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FFCP PHASE1:Mm9::chr1:164500728..164500787,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53330
|EntrezGene=53330
|HGNC=
|HGNC=
|MCL_coexpression_id=2046
|TSSclassifier=NA
|UniProt=O70480
|UniProt=O70480
|association_with_transcript=7bp_to_ENSMUST00000135241_5end
|association_with_transcript=7bp_to_ENSMUST00000135241_5end
|cluster_id=chr1:164500728..164500787,+
|description=CAGE_peak_1_at_Vamp4_5end
|description=CAGE_peak_1_at_Vamp4_5end
|id=chr1:164500728..164500787,+
|id=chr1:164500728..164500787,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.67e-11,54;UBERON:0001049,2.09e-10,52;UBERON:0005068,2.09e-10,52;UBERON:0006241,2.09e-10,52;UBERON:0007135,2.09e-10,52;UBERON:0004121,4.05e-10,95;UBERON:0000924,4.05e-10,95;UBERON:0006601,4.05e-10,95;UBERON:0002020,5.75e-10,34;UBERON:0010371,6.27e-10,73;UBERON:0001016,1.79e-09,75;UBERON:0001017,2.32e-09,73;UBERON:0002346,3.13e-09,64;UBERON:0003075,3.13e-09,64;UBERON:0007284,3.13e-09,64;UBERON:0000955,1.91e-08,47;UBERON:0006238,1.91e-08,47;UBERON:0002616,5.07e-08,46;UBERON:0003528,6.46e-08,29;UBERON:0002791,6.46e-08,29;UBERON:0001893,6.46e-08,29;UBERON:0002021,1.36e-07,10;UBERON:0000411,1.36e-07,10;UBERON:0001950,1.36e-07,10;UBERON:0002619,3.34e-07,17;UBERON:0003080,3.56e-07,40;UBERON:0003056,4.79e-07,49;UBERON:0002780,9.11e-07,39;UBERON:0001890,9.11e-07,39;UBERON:0006240,9.11e-07,39
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9767,12.0965981720417,10.6635030967379,10.6997656235627,7.95699643670442,9.6704543198643,9.42321391142507,15.9426417148905,13.6694648879124,91.3182560668388,10.7651913151665,14.0639716888533,14.5838391258036,16.6616172286273,16.8956125490778,17.6035857968631,12.8902340995511,12.2685432978082,44.4514782319851,51.8454011264158,17.3806116345498,11.5553372715394,12.3253148597793,11.433032422046,14.3221356533985,14.9011016085949,15.505212988076,18.6088804239967,18.476860340511,17.451358723995,13.2082302529261,16.6652976064977,22.0325117356354,17.88216603378,27.2076460338254,8.21348027484039,6.72853924571068,7.21903850365537,13.1368923941889,9.3841237725591,15.0184331899157,12.0046292284277,11.034586288778,53.6514250486213,44.191222704689,49.8419096692275,49.493716514982,55.491684101422,61.1869056885657,56.0268675192399,55.8398291998033,65.2525068937255,58.5069152279557,11.5203955818436,13.167820822234,8.53668028770671,8.99494853152688,11.1094976192831,14.8913241844511,12.0013233012872,10.9198580336614,13.7995260124481,9.09709962349671,13.1809235942925,12.449338531481,12.4543204934944,15.3660365771686,14.1291253630809,17.6228665774737,14.4855407431069,13.3107362119956,11.9504911232959,12.953504971827,9.60033906679163,15.9728225543404,14.3061713968393,12.0637525804833,13.5517507798076,13.7921810863433,11.1586063452391,12.3642764375786,13.4446072707403,7.85599180320834,13.1684870117833,13.2981051207011,15.1415485972785,13.1696315008071,15.6254354894725,9.99242311751784,16.609144199624,12.8922632428979,13.390183244819,16.9855392722027,14.839541479707
|phase1_expression=15.2141404749554,5.58360652222978,7.27998783023258,7.86406949397758,3.50627010962443,5.54001597309236,6.77476657727024,20.0141151334443,9.43284438416167,5.61754863172784,20.5461561870606,17.549874978974,21.0576897815383,21.6802597999114,8.66085380720723,9.31386229993199,6.99561878128147,23.1864691538305,25.5032846506674,23.3414308488917,29.9352381331766,15.6879702897399,24.5527801790599,11.3594620183319,9.40578052375397,8.03924749761028,6.8921919385452,9.48073423817912,13.3016393619462,7.30887376303799,5.76499327703792,2.54012269383853,3.07532393792285,0,9.82095507154334,8.47796691328311,8.37094360675713,63.61680787201,64.8508335954754,51.3053269094322,71.7642415397837,65.5723665560108,64.0873666001123,25.0534667771399,22.6070556619517,15.7850206859046,7.82391344348039,13.0815093828268,12.9614847813338,20.4151394027998,15.3985063787899,11.5002051491977,23.9929126662563,22.4862264023517,24.1987535382574,11.5766746216176,13.4670716771216,12.3761302146586,18.4107979382234,17.9856932952491,14.5781222806421,10.5041804941431,9.78224275722253,16.6481447697059,20.7661936139065,14.209602298922,12.8828047522914,10.373894243682,10.7837196800817,9.45041568321835,9.88527318351495,26.8511925339575,26.283356373242,13.8414603112898,12.6516021744072,16.5459381589804,53.9567816897005,52.7348706291825,51.6117951740978,11.8697658957174,17.6571152152651,10.939180781692,57.7908807932859,53.4624479530096,49.9650270230169,25.0434297652618,29.1861945638161,20.1311401491325,11.8132861599767,18.5906037862692,14.4932244350839,14.6272059086836,7.47968467078526,16.7307989407723,9.74664626171504,11.2006721774334,19.24088555805,17.3838929029619,15.5871602761721,13.7802434059033,16.0561498545416,17.9657068380045,30.5766287647975,7.11066703153331,7.14420435337007,7.34743609877786,6.0662933401774,12.6744106488157,24.081223179187,18.8521516612327,8.84775166507293,6.39377504455497,11.992005857315,12.5099791658677,9.40709657085639,12.3153259503082,5.93267922562497,13.8815382643115,8.84610551949874,14.7207833452142,13.2504911076236,8.727754556434,13.0474232852686,26.6430525280508,19.8974371472782,12.2619386500124,8.74650408893218,8.99854096490112,9.27612657633372,37.7472411300153,44.3775584734068,20.4816593943969,48.1493366932606,48.5859368927628,35.7395436642443,31.474805035145,15.0722258498468,14.8044295026011,19.7123751578266,14.3100462002802,9.36867189331467,12.1848115349741,15.6654052930654,13.8648432408858,14.6278473175355,16.3985561964608,17.0537138698706,11.6416516832557,4.74249584452253,11.3463648100692,12.8444320639683,12.2749610159442,13.3462679628287,17.7608604926305,20.1666493679785,11.1459189418356,9.83098462238529,14.411482798424,13.6398479709884,4.14251545071004,4.92504725960302,5.58192390529146,5.91861838963026,7.28027657465394,7.0962871928194,8.8362899005155,6.9751084363901,10.1585847859437,8.55711219550098,11.6558899496158,11.7549773841491,13.7427988179812,11.1970558798436,11.6759584321523,42.2682796613896,13.2746949969277,15.5296828002385,8.72686869989696,7.67837701926842,8.36052018697579,7.7320476793256,9.4791256572971,9.78463392917429,13.5060194539917,10.4396393539793,8.56434564564857,12.5667604400135,14.523822459004,13.2575579241002,8.08937467788799,15.7780776408527,16.7278669533668,4.74169752382704,6.96915926919346,5.63538678365402,8.14605311381257,9.30971938404604,8.76697748628982,9.80166325425988,11.8088118383682,13.9728867778824,11.7227305725711,10.6722945751374,6.67380422864376,5.50365186316968,4.94696647246678,6.6943840058206,6.99413763282009,7.89340140522401,7.76779571117189,7.13394997810156,8.51140380883053,20.1275489138296,11.9085103253921,12.1694692514679,9.59799736199025,11.8402292924462,7.71909634181387,16.9972934953276,8.14813070613084,8.47417877498535,6.28056817368196,8.44884893838608,10.2178817039508,12.6163129669587,9.75668239288994,10.2462843669024,11.2946991720875,14.5103839478313,16.7140581010053,15.7143333497965,18.0811323226889,43.729472342389,20.1245103012923,13.769399644533,6.62248191131358,37.0871862871799,41.2585136804555,16.5574294830442,13.8859009962405,7.57219726599016,10.5418460960092,12.7099804662351,9.08081432219698,9.58034298554295,15.5692091933858,10.5250782435473,7.01414058987149,8.30104333687699,39.8438432363041,14.6198287764517,12.4645922567079,16.2886959353576,12.2077890999676,9.2921596837974,3.64170954232472,6.34879469625977,9.05304382828311,6.79194353625777,10.4527950300935,8.26970538138308,8.36127577798263,9.9819265947722,14.5376908650475,17.9211634577498,9.28219889233682,24.5116516142727,7.38250485528372,5.17434735131018,10.7168517515796,11.8817956540323,14.6262430433698,19.7458824722545,8.22055362609418,17.3657063967146,11.4389318266463,10.8058915046931,19.7863503529776,19.3757312035087,15.1988570818953,14.0859365923701,17.3989353729765,8.45294426226567,42.2769688583962,11.7900907750518,9.08102219038179,7.40778109478847,5.65105371014073,6.83471138605126,10.5237959675,10.8786195196067,12.1757763521582,13.1289975114203,7.63736494412091,8.54107182669065,11.1825706919767,12.0965981720417,10.6635030967379,10.6997656235627,7.95699643670442,9.6704543198643,9.42321391142507,15.9426417148905,13.6694648879124,91.3182560668388,10.7651913151665,14.0639716888533,14.5838391258036,16.6616172286273,16.8956125490778,17.6035857968631,12.8902340995511,12.2685432978082,44.4514782319851,51.8454011264158,17.3806116345498,11.5553372715394,12.3253148597793,11.433032422046,14.3221356533985,14.9011016085949,15.505212988076,18.6088804239967,18.476860340511,17.451358723995,13.2082302529261,16.6652976064977,22.0325117356354,17.88216603378,27.2076460338254,8.21348027484039,6.72853924571068,7.21903850365537,13.1368923941889,9.3841237725591,15.0184331899157,12.0046292284277,11.034586288778,53.6514250486213,44.191222704689,49.8419096692275,49.493716514982,55.491684101422,61.1869056885657,56.0268675192399,55.8398291998033,65.2525068937255,58.5069152279557,11.5203955818436,13.167820822234,8.53668028770671,8.99494853152688,11.1094976192831,14.8913241844511,12.0013233012872,10.9198580336614,13.7995260124481,9.09709962349671,13.1809235942925,12.449338531481,12.4543204934944,15.3660365771686,14.1291253630809,17.6228665774737,14.4855407431069,13.3107362119956,11.9504911232959,12.953504971827,9.60033906679163,15.9728225543404,14.3061713968393,12.0637525804833,13.5517507798076,13.7921810863433,11.1586063452391,12.3642764375786,13.4446072707403,7.85599180320834,13.1684870117833,13.2981051207011,15.1415485972785,13.1696315008071,15.6254354894725,9.99242311751784,16.609144199624,12.8922632428979,13.390183244819,16.9855392722027,14.839541479707
|short_description=p1@Vamp4
|short_description=p1@Vamp4
}}
}}

Latest revision as of 16:16, 26 September 2015

Short description:p1@Vamp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vamp4_5end
Coexpression cluster:MCL_coexpression_mm9:2046
Association with transcript: 7bp_to_ENSMUST00000135241_5end
EntrezGene:Vamp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vamp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F117.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.06
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A623.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B913.30
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G863.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H164.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H351.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G971.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H265.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H464.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.96
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C320.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.99
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I922.49
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C318.41
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C812.88
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.28
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D353.96
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F352.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D751.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.87
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E457.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E553.46
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I649.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.04
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D911.81
Mouse Schwann, donor2.CNhs12573.11746-123F918.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.67
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D718.85
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I312.32
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H113.88
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F514.72
bone (os femoris), neonate N16.CNhs11225.1525-43A613.25
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B226.64
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H712.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.28
corpora quadrigemina, adult.CNhs10501.16-22A437.75
corpus striatum, adult.CNhs10487.19-21D844.38
corpus striatum, neonate N00.CNhs11226.630-43F120.48
cortex, adult.CNhs10473.12-14D548.15
cortex, neonate N30.CNhs11107.1392-42F248.59
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B231.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.80
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G414.31
eyeball, embryo E12.CNhs11016.345-16C69.37
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C915.67
eyeball, embryo E17.CNhs11023.1261-18D413.86
eyeball, neonate N00.CNhs11207.633-15C614.63
eyeball, neonate N01.CNhs11140.1532-43E716.40
eyeball, neonate N02.CNhs11205.1551-44G817.05
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H211.35
forelimb, embryo E13.CNhs10589.384-1E212.84
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C417.76
forelimb, embryo E18.CNhs11008.1520-43B520.17
gonad, embryo E13.CNhs11044.1564-45I611.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.64
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C67.10
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E310.16
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G111.66
heart, neonate N16.CNhs11209.782-15G111.75
heart, neonate N20.CNhs11127.821-26I613.74
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E842.27
hippocampus, neonate N00.CNhs11228.627-43G113.27
intestinal mucosa, adult.CNhs10506.860-29I315.53
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D87.73
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D39.78
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E98.56
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A513.26
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E315.78
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F86.97
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G78.77
kidney, neonate N10.CNhs11206.758-6D59.80
kidney, neonate N20.CNhs11113.832-19I111.81
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H111.72
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F86.67
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D76.69
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G47.77
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A39.60
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F88.47
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A610.22
lung, embryo E18.CNhs10583.1287-20I612.62
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E510.25
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E614.51
lung, neonate N20.CNhs11109.822-18A416.71
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.12
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C237.09
medulla oblongata, neonate N30.CNhs11200.1396-42A341.26
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I939.84
ovary, adult.CNhs10507.91-2I714.62
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I416.29
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B911.88
pituitary gland, embryo E16.CNhs11036.449-43F614.63
pituitary gland, embryo E17.CNhs11039.1265-44F519.75
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I717.37
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F810.81
skin, adult.CNhs10492.30-1C319.79
skin, neonate N00.CNhs11124.650-25G419.38
skin, neonate N03.CNhs11215.662-22H315.20
skin, neonate N06.CNhs11097.693-20I514.09
skin, neonate N10.CNhs11108.762-6C417.40
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C942.28
spleen, adult.CNhs10465.25-2G211.79
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F27.41
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.13
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D412.10
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B87.96
stomach, neonate N07.CNhs11210.718-18A99.67
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I115.94
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G591.32
testis, embryo E13.CNhs11031.389-23F510.77
testis, embryo E15.CNhs11034.443-27C514.06
testis, embryo E16.CNhs11033.470-26G514.58
testis, embryo E17.CNhs11029.486-18I516.66
testis, embryo E18.CNhs11027.503-18G516.90
testis, neonate N00.CNhs11189.1300-22B717.60
testis, neonate N07.CNhs11222.726-26I412.89
testis, neonate N10.CNhs11204.763-44D912.27
testis, neonate N20.CNhs11110.839-18H344.45
testis, neonate N30.CNhs11130.1391-42E251.85
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I212.33
thymus, embryo E16.CNhs11002.456-26C511.43
thymus, embryo E17.CNhs10581.478-18C114.32
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F815.51
thymus, neonate N03.CNhs11137.2104-43C718.61
thymus, neonate N06.CNhs11197.681-26C418.48
thymus, neonate N07.CNhs11211.713-19D317.45
thymus, neonate N10.CNhs11194.748-24E413.21
thymus, neonate N20.CNhs11186.820-7A216.67
thymus, neonate N25.CNhs11125.1362-25G722.03
thymus, neonate N30.CNhs11132.1393-42G217.88
tongue, adult.CNhs10499.32-1B427.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E413.14
uterus, adult pregnant day19.CNhs10497.590-15F59.38
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D512.00
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D749.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A455.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.84
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A865.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A958.51
whole body, embryo E11.CNhs11014.324-5I811.52
whole body, embryo E12.CNhs10587.857-27C913.17
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.17
whole body, embryo E17.5.CNhs10513.490-9F915.63
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C613.39
whole body, neonate N06.CNhs10515.692-21D116.99
whole body, neonate N10.CNhs10518.761-6B414.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.67e-1154
neural tube2.09e-1052
neural rod2.09e-1052
future spinal cord2.09e-1052
neural keel2.09e-1052
ectoderm-derived structure4.05e-1095
ectoderm4.05e-1095
presumptive ectoderm4.05e-1095
gray matter5.75e-1034
ecto-epithelium6.27e-1073
nervous system1.79e-0975
central nervous system2.32e-0973
neurectoderm3.13e-0964
neural plate3.13e-0964
presumptive neural plate3.13e-0964
brain1.91e-0847
future brain1.91e-0847
regional part of brain5.07e-0846
brain grey matter6.46e-0829
regional part of telencephalon6.46e-0829
telencephalon6.46e-0829
occipital lobe1.36e-0710
visual cortex1.36e-0710
neocortex1.36e-0710
regional part of cerebral cortex3.34e-0717
anterior neural tube3.56e-0740
pre-chordal neural plate4.79e-0749
regional part of forebrain9.11e-0739
forebrain9.11e-0739
future forebrain9.11e-0739
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