FFCP PHASE1:Mm9::chr3:36512340..36512351,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71492 | |EntrezGene=71492 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K2G4,D3YXR1 | |UniProt=Q8K2G4,D3YXR1 | ||
|association_with_transcript=-29bp_to_ENSMUST00000040148,ENSMUST00000129671,ENSMUST00000142333,NM_027810,uc008ozp.2,uc008ozq.2,uc008ozr.1_5end | |association_with_transcript=-29bp_to_ENSMUST00000040148,ENSMUST00000129671,ENSMUST00000142333,NM_027810,uc008ozp.2,uc008ozq.2,uc008ozr.1_5end | ||
|cluster_id=chr3:36512340..36512351,- | |||
|description=CAGE_peak_6_at_Bbs7_5end | |description=CAGE_peak_6_at_Bbs7_5end | ||
|id=chr3:36512340..36512351,- | |id=chr3:36512340..36512351,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,3.41e-17,3;CL:0000737,3.41e-17,3;CL:0000746,3.41e-17,3;CL:0000513,3.41e-17,3;CL:0000680,4.19e-09,6;CL:0000187,4.19e-09,6;CL:0000056,4.19e-09,6;CL:0000222,6.16e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.83e-09,14;UBERON:0003135,2.43e-08,15;UBERON:0003101,7.36e-08,16;UBERON:0000079,7.36e-08,16;UBERON:0004176,1.96e-07,17;UBERON:0009196,1.96e-07,17;UBERON:0009117,1.96e-07,17;UBERON:0000991,4.71e-07,18;UBERON:0005564,4.71e-07,18 | |||
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| ||
|short_description=p6@Bbs7 | |short_description=p6@Bbs7 | ||
}} | }} |
Latest revision as of 23:37, 1 October 2015
Short description: | p6@Bbs7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bbs7_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -29bp_to_ENSMUST00000040148, ENSMUST00000129671, ENSMUST00000142333, NM_027810, uc008ozp.2, uc008ozq.2, uc008ozr.1_5end |
EntrezGene: | Bbs7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 3.41e-17 | 3 |
striated muscle cell | 3.41e-17 | 3 |
cardiac muscle cell | 3.41e-17 | 3 |
cardiac muscle myoblast | 3.41e-17 | 3 |
muscle precursor cell | 4.19e-09 | 6 |
muscle cell | 4.19e-09 | 6 |
myoblast | 4.19e-09 | 6 |
mesodermal cell | 6.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.83e-09 | 14 |
male reproductive organ | 2.43e-08 | 15 |
male organism | 7.36e-08 | 16 |
male reproductive system | 7.36e-08 | 16 |
external genitalia | 1.96e-07 | 17 |
indifferent external genitalia | 1.96e-07 | 17 |
indifferent gonad | 1.96e-07 | 17 |
gonad | 4.71e-07 | 18 |
gonad primordium | 4.71e-07 | 18 |