FFCP PHASE1:Mm9::chr1:156946760..156946763,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15939 | |EntrezGene=15939 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2291 | |||
|TSSclassifier=NA | |||
|UniProt=O89113,Q3UJ54 | |UniProt=O89113,Q3UJ54 | ||
|association_with_transcript=2bp_to_ENSMUST00000055322,NM_010500,uc007dax.2_5end | |association_with_transcript=2bp_to_ENSMUST00000055322,NM_010500,uc007dax.2_5end | ||
|cluster_id=chr1:156946760..156946763,- | |||
|description=CAGE_peak_1_at_Ier5_5end | |description=CAGE_peak_1_at_Ier5_5end | ||
|id=chr1:156946760..156946763,- | |id=chr1:156946760..156946763,- | ||
|ontology_enrichment_celltype=CL:0000063!7.80e-17!66;CL:0000219!2.91e-12!54;CL:0000144!6.69e-12!121;CL:0000012!6.69e-12!121;CL:0000988!7.73e-12!32;CL:0002032!7.73e-12!32;CL:0000037!7.73e-12!32;CL:0000566!7.73e-12!32;CL:0000837!7.73e-12!32;CL:0002320!6.86e-11!46;CL:0000134!6.86e-11!46;CL:0002371!1.72e-10!118;CL:0002031!2.41e-09!25;CL:0000548!2.42e-09!115;CL:0000004!2.42e-09!115;CL:0000255!2.42e-09!115;CL:0000738!2.56e-08!17;CL:0002087!2.56e-08!17;CL:0000838!2.18e-07!12;CL:0000542!6.06e-07!13;CL:0000051!6.06e-07!13;CL:0000084!9.59e-07!11;CL:0000827!9.59e-07!11 | |ontology_enrichment_celltype=CL:0000063!7.80e-17!66;CL:0000219!2.91e-12!54;CL:0000144!6.69e-12!121;CL:0000012!6.69e-12!121;CL:0000988!7.73e-12!32;CL:0002032!7.73e-12!32;CL:0000037!7.73e-12!32;CL:0000566!7.73e-12!32;CL:0000837!7.73e-12!32;CL:0002320!6.86e-11!46;CL:0000134!6.86e-11!46;CL:0002371!1.72e-10!118;CL:0002031!2.41e-09!25;CL:0000548!2.42e-09!115;CL:0000004!2.42e-09!115;CL:0000255!2.42e-09!115;CL:0000738!2.56e-08!17;CL:0002087!2.56e-08!17;CL:0000838!2.18e-07!12;CL:0000542!6.06e-07!13;CL:0000051!6.06e-07!13;CL:0000084!9.59e-07!11;CL:0000827!9.59e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.91e-12,54;CL:0000988,7.73e-12,32;CL:0002032,7.73e-12,32;CL:0000037,7.73e-12,32;CL:0000837,7.73e-12,32;CL:0002320,6.86e-11,46;CL:0000134,6.86e-11,46;CL:0002031,2.41e-09,25;CL:0000738,2.56e-08,17;CL:0002087,2.56e-08,17;CL:0000838,2.18e-07,12;CL:0000542,6.06e-07,13;CL:0000051,6.06e-07,13;CL:0000084,9.59e-07,11;CL:0000827,9.59e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.86e-11!46;UBERON:0000064!1.97e-07!99;UBERON:0000344!7.85e-07!15;UBERON:0002371!9.24e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.86e-11,46;UBERON:0000344,7.85e-07,15;UBERON:0002371,9.24e-07,16 | |||
|phase1_expression=18.7374151112609,226.834014965585,220.219631864535,105.257545534777,153.274093363582,99.7202875156625,68.2148910538935,137.903709435603,279.043247304603,281.81368969168,67.459879480849,59.9088914054976,77.5539306588362,106.652890951177,19.9865857089398,20.8549525411521,20.2872944657163,103.944783485539,81.4459735618088,106.097412949508,14.2872727453797,29.2908306042612,23.5079810225042,35.9982951285165,49.7818139915759,188.922316193842,158.951176582699,148.459679320578,31.1638407908453,27.9753444033523,49.2241733654776,30.4814723260623,29.5231098040594,0,29.7517168343813,15.1273527276228,30.0128953705683,85.7989843010661,72.6641870407134,49.211231933537,394.11509698078,150.270006690858,96.6165602531996,15.6112054289716,24.3304634926835,26.4307323112821,34.4252191513137,23.5467168890882,22.8473630043851,15.1655321277941,19.5980990275508,27.3129872293446,154.863345391291,110.980407727736,91.7536071658927,13.3774906738692,17.7650732762029,28.8776371675368,25.0872411465901,23.2756030879694,16.4796164911607,50.8266798103698,29.3467282716676,61.6431306337758,41.5323872278129,61.8117700003107,42.8428158041319,59.9380556301625,85.5439301544941,83.4336698889848,79.9234853135252,7.14127461009509,10.8225585066291,26.9479758272899,20.8943126819755,21.1420320920305,2.20231761998777,8.04430229936683,5.9906547969935,13.0567424852892,20.767695097747,20.8365348222704,6.42120897703176,6.19038871034848,8.40390362772456,2.94628585473668,5.69486723196412,9.69277118291563,37.9388228599252,35.9720626108299,103.191757977797,12.0459342777394,66.6371907033596,2.15881276655127,2.59910566979068,0,10.8142203501449,17.724753548118,17.9252343175979,17.666978725517,40.562904895684,16.6824420638613,17.8363667794652,7.11066703153331,33.7726023977494,37.7506199557897,34.3756622610053,13.0169622879728,15.2773351351831,9.50029690014878,16.1341353892506,9.13396434936424,8.99400439298628,12.8114244469729,10.347806227942,11.3099932196708,13.3485282576562,3.61498392299779,11.4999371753484,11.3236794963186,14.575540218386,10.1823803158397,14.9113408974498,4.68449275218475,12.1479089951804,29.8884754594052,101.123965082997,98.9839506139123,73.3195210211583,6.14141621559773,16.0125210986519,19.8533876338326,31.6360262749943,26.338692105024,8.93488591606108,12.3303359931496,29.635254880442,14.4312085907708,2.0217820674694,10.9429765060966,15.0939713836736,17.4725599369439,16.9258402017028,21.701493768343,24.493139694478,21.7793324484245,31.2963760029494,6.20888089773638,13.5807835547691,12.1027891307404,14.4279921814438,15.3437012699302,15.5706459566335,17.4126083261083,25.516984914585,20.8985980159418,41.4305780514809,41.9477088596986,40.9195439129653,14.0845525324141,16.4168241986767,14.9451511012642,9.94327889457883,13.9702604540657,13.7297730469767,14.4171045745253,20.1205051049714,21.8351190226607,15.1395061920402,19.043425833175,18.4026197669093,22.0761981012252,12.0752563410078,17.7152472763691,14.5100064509248,40.0298942155416,39.9806727410396,19.5693419331023,15.5700422890721,11.8440702648824,9.92279452180119,7.66397393568702,8.45036566610507,9.89173255785308,23.7264530772256,15.9757986082291,20.1068167040216,16.3144307073744,22.6158341058179,30.5598598942435,27.2333942842115,34.4514402730055,20.1047975010267,15.4235492023134,13.5249282807697,16.6994088833158,16.2920089220806,16.7624609537861,14.8605862242005,9.29943932271494,8.47793130343424,13.4502908674763,5.03969466048153,6.34011401721157,7.46924181430171,9.89393294493356,6.28866376304359,12.7823894668781,13.2405442926338,10.3570609482292,6.97181475132652,8.78596522201861,7.18841032636773,11.1642284300551,8.42501717409313,8.5876818502018,5.38192240565737,3.37710464954357,21.0618636789929,19.138632588819,18.578007314391,20.0299201214722,12.9079636558676,13.5680068527871,21.4239276797412,35.7094575579772,21.438379598442,25.0255099303116,32.3693180374699,30.9701664812745,37.1272711011676,39.9231401684972,25.6345182696763,42.9685490216781,27.538799289066,20.4193192265502,6.26147300952389,6.68106613575558,41.1476712895455,8.83648245215305,11.042787679569,8.98009111882268,8.18608911384636,13.860190281248,8.24355094104858,11.0399847007645,16.1924280669958,13.151513606009,10.2774822266096,18.315315036043,7.94864477166304,25.107250117083,22.1526264720863,14.5173708215831,7.96470830039777,8.74010290157933,12.3952658355548,7.73280826999182,8.85905678642318,9.53048958626175,14.7304127105886,11.2695456138027,10.3384239731569,6.0046984007805,7.37930260024991,6.18813259489121,9.87274856685985,20.5269647195694,22.5084109781993,21.005029433096,12.945837055886,17.658512942605,11.5184314421485,12.178597964584,38.4861601224485,12.2862601101016,2.8668691747145,11.7069239588451,15.339120536111,19.360448901938,29.9624583447873,33.4847435479925,31.188449519394,5.19190845629427,21.1879892189337,14.2406938894624,16.6675074632741,18.0833718724503,16.6766957819651,30.4274970364675,134.282959695146,149.888005438638,111.52737886017,8.59203556213602,11.704431762502,10.5726122905961,13.7166782843688,14.4270924249983,16.5955548447095,19.555330225799,17.6878395252219,20.4169634747543,36.5514224682856,12.4267862617385,4.50954350947352,19.1381178936293,20.6823113071372,12.6393272423631,17.4365761694937,16.2197880471147,18.6598009446749,15.4943217964301,8.49360689848258,8.21386010808421,11.5212002503146,7.2682557744481,17.6370937302443,11.5036272024607,7.9251702016455,12.1738153053887,9.93406773906325,17.1879492813555,15.0643317718069,15.3469003921184,15.165154524345,11.5950112907367,13.6441033035653,17.4143433368996,16.8302739141459,17.4582395383713,8.21348027484039,14.1747893442972,6.04384618910682,19.5121489972512,18.580565069667,12.6374620744413,44.5886228484457,3.00943262421218,16.942555278512,23.9369122983732,19.4784474569395,31.1054260042075,48.6408589037156,35.5035131773159,40.5013500139084,30.1715206160228,62.080510030836,53.8470724221893,15.9832515279632,7.58147259461959,12.6342868258059,10.6966955510049,10.4806581313991,15.0751676929012,7.77863547305653,10.0957178047058,10.2694147069381,10.3605856823157,6.59046179714623,9.05406438653166,9.73871677686777,11.0123262136375,9.82146519140987,10.4784612082276,11.3566639425958,10.4170979050401,14.0109206273124,10.5983222496766,8.57173130963539,10.4710725634009,11.4449371174714,9.88355633099834,8.75217237862575,9.13837765230106,10.6098224266208,7.3659519202596,10.7285249938231,14.5896990631012,11.8635018124174,12.3130602969454,12.2769312950907,9.91595783590182,11.7673032698496,13.989392364525,10.9947855969342,15.9004579995741,13.390183244819,13.0148937280514,9.04284558919644 | |phase1_expression=18.7374151112609,226.834014965585,220.219631864535,105.257545534777,153.274093363582,99.7202875156625,68.2148910538935,137.903709435603,279.043247304603,281.81368969168,67.459879480849,59.9088914054976,77.5539306588362,106.652890951177,19.9865857089398,20.8549525411521,20.2872944657163,103.944783485539,81.4459735618088,106.097412949508,14.2872727453797,29.2908306042612,23.5079810225042,35.9982951285165,49.7818139915759,188.922316193842,158.951176582699,148.459679320578,31.1638407908453,27.9753444033523,49.2241733654776,30.4814723260623,29.5231098040594,0,29.7517168343813,15.1273527276228,30.0128953705683,85.7989843010661,72.6641870407134,49.211231933537,394.11509698078,150.270006690858,96.6165602531996,15.6112054289716,24.3304634926835,26.4307323112821,34.4252191513137,23.5467168890882,22.8473630043851,15.1655321277941,19.5980990275508,27.3129872293446,154.863345391291,110.980407727736,91.7536071658927,13.3774906738692,17.7650732762029,28.8776371675368,25.0872411465901,23.2756030879694,16.4796164911607,50.8266798103698,29.3467282716676,61.6431306337758,41.5323872278129,61.8117700003107,42.8428158041319,59.9380556301625,85.5439301544941,83.4336698889848,79.9234853135252,7.14127461009509,10.8225585066291,26.9479758272899,20.8943126819755,21.1420320920305,2.20231761998777,8.04430229936683,5.9906547969935,13.0567424852892,20.767695097747,20.8365348222704,6.42120897703176,6.19038871034848,8.40390362772456,2.94628585473668,5.69486723196412,9.69277118291563,37.9388228599252,35.9720626108299,103.191757977797,12.0459342777394,66.6371907033596,2.15881276655127,2.59910566979068,0,10.8142203501449,17.724753548118,17.9252343175979,17.666978725517,40.562904895684,16.6824420638613,17.8363667794652,7.11066703153331,33.7726023977494,37.7506199557897,34.3756622610053,13.0169622879728,15.2773351351831,9.50029690014878,16.1341353892506,9.13396434936424,8.99400439298628,12.8114244469729,10.347806227942,11.3099932196708,13.3485282576562,3.61498392299779,11.4999371753484,11.3236794963186,14.575540218386,10.1823803158397,14.9113408974498,4.68449275218475,12.1479089951804,29.8884754594052,101.123965082997,98.9839506139123,73.3195210211583,6.14141621559773,16.0125210986519,19.8533876338326,31.6360262749943,26.338692105024,8.93488591606108,12.3303359931496,29.635254880442,14.4312085907708,2.0217820674694,10.9429765060966,15.0939713836736,17.4725599369439,16.9258402017028,21.701493768343,24.493139694478,21.7793324484245,31.2963760029494,6.20888089773638,13.5807835547691,12.1027891307404,14.4279921814438,15.3437012699302,15.5706459566335,17.4126083261083,25.516984914585,20.8985980159418,41.4305780514809,41.9477088596986,40.9195439129653,14.0845525324141,16.4168241986767,14.9451511012642,9.94327889457883,13.9702604540657,13.7297730469767,14.4171045745253,20.1205051049714,21.8351190226607,15.1395061920402,19.043425833175,18.4026197669093,22.0761981012252,12.0752563410078,17.7152472763691,14.5100064509248,40.0298942155416,39.9806727410396,19.5693419331023,15.5700422890721,11.8440702648824,9.92279452180119,7.66397393568702,8.45036566610507,9.89173255785308,23.7264530772256,15.9757986082291,20.1068167040216,16.3144307073744,22.6158341058179,30.5598598942435,27.2333942842115,34.4514402730055,20.1047975010267,15.4235492023134,13.5249282807697,16.6994088833158,16.2920089220806,16.7624609537861,14.8605862242005,9.29943932271494,8.47793130343424,13.4502908674763,5.03969466048153,6.34011401721157,7.46924181430171,9.89393294493356,6.28866376304359,12.7823894668781,13.2405442926338,10.3570609482292,6.97181475132652,8.78596522201861,7.18841032636773,11.1642284300551,8.42501717409313,8.5876818502018,5.38192240565737,3.37710464954357,21.0618636789929,19.138632588819,18.578007314391,20.0299201214722,12.9079636558676,13.5680068527871,21.4239276797412,35.7094575579772,21.438379598442,25.0255099303116,32.3693180374699,30.9701664812745,37.1272711011676,39.9231401684972,25.6345182696763,42.9685490216781,27.538799289066,20.4193192265502,6.26147300952389,6.68106613575558,41.1476712895455,8.83648245215305,11.042787679569,8.98009111882268,8.18608911384636,13.860190281248,8.24355094104858,11.0399847007645,16.1924280669958,13.151513606009,10.2774822266096,18.315315036043,7.94864477166304,25.107250117083,22.1526264720863,14.5173708215831,7.96470830039777,8.74010290157933,12.3952658355548,7.73280826999182,8.85905678642318,9.53048958626175,14.7304127105886,11.2695456138027,10.3384239731569,6.0046984007805,7.37930260024991,6.18813259489121,9.87274856685985,20.5269647195694,22.5084109781993,21.005029433096,12.945837055886,17.658512942605,11.5184314421485,12.178597964584,38.4861601224485,12.2862601101016,2.8668691747145,11.7069239588451,15.339120536111,19.360448901938,29.9624583447873,33.4847435479925,31.188449519394,5.19190845629427,21.1879892189337,14.2406938894624,16.6675074632741,18.0833718724503,16.6766957819651,30.4274970364675,134.282959695146,149.888005438638,111.52737886017,8.59203556213602,11.704431762502,10.5726122905961,13.7166782843688,14.4270924249983,16.5955548447095,19.555330225799,17.6878395252219,20.4169634747543,36.5514224682856,12.4267862617385,4.50954350947352,19.1381178936293,20.6823113071372,12.6393272423631,17.4365761694937,16.2197880471147,18.6598009446749,15.4943217964301,8.49360689848258,8.21386010808421,11.5212002503146,7.2682557744481,17.6370937302443,11.5036272024607,7.9251702016455,12.1738153053887,9.93406773906325,17.1879492813555,15.0643317718069,15.3469003921184,15.165154524345,11.5950112907367,13.6441033035653,17.4143433368996,16.8302739141459,17.4582395383713,8.21348027484039,14.1747893442972,6.04384618910682,19.5121489972512,18.580565069667,12.6374620744413,44.5886228484457,3.00943262421218,16.942555278512,23.9369122983732,19.4784474569395,31.1054260042075,48.6408589037156,35.5035131773159,40.5013500139084,30.1715206160228,62.080510030836,53.8470724221893,15.9832515279632,7.58147259461959,12.6342868258059,10.6966955510049,10.4806581313991,15.0751676929012,7.77863547305653,10.0957178047058,10.2694147069381,10.3605856823157,6.59046179714623,9.05406438653166,9.73871677686777,11.0123262136375,9.82146519140987,10.4784612082276,11.3566639425958,10.4170979050401,14.0109206273124,10.5983222496766,8.57173130963539,10.4710725634009,11.4449371174714,9.88355633099834,8.75217237862575,9.13837765230106,10.6098224266208,7.3659519202596,10.7285249938231,14.5896990631012,11.8635018124174,12.3130602969454,12.2769312950907,9.91595783590182,11.7673032698496,13.989392364525,10.9947855969342,15.9004579995741,13.390183244819,13.0148937280514,9.04284558919644 | ||
|short_description=p1@Ier5 | |short_description=p1@Ier5 | ||
}} | }} |
Latest revision as of 14:30, 26 September 2015
Short description: | p1@Ier5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ier5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2291 |
Association with transcript: | 2bp_to_ENSMUST00000055322, NM_010500, uc007dax.2_5end |
EntrezGene: | Ier5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.91e-12 | 54 |
hematopoietic cell | 7.73e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.73e-12 | 32 |
hematopoietic stem cell | 7.73e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.73e-12 | 32 |
connective tissue cell | 6.86e-11 | 46 |
mesenchymal cell | 6.86e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 2.41e-09 | 25 |
leukocyte | 2.56e-08 | 17 |
nongranular leukocyte | 2.56e-08 | 17 |
lymphoid lineage restricted progenitor cell | 2.18e-07 | 12 |
lymphocyte | 6.06e-07 | 13 |
common lymphoid progenitor | 6.06e-07 | 13 |
T cell | 9.59e-07 | 11 |
pro-T cell | 9.59e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.86e-11 | 46 |
mucosa | 7.85e-07 | 15 |
bone marrow | 9.24e-07 | 16 |