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FFCP PHASE1:Mm9::chr3:61168477..61168555,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74012
|EntrezGene=74012
|HGNC=
|HGNC=
|MCL_coexpression_id=38
|TSSclassifier=NA
|UniProt=P61226,Q6ZWR0
|UniProt=P61226,Q6ZWR0
|association_with_transcript=48bp_to_ENSMUST00000049064,NM_028712,uc008pjl.1_5end
|association_with_transcript=48bp_to_ENSMUST00000049064,NM_028712,uc008pjl.1_5end
|cluster_id=chr3:61168477..61168555,+
|description=CAGE_peak_1_at_Rap2b_5end
|description=CAGE_peak_1_at_Rap2b_5end
|id=chr3:61168477..61168555,+
|id=chr3:61168477..61168555,+
|ontology_enrichment_celltype=CL:0000144!6.86e-16!121;CL:0000012!6.86e-16!121;CL:0000055!1.16e-15!50;CL:0000221!3.55e-15!44;CL:0000133!3.55e-15!44;CL:0002371!5.09e-15!118;CL:0002319!5.67e-15!43;CL:0000548!1.01e-13!115;CL:0000004!1.01e-13!115;CL:0000255!1.01e-13!115;CL:0000393!3.22e-12!39;CL:0000211!3.22e-12!39;CL:0000034!8.72e-11!97;CL:0000540!1.43e-10!33;CL:0000047!1.43e-10!33;CL:0000031!1.43e-10!33;CL:0000404!1.43e-10!33;CL:0002321!1.53e-10!70;CL:0000220!1.53e-10!70;CL:0000723!2.82e-09!91;CL:0000048!2.82e-09!91;CL:0000117!3.45e-07!23;CL:0000337!3.45e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000221,3.55e-15,44;CL:0000133,3.55e-15,44;CL:0002319,5.67e-15,43;CL:0000393,3.22e-12,39;CL:0000211,3.22e-12,39;CL:0000034,8.72e-11,97;CL:0000540,1.43e-10,33;CL:0000047,1.43e-10,33;CL:0000031,1.43e-10,33;CL:0000404,1.43e-10,33;CL:0002321,1.54e-10,70;CL:0000723,2.82e-09,91;CL:0000048,2.82e-09,91;CL:0000117,3.45e-07,23;CL:0000337,3.45e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.19e-17!75;UBERON:0001016!1.19e-17!75;UBERON:0001017!1.13e-16!73;UBERON:0005743!1.13e-16!73;UBERON:0002020!1.12e-13!34;UBERON:0002791!1.15e-12!29;UBERON:0003528!1.15e-12!29;UBERON:0001893!1.15e-12!29;UBERON:0004121!1.99e-12!102;UBERON:0000924!1.99e-12!102;UBERON:0006601!1.99e-12!102;UBERON:0002780!8.85e-11!39;UBERON:0001890!8.85e-11!39;UBERON:0006240!8.85e-11!39;UBERON:0000956!1.16e-10!21;UBERON:0001869!1.16e-10!21;UBERON:0000203!1.16e-10!21;UBERON:0003080!2.08e-10!40;UBERON:0000955!1.17e-09!50;UBERON:0006238!1.17e-09!50;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0002616!2.67e-09!49;UBERON:0003056!7.59e-09!49;UBERON:0002619!9.11e-09!17;UBERON:0000033!1.90e-08!63;UBERON:0000153!3.18e-08!94;UBERON:0007811!6.87e-08!86;UBERON:0002346!8.18e-07!71;UBERON:0003075!8.18e-07!71;UBERON:0007284!8.18e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.19e-17,75;UBERON:0001017,1.13e-16,73;UBERON:0004121,3.84e-15,95;UBERON:0000924,3.84e-15,95;UBERON:0006601,3.84e-15,95;UBERON:0002020,1.12e-13,34;UBERON:0003528,1.15e-12,29;UBERON:0002791,1.15e-12,29;UBERON:0001893,1.15e-12,29;UBERON:0002780,8.85e-11,39;UBERON:0001890,8.85e-11,39;UBERON:0006240,8.85e-11,39;UBERON:0000956,1.16e-10,21;UBERON:0001869,1.16e-10,21;UBERON:0000203,1.16e-10,21;UBERON:0000073,1.90e-10,54;UBERON:0003080,2.08e-10,40;UBERON:0001049,1.76e-09,52;UBERON:0005068,1.76e-09,52;UBERON:0006241,1.76e-09,52;UBERON:0007135,1.76e-09,52;UBERON:0010371,2.44e-09,73;UBERON:0002346,3.95e-09,64;UBERON:0003075,3.95e-09,64;UBERON:0007284,3.95e-09,64;UBERON:0000955,4.70e-09,47;UBERON:0006238,4.70e-09,47;UBERON:0003056,7.59e-09,49;UBERON:0002619,9.11e-09,17;UBERON:0002616,1.06e-08,46
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.1271211688392,11.5732158785474,9.03591120778299,12.9765925488777,10.9937495633292,13.73918716893,11.1841076355647,3.38215763210514,12.5593898676942,16.2149320647956,21.7785330945333,17.6948958164492,14.8681390431885,22.1805181040475,26.171081353634,17.8260885523708,9.66336483304024,12.3852902690882,12.324433704499,16.6234676537935,13.5578463457572,10.783428307157,11.2786818270513,14.1063761894698,13.2214994471966,12.1105412283153,14.337235892637,15.165154524345,14.7206230299787,14.7161399917026,19.0499446447852,20.336580979593,13.1503622496823,22.1985953374065,20.6341870201794,23.1680770582428,12.3641340180602,11.2609485270709,12.6374620744413,21.2224695288275,5.517293144389,19.7663144915973,27.1591889539234,31.5092532391668,29.2150409984269,32.1988784292202,29.4603619981983,26.3258775090404,28.8205570063501,24.0165476761628,26.4057758993428,16.6059756134683,19.5522187966505,17.9270286041841,12.398442570483,17.8171188233785,16.3620722520513,10.2233494788743,10.0957178047058,11.5530915453053,10.8659801058433,10.1391719956096,11.8834595073228,10.5814903440967,13.2532065478079,11.4870937911227,9.52587382566147,13.6743504614929,12.5390993301408,14.4230065281157,10.5983222496766,8.57173130963539,12.0683548188349,10.4911923576821,11.1916740806893,10.9166881281784,11.9306597127264,11.7073902638574,9.2074399003245,11.5433496768983,10.661703161497,10.914421667424,13.3966096030766,11.867700251921,14.2541893891089,10.6098636039628,21.7335202806013,15.9073493742878,14.396360621236,10.1382815996487,15.4413993383661,11.5933917810211
|phase1_expression=15.534438169165,38.7362702479691,45.9549231783431,9.37639055051173,18.5331420080148,12.5909453933917,9.1108929832255,28.9236244509131,23.65250532148,27.1514850533512,10.6155140299813,9.25357044345902,22.9408978107816,25.9638595184422,10.3264026162855,9.51633756732182,9.09430441566591,13.8803352757625,12.614527891728,11.8829102503448,10.0351082378262,9.33334941288322,8.8807928307238,13.1193786690593,15.3704218315004,32.1569899904411,29.7225777349762,20.6852383378453,9.5011709728187,6.04872311423834,19.2905544270115,12.065582795733,11.0711661765223,0,3.17736781726402,3.49092755252834,3.26670970019791,31.3898723052681,31.253413780952,22.5115209908733,24.7057224973026,37.5675016727145,25.24653835762,20.8988717839458,20.5795170375615,17.0698479510364,32.8604364626176,20.494364699762,32.0741826792329,21.5817187972455,23.5177188330609,21.5628846547457,9.89917375740644,34.0920206745332,18.4851589528355,23.1533492432352,22.6361417551618,29.3933092598142,19.624696703381,18.5146842745212,25.9870875437533,58.2812595158907,20.4537803105562,150.283252785994,150.30768711018,167.67330712728,100.965237244702,76.4594427589894,28.7220226094483,29.5663004946403,27.1319200143283,23.9946826899195,31.1424642741775,25.8455586343553,23.9613677545591,26.6573448116906,16.5173821499083,21.7068474744819,21.5049146558741,17.9365351313064,23.7867873366265,19.7947080811569,14.7966989470732,23.0732670112989,23.9893249009592,19.7401152267357,16.0879999302986,15.4711540034999,23.020762773288,51.2375177524006,19.4209207430124,6.0229671388697,3.39985666853875,0,0.649776417447669,1.79210754838934,7.44355426698285,12.4414135481982,13.2490862347463,12.3668851078619,20.4222958676187,12.8326477414318,5.09610479413291,7.11066703153331,37.0199680129176,40.7909383414909,32.3535644809461,6.2801133845483,9.32176381129818,9.79718117827843,12.3174582003956,8.52503339273995,9.91646638201052,6.93324146542064,10.5829836422134,9.42499434972566,3.46072954828123,9.39895819979426,12.3845477272982,12.4560474459505,14.3546986999256,6.78825354389311,7.45567044872489,3.51336956413857,6.70229461803056,8.9409969323007,23.1243190296426,8.39863823390771,23.8892026897362,11.5338792341713,40.2600530480391,23.7486725493314,27.8118912307642,36.8230258555676,13.714010940931,27.5810147215188,17.5163705822544,11.1966273549084,6.82351447770922,11.3638602178696,12.6216829673823,13.7941262660084,15.48534316326,12.5084998803643,14.0835553243249,13.0675994690547,11.8064172945258,10.8655415710387,13.7963515477019,15.3175924935934,16.5394056714112,16.001288467213,15.0145514581823,18.4573648256748,16.2567887762275,15.1266042782055,15.4486901208912,14.411482798424,14.7765019685708,13.4631752148076,14.0715635988658,12.244220179349,10.180023630164,11.4123254413494,11.8785676923281,9.76642567951713,11.8040296615832,8.29033930806903,9.87359099480883,9.68588038066662,7.86367452594801,8.91819923294527,9.66020507280623,5.90508242545636,37.6419007929788,31.488811388061,9.25172592354634,4.23120906661671,16.423195291213,13.9342003116263,10.1805294444454,8.26902450955704,6.67134131534611,7.03834816616469,8.0669940462567,6.58795818896044,6.53471542880701,6.76452004939913,6.82374304916921,7.19055526923377,7.99710784536369,7.36822711041159,12.3284135619503,11.3106027483632,3.38123207019241,8.5533557695032,8.92181440971078,9.8190147846446,7.3986748435381,4.87113488332687,4.86696056308262,4.93588655687202,3.26097889795864,6.84064933435986,10.614185736113,8.09503604585473,6.8972441272091,7.47649195232492,6.62027214631691,6.32931502391783,6.16113861745134,6.31491250332587,8.62609239164127,10.0478055870496,12.4815069245824,4.04126204715379,2.51156378930677,6.27176577772377,8.86815312799702,14.9698215298683,10.5927234687317,12.7308814331391,7.51008794523207,9.38035041674168,6.18913466303636,13.2690880543303,13.0837169608139,11.7376285513851,16.2643864030637,9.83179888294428,13.4694285855399,13.7416605652436,55.7927750575307,64.7247763744264,5.90117127622843,8.82997588175144,8.99083303931635,12.1900154055891,22.4590875166045,8.58401152494868,20.5080342620567,22.2550084249084,22.8348801596767,31.0659437338318,34.0881971346063,27.1753469557279,23.074209995469,28.0565623594859,24.5078422326845,24.0990987316355,20.2974321847824,22.4362660620742,15.8000350572969,11.2179683621324,10.619611067197,8.25454162926937,8.76738315197778,6.60117779145643,8.85905678642318,8.9156192903739,8.5281336745513,9.81541069589265,10.3384239731569,10.4292130118819,8.4334886859999,13.4076206222643,15.6602218646742,15.1251318986301,15.264324686365,14.3605813471167,7.80297028026004,14.8046118609719,14.8094118541909,7.61162372786498,8.68285319835728,7.62595455109753,5.95426674748397,13.8504452470843,15.9849782428946,21.290462499639,24.7100752086493,23.8004304630339,9.32738677215522,10.7546675166096,13.4987995830304,19.4003655885429,12.7784223885101,12.0555812483002,11.3456209008451,13.0403558727718,20.0574547392749,20.2929605869304,23.6321955205565,3.81868247206045,14.3932877079417,11.1825706919767,11.2325554454673,12.1271211688392,11.5732158785474,9.03591120778299,12.9765925488777,10.9937495633292,13.73918716893,11.1841076355647,3.38215763210514,12.5593898676942,16.2149320647956,21.7785330945333,17.6948958164492,14.8681390431885,22.1805181040475,26.171081353634,17.8260885523708,9.66336483304024,12.3852902690882,12.324433704499,16.6234676537935,13.5578463457572,10.783428307157,11.2786818270513,14.1063761894698,13.2214994471966,12.1105412283153,14.337235892637,15.165154524345,14.7206230299787,14.7161399917026,19.0499446447852,20.336580979593,13.1503622496823,22.1985953374065,20.6341870201794,23.1680770582428,12.3641340180602,11.2609485270709,12.6374620744413,21.2224695288275,5.517293144389,19.7663144915973,27.1591889539234,31.5092532391668,29.2150409984269,32.1988784292202,29.4603619981983,26.3258775090404,28.8205570063501,24.0165476761628,26.4057758993428,16.6059756134683,19.5522187966505,17.9270286041841,12.398442570483,17.8171188233785,16.3620722520513,10.2233494788743,10.0957178047058,11.5530915453053,10.8659801058433,10.1391719956096,11.8834595073228,10.5814903440967,13.2532065478079,11.4870937911227,9.52587382566147,13.6743504614929,12.5390993301408,14.4230065281157,10.5983222496766,8.57173130963539,12.0683548188349,10.4911923576821,11.1916740806893,10.9166881281784,11.9306597127264,11.7073902638574,9.2074399003245,11.5433496768983,10.661703161497,10.914421667424,13.3966096030766,11.867700251921,14.2541893891089,10.6098636039628,21.7335202806013,15.9073493742878,14.396360621236,10.1382815996487,15.4413993383661,11.5933917810211
|short_description=p1@Rap2b
|short_description=p1@Rap2b
}}
}}

Latest revision as of 15:33, 25 September 2015

Short description:p1@Rap2b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rap2b_5end
Coexpression cluster:MCL_coexpression_mm9:38
Association with transcript: 48bp_to_ENSMUST00000049064, NM_028712, uc008pjl.1_5end
EntrezGene:Rap2b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rap2b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I538.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I645.95
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.25
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.37
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I129.72
GP2+ M cell, pool3.CNhs13240.11847-124I220.69
Ileum epithelium, pool1.CNhs13199.10252-104B99.50
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H131.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.07
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.07
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.09
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.64
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.39
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C658.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7150.28
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7150.31
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2167.67
Mouse Microglia, donor1.CNhs12629.11718-123C8100.97
Mouse Microglia, donor2.CNhs12634.11736-123E876.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.13
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.85
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.94
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.79
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D923.02
Mouse Schwann, donor2.CNhs12573.11746-123F951.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.02
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G240.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.35
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C110.58
adrenal gland, neonate N25.CNhs11223.1377-27I39.42
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A614.35
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H78.94
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C723.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D423.89
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D840.26
corpus striatum, neonate N00.CNhs11226.630-43F123.75
cortex, adult.CNhs10473.12-14D527.81
cortex, neonate N30.CNhs11107.1392-42F236.82
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B227.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.20
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G411.36
eyeball, embryo E12.CNhs11016.345-16C612.62
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C915.49
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E713.07
eyeball, neonate N02.CNhs11205.1551-44G811.81
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H215.32
forelimb, embryo E13.CNhs10589.384-1E216.54
forelimb, embryo E14.CNhs10577.413-26A816.00
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B516.26
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.78
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F514.07
heart, embryo E13.CNhs11013.376-3I912.24
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C611.88
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E38.29
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G17.86
heart, neonate N20.CNhs11127.821-26I68.92
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E837.64
hippocampus, neonate N00.CNhs11228.627-43G131.49
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I516.42
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F26.76
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I912.33
kidney, embryo E15.CNhs10997.434-16F811.31
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G79.82
kidney, neonate N10.CNhs11206.758-6D57.40
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H14.94
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G214.97
lung, embryo E14.CNhs10604.404-26F810.59
lung, embryo E15.CNhs11020.432-17C512.73
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A69.38
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E513.08
lung, neonate N07.CNhs11111.715-19A311.74
lung, neonate N10.CNhs11219.750-23E616.26
lung, neonate N20.CNhs11109.822-18A49.83
lung, neonate N25.CNhs11119.1359-25C713.47
lung, neonate N30.CNhs11133.1394-42H213.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A155.79
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A164.72
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C28.99
medulla oblongata, neonate N30.CNhs11200.1396-42A312.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C722.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.18
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.51
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I720.30
ovary, embryo E18.CNhs11040.505-44H722.44
ovary, neonate N00.CNhs11217.1299-22I415.80
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E615.13
pituitary gland, embryo E13.CNhs11009.370-44C715.26
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I78.68
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C313.85
skin, neonate N00.CNhs11124.650-25G415.98
skin, neonate N03.CNhs11215.662-22H321.29
skin, neonate N06.CNhs11097.693-20I524.71
skin, neonate N10.CNhs11108.762-6C423.80
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G213.50
spleen, embryo E16.CNhs11035.461-43C119.40
spleen, embryo E18.CNhs11011.1271-21F212.78
spleen, neonate N10.CNhs11116.752-24D112.06
spleen, neonate N20.CNhs11112.824-19H111.35
spleen, neonate N25.CNhs11099.1354-25G313.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.63
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D411.23
stomach, embryo E17.CNhs11006.1035-18D512.13
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A912.98
stomach, neonate N25.CNhs11104.1355-25E410.99
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F512.56
testis, embryo E15.CNhs11034.443-27C516.21
testis, embryo E16.CNhs11033.470-26G521.78
testis, embryo E17.CNhs11029.486-18I517.69
testis, embryo E18.CNhs11027.503-18G514.87
testis, neonate N00.CNhs11189.1300-22B722.18
testis, neonate N07.CNhs11222.726-26I426.17
testis, neonate N10.CNhs11204.763-44D917.83
testis, neonate N20.CNhs11110.839-18H39.66
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I416.62
thymus, embryo E15.CNhs11005.430-45I213.56
thymus, embryo E16.CNhs11002.456-26C510.78
thymus, embryo E17.CNhs10581.478-18C111.28
thymus, embryo E18.CNhs10595.1273-19G414.11
thymus, neonate N02.CNhs11181.1541-43F813.22
thymus, neonate N03.CNhs11137.2104-43C712.11
thymus, neonate N06.CNhs11197.681-26C414.34
thymus, neonate N07.CNhs11211.713-19D315.17
thymus, neonate N10.CNhs11194.748-24E414.72
thymus, neonate N20.CNhs11186.820-7A214.72
thymus, neonate N25.CNhs11125.1362-25G719.05
thymus, neonate N30.CNhs11132.1393-42G220.34
tongue, adult.CNhs10499.32-1B413.15
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.17
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F511.26
uterus, adult.CNhs10509.92-27E512.64
vagina, adult.CNhs10502.89-27D521.22
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D729.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A626.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.41
whole body, embryo E11.CNhs11014.324-5I816.61
whole body, embryo E12.CNhs10587.857-27C919.55
whole body, embryo E13.CNhs10512.372-23H217.93
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F216.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G514.25
whole body, embryo E17.5.CNhs10513.490-9F910.61
whole body, embryo E17.CNhs10517.475-3I521.73
whole body, embryo E18.CNhs10516.493-3B315.91
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D115.44
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.55e-1544
neurectodermal cell3.55e-1544
neural cell5.67e-1543
electrically responsive cell3.22e-1239
electrically active cell3.22e-1239
stem cell8.72e-1197
neuron1.43e-1033
neuronal stem cell1.43e-1033
neuroblast1.43e-1033
electrically signaling cell1.43e-1033
embryonic cell1.54e-1070
somatic stem cell2.82e-0991
multi fate stem cell2.82e-0991
CNS neuron (sensu Vertebrata)3.45e-0723
neuroblast (sensu Vertebrata)3.45e-0723

Uber anatomy
Ontology termp-valuen
nervous system1.19e-1775
central nervous system1.13e-1673
ectoderm-derived structure3.84e-1595
ectoderm3.84e-1595
presumptive ectoderm3.84e-1595
gray matter1.12e-1334
brain grey matter1.15e-1229
regional part of telencephalon1.15e-1229
telencephalon1.15e-1229
regional part of forebrain8.85e-1139
forebrain8.85e-1139
future forebrain8.85e-1139
cerebral cortex1.16e-1021
cerebral hemisphere1.16e-1021
pallium1.16e-1021
regional part of nervous system1.90e-1054
anterior neural tube2.08e-1040
neural tube1.76e-0952
neural rod1.76e-0952
future spinal cord1.76e-0952
neural keel1.76e-0952
ecto-epithelium2.44e-0973
neurectoderm3.95e-0964
neural plate3.95e-0964
presumptive neural plate3.95e-0964
brain4.70e-0947
future brain4.70e-0947
pre-chordal neural plate7.59e-0949
regional part of cerebral cortex9.11e-0917
regional part of brain1.06e-0846
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