal cord8.73e-076
dorsal region element8.73e-076
dorsum8.73e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:80606526..80606539,-&oldid=4205248"