FFCP PHASE1:Mm9::chr11:100599428..100599454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19345 | |EntrezGene=19345 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P35278,Q3TJ39,Q8C458 | |UniProt=P35278,Q3TJ39,Q8C458 | ||
|association_with_transcript=0bp_to_NM_024456,uc007lme.1,uc011yff.1_5end | |association_with_transcript=0bp_to_NM_024456,uc007lme.1,uc011yff.1_5end | ||
|cluster_id=chr11:100599428..100599454,- | |||
|description=CAGE_peak_2_at_Rab5c_5end | |description=CAGE_peak_2_at_Rab5c_5end | ||
|id=chr11:100599428..100599454,- | |id=chr11:100599428..100599454,- | ||
|ontology_enrichment_celltype=CL:0000055!4.06e-09!50;CL:0000221!8.09e-08!44;CL:0000133!8.09e-08!44;CL:0002319!8.83e-08!43 | |ontology_enrichment_celltype=CL:0000055!4.06e-09!50;CL:0000221!8.09e-08!44;CL:0000133!8.09e-08!44;CL:0002319!8.83e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.09e-08,44;CL:0000133,8.09e-08,44;CL:0002319,8.83e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-12!73;UBERON:0005743!1.27e-12!73;UBERON:0000073!1.54e-12!75;UBERON:0001016!1.54e-12!75;UBERON:0001049!1.18e-10!52;UBERON:0005068!1.18e-10!52;UBERON:0006241!1.18e-10!52;UBERON:0007135!1.18e-10!52;UBERON:0000955!3.46e-09!50;UBERON:0006238!3.46e-09!50;UBERON:0002616!6.22e-09!49;UBERON:0002346!8.84e-09!71;UBERON:0003075!8.84e-09!71;UBERON:0007284!8.84e-09!71;UBERON:0002020!4.00e-08!34;UBERON:0004121!4.78e-08!102;UBERON:0000924!4.78e-08!102;UBERON:0006601!4.78e-08!102;UBERON:0003080!2.83e-07!40;UBERON:0002780!7.01e-07!39;UBERON:0001890!7.01e-07!39;UBERON:0006240!7.01e-07!39;UBERON:0000033!9.13e-07!63 | |ontology_enrichment_uberon=UBERON:0001017!1.27e-12!73;UBERON:0005743!1.27e-12!73;UBERON:0000073!1.54e-12!75;UBERON:0001016!1.54e-12!75;UBERON:0001049!1.18e-10!52;UBERON:0005068!1.18e-10!52;UBERON:0006241!1.18e-10!52;UBERON:0007135!1.18e-10!52;UBERON:0000955!3.46e-09!50;UBERON:0006238!3.46e-09!50;UBERON:0002616!6.22e-09!49;UBERON:0002346!8.84e-09!71;UBERON:0003075!8.84e-09!71;UBERON:0007284!8.84e-09!71;UBERON:0002020!4.00e-08!34;UBERON:0004121!4.78e-08!102;UBERON:0000924!4.78e-08!102;UBERON:0006601!4.78e-08!102;UBERON:0003080!2.83e-07!40;UBERON:0002780!7.01e-07!39;UBERON:0001890!7.01e-07!39;UBERON:0006240!7.01e-07!39;UBERON:0000033!9.13e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.27e-12,73;UBERON:0001016,1.54e-12,75;UBERON:0000073,3.57e-11,54;UBERON:0001049,1.18e-10,52;UBERON:0005068,1.18e-10,52;UBERON:0006241,1.18e-10,52;UBERON:0007135,1.18e-10,52;UBERON:0002346,4.19e-09,64;UBERON:0003075,4.19e-09,64;UBERON:0007284,4.19e-09,64;UBERON:0000955,1.12e-08,47;UBERON:0006238,1.12e-08,47;UBERON:0002616,2.01e-08,46;UBERON:0004121,3.98e-08,95;UBERON:0000924,3.98e-08,95;UBERON:0006601,3.98e-08,95;UBERON:0002020,4.00e-08,34;UBERON:0003080,2.83e-07,40;UBERON:0002780,7.01e-07,39;UBERON:0001890,7.01e-07,39;UBERON:0006240,7.01e-07,39 | |||
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| ||
|short_description=p2@Rab5c | |short_description=p2@Rab5c | ||
}} | }} |
Latest revision as of 16:42, 26 September 2015
Short description: | p2@Rab5c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rab5c_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_024456, uc007lme.1, uc011yff.1_5end |
EntrezGene: | Rab5c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.09e-08 | 44 |
neurectodermal cell | 8.09e-08 | 44 |
neural cell | 8.83e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.27e-12 | 73 |
nervous system | 1.54e-12 | 75 |
regional part of nervous system | 3.57e-11 | 54 |
neural tube | 1.18e-10 | 52 |
neural rod | 1.18e-10 | 52 |
future spinal cord | 1.18e-10 | 52 |
neural keel | 1.18e-10 | 52 |
neurectoderm | 4.19e-09 | 64 |
neural plate | 4.19e-09 | 64 |
presumptive neural plate | 4.19e-09 | 64 |
brain | 1.12e-08 | 47 |
future brain | 1.12e-08 | 47 |
regional part of brain | 2.01e-08 | 46 |
ectoderm-derived structure | 3.98e-08 | 95 |
ectoderm | 3.98e-08 | 95 |
presumptive ectoderm | 3.98e-08 | 95 |
gray matter | 4.00e-08 | 34 |
anterior neural tube | 2.83e-07 | 40 |
regional part of forebrain | 7.01e-07 | 39 |
forebrain | 7.01e-07 | 39 |
future forebrain | 7.01e-07 | 39 |