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FFCP PHASE1:Mm9::chr3:55265789..55265883,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13175
|EntrezGene=13175
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q9JLM6,Q8CCN4,A8IP62,Q8BQN2,Q1EDH1
|UniProt=Q9JLM6,Q8CCN4,A8IP62,Q8BQN2,Q1EDH1
|association_with_transcript=109bp_to_ENSMUST00000070418,NM_001111051,NM_001111052,NM_001195539,NM_001195540,uc008pgn.2,uc008pgo.2,uc008pgp.2,uc008pgq.2,uc008pgr.2,uc012cpq.1,uc012cpr.1_5end
|association_with_transcript=109bp_to_ENSMUST00000070418,NM_001111051,NM_001111052,NM_001195539,NM_001195540,uc008pgn.2,uc008pgo.2,uc008pgp.2,uc008pgq.2,uc008pgr.2,uc012cpq.1,uc012cpr.1_5end
|cluster_id=chr3:55265789..55265883,+
|description=CAGE_peak_2_at_Dclk1_5end
|description=CAGE_peak_2_at_Dclk1_5end
|id=chr3:55265789..55265883,+
|id=chr3:55265789..55265883,+
|ontology_enrichment_celltype=CL:0000221!6.33e-09!44;CL:0000133!6.33e-09!44;CL:0000117!6.98e-09!23;CL:0000337!6.98e-09!23;CL:0002319!9.21e-09!43;CL:0000540!1.57e-07!33;CL:0000047!1.57e-07!33;CL:0000031!1.57e-07!33;CL:0000404!1.57e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-09,23;CL:0000337,1.39e-09,23;CL:0000221,1.18e-08,44;CL:0000133,1.18e-08,44;CL:0002319,1.81e-08,43;CL:0000540,7.51e-07,33;CL:0000047,7.51e-07,33;CL:0000031,7.51e-07,33;CL:0000404,7.51e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.32e-26!75;UBERON:0001016!3.32e-26!75;UBERON:0001017!1.36e-25!73;UBERON:0005743!1.36e-25!73;UBERON:0004121!1.59e-24!102;UBERON:0000924!1.59e-24!102;UBERON:0006601!1.59e-24!102;UBERON:0001049!1.43e-22!52;UBERON:0005068!1.43e-22!52;UBERON:0006241!1.43e-22!52;UBERON:0007135!1.43e-22!52;UBERON:0002346!2.88e-22!71;UBERON:0003075!2.88e-22!71;UBERON:0007284!2.88e-22!71;UBERON:0000955!5.15e-22!50;UBERON:0006238!5.15e-22!50;UBERON:0002616!2.59e-21!49;UBERON:0000033!6.79e-21!63;UBERON:0003056!5.93e-18!49;UBERON:0003080!1.01e-17!40;UBERON:0002780!4.16e-17!39;UBERON:0001890!4.16e-17!39;UBERON:0006240!4.16e-17!39;UBERON:0002020!3.01e-16!34;UBERON:0002791!6.04e-14!29;UBERON:0003528!6.04e-14!29;UBERON:0001893!6.04e-14!29;UBERON:0000153!1.56e-11!94;UBERON:0002619!2.56e-10!17;UBERON:0000956!3.36e-10!21;UBERON:0001869!3.36e-10!21;UBERON:0000203!3.36e-10!21;UBERON:0007811!3.94e-10!86;UBERON:0002021!2.16e-08!10;UBERON:0000411!2.16e-08!10;UBERON:0001950!2.16e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.86e-27,75;UBERON:0001017,2.95e-26,73;UBERON:0000073,5.66e-26,54;UBERON:0002346,3.14e-25,64;UBERON:0003075,3.14e-25,64;UBERON:0007284,3.14e-25,64;UBERON:0004121,3.34e-25,95;UBERON:0000924,3.34e-25,95;UBERON:0006601,3.34e-25,95;UBERON:0001049,1.63e-24,52;UBERON:0005068,1.63e-24,52;UBERON:0006241,1.63e-24,52;UBERON:0007135,1.63e-24,52;UBERON:0010371,3.96e-24,73;UBERON:0000955,1.10e-21,47;UBERON:0006238,1.10e-21,47;UBERON:0002616,6.70e-21,46;UBERON:0003056,4.83e-19,49;UBERON:0003080,1.20e-18,40;UBERON:0002020,4.82e-18,34;UBERON:0002780,6.01e-18,39;UBERON:0001890,6.01e-18,39;UBERON:0006240,6.01e-18,39;UBERON:0003528,2.23e-15,29;UBERON:0002791,2.23e-15,29;UBERON:0001893,2.23e-15,29;UBERON:0010314,3.18e-13,92;UBERON:0002619,1.00e-11,17;UBERON:0000956,4.78e-11,21;UBERON:0001869,4.78e-11,21;UBERON:0000203,4.78e-11,21;UBERON:0002021,1.72e-09,10;UBERON:0000411,1.72e-09,10;UBERON:0001950,1.72e-09,10
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0.140788722151667,0,2.56826952338257,0.0797721589953364,0,0,0,0,0,0,0,0,59.0200433648424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,0,4.14247797122848,5.27246838562732,8.55491555926847,3.63964696225943,1.43752564364972,0,0.725362142011344,0,0.514518872071894,0.286533439938757,0,9.5088736604011,15.869729378161,7.60597684207415,0,1.77858959222228,0,0,0,5.69240209984969,4.99483796918021,1.45165457231869,1.75507719831198,0.420649922702764,12.5686433137674,15.9025349485162,4.16468717330844,5.17565543498476,5.51531271966013,59.4625757396699,72.6540953704718,60.6745806362162,5.93488294785872,10.6125666578795,4.68822033501084,46.902743832232,59.0900740533264,56.8409481729734,14.7314292736834,18.5083185038834,5.96478226640962,3.86203585999239,6.65029728939713,0,0,0,0,0,0,12.4995533917259,0.852151612890289,0.259786004602869,1.06001872353102,3.66192891419369,2.56652954828636,0,7.11066703153331,0,0.760079596425296,0,6.62266502370548,0.258937883647172,0.742210695324124,1.04091196059682,0.304465478312141,0.691846491768175,2.11011696773672,2.23418543557839,1.0053327306374,0,0.144599356919912,0,0.808834249737046,0,0,1.86391761218122,194.113668418656,171.955746293847,0.766371165625774,0,0,0,69.5028566838377,378.810499133823,38.4502317465365,418.568963023002,450.826351273373,102.231717923304,221.946047876692,2.54598409625791,0.124406970610093,0,3.15662783829711,1.56144531555244,1.60931473103431,2.52086981727489,2.71268672104287,2.17716797284249,1.5373646434182,1.3118241438362,9.05461797586555,3.01795190105979,3.02569728268511,4.22282697993477,2.41115305670332,6.39508673218875,4.52727816478817,9.26019613835746,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,242.254020745875,25.5203438700625,0.330418782983798,1.58670339998127,0.426576501070468,0.928946687441754,0.515469845288373,0.403367049246685,0.667134131534611,1.33157938278791,0.474529061544512,1.31759163779209,4.52403375840485,3.97912944082302,2.72949721966768,1.79763881730844,2.37751854862164,1.59313018603494,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,95.3670504527484,90.4874220491809,2.45902418065013,0,1.89304931649754,1.95219372148319,2.80050417052639,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,0.584511715822624,0,330.318313281618,9.22610553853746,1.06839362200353,2.44330439030364,13.3625799607754,0,0.242780636154981,1.209294227859,0.188605079755898,0,0.307435147943927,0.516856586336442,0,1.78248689192361,2.21225730555071,0,0,48.6828636227917,0.720244376125241,0.388076051348264,2.57204442037911,13.1231772895282,11.0588666913284,11.8475294833527,16.745572201303,0.23467170806371,0,0,0.8244312647074,29.8709189387425,10.4944489374991,2.74556391207214,0.492422699235184,2.33184669303881,96.7920076494861,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,1.09181281873089,1.75323650300267,2.39695021603474,0.26175594198403,1.42576470620972,0,0,0.299033092087958,0.330916980914195,1.55560950675238,1.6790777052105,3.37912250981556,1.29092962510329,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.538283139656854,0.335769232728157,0.19318959403219,33.5951631057616,39.1944475931947,5.57357785605571,0,452.930977778887,508.199061103923,462.899574859032,481.188910562325,411.734594382156,336.905678235806,346.286542618916,391.329125601848,523.83262478574,381.071589449339,3.21740777510948,5.1873233542134,3.58540572083682,7.05009479498053,3.5634237646757,4.22840069435032,4.66718128383392,5.76898160268904,8.98573786857083,6.31743029409494,5.57654459758527,6.97917463128482,6.9294715527713,6.91471645972588,7.00712721258482,7.1444053692461,7.18482820858104,3.8581844092741,2.47251540481984,6.62395140604788,6.85738504770831,7.63145966485151,7.62995807831427,7.41266724824875,7.34053167239579,7.36147088657586,6.0366231048015,8.41823076601097,7.87663860305998,3.92799590160417,5.57584585183618,5.91026894253381,3.6830793885272,4.33823155320705,6.17301155139652,9.74261253957989,6.78401664491684,7.73535794573874,3.82576664137687,1.76473135295612,2.55054619182464
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0.140788722151667,0,2.56826952338257,0.0797721589953364,0,0,0,0,0,0,0,0,59.0200433648424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,0,4.14247797122848,5.27246838562732,8.55491555926847,3.63964696225943,1.43752564364972,0,0.725362142011344,0,0.514518872071894,0.286533439938757,0,9.5088736604011,15.869729378161,7.60597684207415,0,1.77858959222228,0,0,0,5.69240209984969,4.99483796918021,1.45165457231869,1.75507719831198,0.420649922702764,12.5686433137674,15.9025349485162,4.16468717330844,5.17565543498476,5.51531271966013,59.4625757396699,72.6540953704718,60.6745806362162,5.93488294785872,10.6125666578795,4.68822033501084,46.902743832232,59.0900740533264,56.8409481729734,14.7314292736834,18.5083185038834,5.96478226640962,3.86203585999239,6.65029728939713,0,0,0,0,0,0,12.4995533917259,0.852151612890289,0.259786004602869,1.06001872353102,3.66192891419369,2.56652954828636,0,7.11066703153331,0,0.760079596425296,0,6.62266502370548,0.258937883647172,0.742210695324124,1.04091196059682,0.304465478312141,0.691846491768175,2.11011696773672,2.23418543557839,1.0053327306374,0,0.144599356919912,0,0.808834249737046,0,0,1.86391761218122,194.113668418656,171.955746293847,0.766371165625774,0,0,0,69.5028566838377,378.810499133823,38.4502317465365,418.568963023002,450.826351273373,102.231717923304,221.946047876692,2.54598409625791,0.124406970610093,0,3.15662783829711,1.56144531555244,1.60931473103431,2.52086981727489,2.71268672104287,2.17716797284249,1.5373646434182,1.3118241438362,9.05461797586555,3.01795190105979,3.02569728268511,4.22282697993477,2.41115305670332,6.39508673218875,4.52727816478817,9.26019613835746,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,242.254020745875,25.5203438700625,0.330418782983798,1.58670339998127,0.426576501070468,0.928946687441754,0.515469845288373,0.403367049246685,0.667134131534611,1.33157938278791,0.474529061544512,1.31759163779209,4.52403375840485,3.97912944082302,2.72949721966768,1.79763881730844,2.37751854862164,1.59313018603494,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.275936746304732,95.3670504527484,90.4874220491809,2.45902418065013,0,1.89304931649754,1.95219372148319,2.80050417052639,0.477937595905104,0.891194696329576,0.283076530788832,1.21443210502468,0.584511715822624,0,330.318313281618,9.22610553853746,1.06839362200353,2.44330439030364,13.3625799607754,0,0.242780636154981,1.209294227859,0.188605079755898,0,0.307435147943927,0.516856586336442,0,1.78248689192361,2.21225730555071,0,0,48.6828636227917,0.720244376125241,0.388076051348264,2.57204442037911,13.1231772895282,11.0588666913284,11.8475294833527,16.745572201303,0.23467170806371,0,0,0.8244312647074,29.8709189387425,10.4944489374991,2.74556391207214,0.492422699235184,2.33184669303881,96.7920076494861,0,0.412773735926445,0.185194527369712,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,1.09181281873089,1.75323650300267,2.39695021603474,0.26175594198403,1.42576470620972,0,0,0.299033092087958,0.330916980914195,1.55560950675238,1.6790777052105,3.37912250981556,1.29092962510329,0.39061315453185,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.538283139656854,0.335769232728157,0.19318959403219,33.5951631057616,39.1944475931947,5.57357785605571,0,452.930977778887,508.199061103923,462.899574859032,481.188910562325,411.734594382156,336.905678235806,346.286542618916,391.329125601848,523.83262478574,381.071589449339,3.21740777510948,5.1873233542134,3.58540572083682,7.05009479498053,3.5634237646757,4.22840069435032,4.66718128383392,5.76898160268904,8.98573786857083,6.31743029409494,5.57654459758527,6.97917463128482,6.9294715527713,6.91471645972588,7.00712721258482,7.1444053692461,7.18482820858104,3.8581844092741,2.47251540481984,6.62395140604788,6.85738504770831,7.63145966485151,7.62995807831427,7.41266724824875,7.34053167239579,7.36147088657586,6.0366231048015,8.41823076601097,7.87663860305998,3.92799590160417,5.57584585183618,5.91026894253381,3.6830793885272,4.33823155320705,6.17301155139652,9.74261253957989,6.78401664491684,7.73535794573874,3.82576664137687,1.76473135295612,2.55054619182464
|short_description=p2@Dclk1
|short_description=p2@Dclk1
}}
}}

Latest revision as of 14:33, 25 September 2015

Short description:p2@Dclk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dclk1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 109bp_to_ENSMUST00000070418, NM_001111051, NM_001111052, NM_001195539, NM_001195540, uc008pgn.2, uc008pgo.2, uc008pgp.2, uc008pgq.2, uc008pgr.2, uc012cpq.1, uc012cpr.1_5end
EntrezGene:Dclk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dclk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A359.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.18
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D359.46
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F372.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D760.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E446.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E559.09
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F96.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2194.11
cerebellum, neonate N30.CNhs11135.1395-42I2171.96
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A469.50
corpus striatum, adult.CNhs10487.19-21D8378.81
corpus striatum, neonate N00.CNhs11226.630-43F138.45
cortex, adult.CNhs10473.12-14D5418.57
cortex, neonate N30.CNhs11107.1392-42F2450.83
diencephalon, adult.CNhs10482.20-12F2102.23
diencephalon, neonate N30.CNhs11201.1388-42B2221.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8242.25
hippocampus, neonate N00.CNhs11228.627-43G125.52
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C295.37
medulla oblongata, neonate N30.CNhs11200.1396-42A390.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9330.32
ovary, adult.CNhs10507.91-2I79.23
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G613.36
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G848.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B913.12
pituitary gland, embryo E16.CNhs11036.449-43F611.06
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E916.75
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G429.87
skin, neonate N03.CNhs11215.662-22H310.49
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C996.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F533.60
uterus, adult.CNhs10509.92-27E539.19
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1452.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2508.20
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3462.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7481.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4411.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5336.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6346.29
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7391.33
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8523.83
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9381.07
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.34
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.39e-0923
neuroblast (sensu Vertebrata)1.39e-0923
ectodermal cell1.18e-0844
neurectodermal cell1.18e-0844
neural cell1.81e-0843
neuron7.51e-0733
neuronal stem cell7.51e-0733
neuroblast7.51e-0733
electrically signaling cell7.51e-0733

Uber anatomy
Ontology termp-valuen
nervous system5.86e-2775
central nervous system2.95e-2673
regional part of nervous system5.66e-2654
neurectoderm3.14e-2564
neural plate3.14e-2564
presumptive neural plate3.14e-2564
ectoderm-derived structure3.34e-2595
ectoderm3.34e-2595
presumptive ectoderm3.34e-2595
neural tube1.63e-2452
neural rod1.63e-2452
future spinal cord1.63e-2452
neural keel1.63e-2452
ecto-epithelium3.96e-2473
brain1.10e-2147
future brain1.10e-2147
regional part of brain6.70e-2146
pre-chordal neural plate4.83e-1949
anterior neural tube1.20e-1840
gray matter4.82e-1834
regional part of forebrain6.01e-1839
forebrain6.01e-1839
future forebrain6.01e-1839
brain grey matter2.23e-1529
regional part of telencephalon2.23e-1529
telencephalon2.23e-1529
structure with developmental contribution from neural crest3.18e-1392
regional part of cerebral cortex1.00e-1117
cerebral cortex4.78e-1121
cerebral hemisphere4.78e-1121
pallium4.78e-1121
occipital lobe1.72e-0910
visual cortex1.72e-0910
neocortex1.72e-0910
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