FFCP PHASE1:Mm9::chr3:65778652..65778665,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:65778652..65778665,- | |||
|description=CAGE_peak_at_chr3:65778652..65778665,- | |description=CAGE_peak_at_chr3:65778652..65778665,- | ||
|id=chr3:65778652..65778665,- | |id=chr3:65778652..65778665,- | ||
|ontology_enrichment_celltype=CL:0002563!3.49e-09!9;CL:0002251!3.49e-09!9;CL:0000063!3.64e-09!66;CL:0000542!1.53e-07!13;CL:0000051!1.53e-07!13;CL:0000791!3.17e-07!9;CL:0000789!3.17e-07!9;CL:0002420!3.17e-07!9;CL:0002419!3.17e-07!9;CL:0000790!3.17e-07!9;CL:0000075!3.49e-07!7;CL:0000838!3.80e-07!12;CL:0000988!9.99e-07!32;CL:0002032!9.99e-07!32;CL:0000037!9.99e-07!32;CL:0000566!9.99e-07!32;CL:0000837!9.99e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.10e-15,9;CL:0002251,5.10e-15,9;CL:0000223,1.56e-09,20;CL:0002076,5.52e-09,15;CL:0000239,1.46e-08,6;CL:0000677,1.46e-08,6;CL:0000584,1.46e-08,6;CL:0002250,2.18e-08,3;CL:0000066,1.51e-07,25;CL:0000075,2.07e-07,7;CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.20e-18,3;DOID:4045,8.20e-18,3;DOID:0050686,3.35e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.49e-09!9;UBERON:0004808!3.49e-09!9;UBERON:0001277!3.49e-09!9;UBERON:0000485!1.39e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.10e-15,9;UBERON:0004808,5.10e-15,9;UBERON:0001277,5.10e-15,9;UBERON:0000485,2.79e-12,11;UBERON:0001242,2.21e-10,13;UBERON:0001262,2.21e-10,13;UBERON:0004786,2.21e-10,13;UBERON:0000344,5.52e-09,15;UBERON:0000490,3.86e-07,66;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,1.20985684522732,1.50268718983904,0.503637815735669,0.934450562382103,0.774739940649458,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,1.71200729931206,0.437102012094987,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0,0,5.19932915552294,0.664938581433969,2.85837098767317,5.4409111995798,7.0320181007142,3.14114246384279,15.8822501768374,12.294818729252,5.34061388334269,0.125896817975577,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,5.79728977403356,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0.702213187313235,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0.493647061806363,0,0,0.42366414172764,0,0,0,0.120625849856312,0,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,1.38199973804424,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.81999695755814,1.20985684522732,1.50268718983904,0.503637815735669,0.934450562382103,0.774739940649458,0.985521055061667,0.468129052643987,0.171217968225505,0.159544317990673,1.71200729931206,0.437102012094987,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,0,0,5.19932915552294,0.664938581433969,2.85837098767317,5.4409111995798,7.0320181007142,3.14114246384279,15.8822501768374,12.294818729252,5.34061388334269,0.125896817975577,0,0,0.782391344348039,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,5.79728977403356,0,0.679971333707751,0,0.649776417447669,0,0,0,0,0,0.422530259330042,0,0,0,0.432982082022428,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0.130120442962704,0,0.360124259610698,0,0.136072998302656,0.12811372028485,0.281105173679186,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0.702213187313235,1.54408744268829,0.852490498186778,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0.238968797952552,0,0,0,0,0.395287777946524,0,0,0,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0,0,0.493647061806363,0,0,0.42366414172764,0,0,0,0.120625849856312,0,0.164140899745061,0,0,0,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0.679913719975421,0.839708713941948,1.38199973804424,0,0,0,0.108005340821801,0.418176592028937,0.436725127492355,0,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:65778652..65778665,- | |short_description=p@chr3:65778652..65778665,- | ||
}} | }} |
Latest revision as of 23:08, 3 August 2015
Short description: | p@chr3:65778652..65778665, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:65778652..65778665, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.10e-15 | 9 |
epithelial cell of alimentary canal | 5.10e-15 | 9 |
endodermal cell | 1.56e-09 | 20 |
endo-epithelial cell | 5.52e-09 | 15 |
brush border epithelial cell | 1.46e-08 | 6 |
gut absorptive cell | 1.46e-08 | 6 |
enterocyte | 1.46e-08 | 6 |
intestinal crypt stem cell | 2.18e-08 | 3 |
epithelial cell | 1.51e-07 | 25 |
columnar/cuboidal epithelial cell | 2.07e-07 | 7 |
lining cell | 4.10e-07 | 1 |
meso-epithelial cell | 4.10e-07 | 1 |
endothelial cell | 4.10e-07 | 1 |
endothelial cell of sinusoid | 4.10e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.10e-15 | 9 |
gastrointestinal system epithelium | 5.10e-15 | 9 |
intestinal epithelium | 5.10e-15 | 9 |
simple columnar epithelium | 2.79e-12 | 11 |
intestinal mucosa | 2.21e-10 | 13 |
wall of intestine | 2.21e-10 | 13 |
gastrointestinal system mucosa | 2.21e-10 | 13 |
mucosa | 5.52e-09 | 15 |
unilaminar epithelium | 3.86e-07 | 66 |
bile duct | 4.10e-07 | 1 |
hepatic sinusoid | 4.10e-07 | 1 |
parenchyma | 4.10e-07 | 1 |
abdomen blood vessel | 4.10e-07 | 1 |
sinusoid | 4.10e-07 | 1 |
digestive system duct | 4.10e-07 | 1 |
abdominal segment blood vessel | 4.10e-07 | 1 |
trunk blood vessel | 4.10e-07 | 1 |
liver parenchyma | 4.10e-07 | 1 |
liver lobule | 4.10e-07 | 1 |
biliary system | 4.10e-07 | 1 |
biliary tree | 4.10e-07 | 1 |
biliary bud | 4.10e-07 | 1 |
hepatic duct | 4.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.20e-18 | 3 |
muscle cancer | 8.20e-18 | 3 |
organ system cancer | 3.35e-15 | 6 |