FFCP PHASE1:Mm9::chr10:93498534..93498561,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215008 | |EntrezGene=215008 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z4E6,D3YVB1 | |UniProt=D3Z4E6,D3YVB1 | ||
|association_with_transcript=0bp_to_ENSMUST00000119818,ENSMUST00000123201_5end | |association_with_transcript=0bp_to_ENSMUST00000119818,ENSMUST00000123201_5end | ||
|cluster_id=chr10:93498534..93498561,- | |||
|description=CAGE_peak_2_at_Vezt_5end | |description=CAGE_peak_2_at_Vezt_5end | ||
|id=chr10:93498534..93498561,- | |id=chr10:93498534..93498561,- | ||
|ontology_enrichment_celltype=CL:0000117!1.48e-13!23;CL:0000337!1.48e-13!23;CL:0000540!2.19e-09!33;CL:0000047!2.19e-09!33;CL:0000031!2.19e-09!33;CL:0000404!2.19e-09!33;CL:0000393!5.98e-07!39;CL:0000211!5.98e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.48e-13!23;CL:0000337!1.48e-13!23;CL:0000540!2.19e-09!33;CL:0000047!2.19e-09!33;CL:0000031!2.19e-09!33;CL:0000404!2.19e-09!33;CL:0000393!5.98e-07!39;CL:0000211!5.98e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.47e-13,23;CL:0000337,1.47e-13,23;CL:0000540,2.19e-09,33;CL:0000047,2.19e-09,33;CL:0000031,2.19e-09,33;CL:0000404,2.19e-09,33;CL:0000393,5.97e-07,39;CL:0000211,5.97e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.82e-19!63;UBERON:0001049!1.03e-16!52;UBERON:0005068!1.03e-16!52;UBERON:0006241!1.03e-16!52;UBERON:0007135!1.03e-16!52;UBERON:0000955!3.26e-16!50;UBERON:0006238!3.26e-16!50;UBERON:0001017!3.90e-16!73;UBERON:0005743!3.90e-16!73;UBERON:0002616!1.20e-15!49;UBERON:0000073!1.51e-15!75;UBERON:0001016!1.51e-15!75;UBERON:0003056!2.29e-15!49;UBERON:0002020!8.53e-15!34;UBERON:0002346!1.53e-14!71;UBERON:0003075!1.53e-14!71;UBERON:0007284!1.53e-14!71;UBERON:0004121!3.19e-14!102;UBERON:0000924!3.19e-14!102;UBERON:0006601!3.19e-14!102;UBERON:0003080!1.66e-12!40;UBERON:0002791!1.67e-12!29;UBERON:0003528!1.67e-12!29;UBERON:0001893!1.67e-12!29;UBERON:0002780!5.97e-12!39;UBERON:0001890!5.97e-12!39;UBERON:0006240!5.97e-12!39;UBERON:0000956!2.72e-08!21;UBERON:0001869!2.72e-08!21;UBERON:0000203!2.72e-08!21;UBERON:0004111!3.88e-08!122;UBERON:0000025!7.26e-08!114 | |ontology_enrichment_uberon=UBERON:0000033!2.82e-19!63;UBERON:0001049!1.03e-16!52;UBERON:0005068!1.03e-16!52;UBERON:0006241!1.03e-16!52;UBERON:0007135!1.03e-16!52;UBERON:0000955!3.26e-16!50;UBERON:0006238!3.26e-16!50;UBERON:0001017!3.90e-16!73;UBERON:0005743!3.90e-16!73;UBERON:0002616!1.20e-15!49;UBERON:0000073!1.51e-15!75;UBERON:0001016!1.51e-15!75;UBERON:0003056!2.29e-15!49;UBERON:0002020!8.53e-15!34;UBERON:0002346!1.53e-14!71;UBERON:0003075!1.53e-14!71;UBERON:0007284!1.53e-14!71;UBERON:0004121!3.19e-14!102;UBERON:0000924!3.19e-14!102;UBERON:0006601!3.19e-14!102;UBERON:0003080!1.66e-12!40;UBERON:0002791!1.67e-12!29;UBERON:0003528!1.67e-12!29;UBERON:0001893!1.67e-12!29;UBERON:0002780!5.97e-12!39;UBERON:0001890!5.97e-12!39;UBERON:0006240!5.97e-12!39;UBERON:0000956!2.72e-08!21;UBERON:0001869!2.72e-08!21;UBERON:0000203!2.72e-08!21;UBERON:0004111!3.88e-08!122;UBERON:0000025!7.26e-08!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.78e-19,64;UBERON:0003075,2.78e-19,64;UBERON:0007284,2.78e-19,64;UBERON:0000073,4.90e-18,54;UBERON:0004121,7.72e-18,95;UBERON:0000924,7.72e-18,95;UBERON:0006601,7.72e-18,95;UBERON:0010371,5.83e-17,73;UBERON:0001049,1.02e-16,52;UBERON:0005068,1.02e-16,52;UBERON:0006241,1.02e-16,52;UBERON:0007135,1.02e-16,52;UBERON:0001017,4.11e-16,73;UBERON:0001016,1.59e-15,75;UBERON:0003056,2.28e-15,49;UBERON:0002020,8.50e-15,34;UBERON:0000955,1.31e-14,47;UBERON:0006238,1.31e-14,47;UBERON:0002616,4.67e-14,46;UBERON:0003080,1.65e-12,40;UBERON:0003528,1.67e-12,29;UBERON:0002791,1.67e-12,29;UBERON:0001893,1.67e-12,29;UBERON:0010314,5.16e-12,92;UBERON:0002780,5.95e-12,39;UBERON:0001890,5.95e-12,39;UBERON:0006240,5.95e-12,39;UBERON:0000956,2.71e-08,21;UBERON:0001869,2.71e-08,21;UBERON:0000203,2.71e-08,21;UBERON:0004111,3.74e-08,122;UBERON:0000025,7.00e-08,114 | |||
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| ||
|short_description=p2@Vezt | |short_description=p2@Vezt | ||
}} | }} |
Latest revision as of 14:36, 26 September 2015
Short description: | p2@Vezt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vezt_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000119818, ENSMUST00000123201_5end |
EntrezGene: | Vezt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.47e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.47e-13 | 23 |
neuron | 2.19e-09 | 33 |
neuronal stem cell | 2.19e-09 | 33 |
neuroblast | 2.19e-09 | 33 |
electrically signaling cell | 2.19e-09 | 33 |
electrically responsive cell | 5.97e-07 | 39 |
electrically active cell | 5.97e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.78e-19 | 64 |
neural plate | 2.78e-19 | 64 |
presumptive neural plate | 2.78e-19 | 64 |
regional part of nervous system | 4.90e-18 | 54 |
ectoderm-derived structure | 7.72e-18 | 95 |
ectoderm | 7.72e-18 | 95 |
presumptive ectoderm | 7.72e-18 | 95 |
ecto-epithelium | 5.83e-17 | 73 |
neural tube | 1.02e-16 | 52 |
neural rod | 1.02e-16 | 52 |
future spinal cord | 1.02e-16 | 52 |
neural keel | 1.02e-16 | 52 |
central nervous system | 4.11e-16 | 73 |
nervous system | 1.59e-15 | 75 |
pre-chordal neural plate | 2.28e-15 | 49 |
gray matter | 8.50e-15 | 34 |
brain | 1.31e-14 | 47 |
future brain | 1.31e-14 | 47 |
regional part of brain | 4.67e-14 | 46 |
anterior neural tube | 1.65e-12 | 40 |
brain grey matter | 1.67e-12 | 29 |
regional part of telencephalon | 1.67e-12 | 29 |
telencephalon | 1.67e-12 | 29 |
structure with developmental contribution from neural crest | 5.16e-12 | 92 |
regional part of forebrain | 5.95e-12 | 39 |
forebrain | 5.95e-12 | 39 |
future forebrain | 5.95e-12 | 39 |
cerebral cortex | 2.71e-08 | 21 |
cerebral hemisphere | 2.71e-08 | 21 |
pallium | 2.71e-08 | 21 |
anatomical conduit | 3.74e-08 | 122 |
tube | 7.00e-08 | 114 |