FFCP PHASE1:Hg19::chr12:78333998..78334003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89795 | |EntrezGene=89795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |HGNC=15998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000549369_5end | |association_with_transcript=-43bp_to_ENST00000549369_5end | ||
|cluster_id=chr12:78333998..78334003,+ | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_20_at_NAV3_5end | |description=CAGE_peak_20_at_NAV3_5end | ||
|id=chr12:78333998..78334003,+ | |id=chr12:78333998..78334003,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.96e-12!75;CL:0000055!1.57e-11!180;CL:0002552!3.74e-09!5;CL:0000548!1.78e-07!679;CL:0000004!1.78e-07!679;CL:0000255!1.78e-07!679;CL:0000012!2.54e-07!682 | |ontology_enrichment_celltype=CL:0000057!4.96e-12!75;CL:0000055!1.57e-11!180;CL:0002552!3.74e-09!5;CL:0000548!1.78e-07!679;CL:0000004!1.78e-07!679;CL:0000255!1.78e-07!679;CL:0000012!2.54e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000346;2.59e-12;3!CL:1000428;2.59e-12;3!CL:0002559;6.55e-08;5!CL:0002552;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.31e-12,3;CL:1000428,2.31e-12,3;CL:0002559,6.13e-08,5;CL:0002552,6.55e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;9.07e-18;2!DOID:1115;1.25e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.48e-18,2;DOID:1115,1.33e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0002100!9.76e-10!216;UBERON:0000914!8.54e-09!83;UBERON:0002329!8.54e-09!83;UBERON:0003077!8.54e-09!83;UBERON:0003059!8.54e-09!83;UBERON:0007282!8.54e-09!83;UBERON:0009618!8.54e-09!83;UBERON:0007285!8.54e-09!83;UBERON:0001828!6.12e-08!8;UBERON:0005256!1.22e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;2.59e-12;3!UBERON:0001992;2.59e-12;3!UBERON:0002073;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.31e-12,3;UBERON:0001992,2.31e-12,3;UBERON:0002073,6.13e-08,5;UBERON:0005086,6.13e-08,5 | |||
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| ||
|short_description=p20@NAV3 | |short_description=p20@NAV3 | ||
}} | }} |
Latest revision as of 22:32, 24 September 2015
Short description: | p20@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NAV3_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | -43bp_to_ENST00000549369_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.31e-12 | 3 |
stem cell of epidermis | 2.31e-12 | 3 |
hair follicle cell | 6.13e-08 | 5 |
fibroblast of gingiva | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.31e-12 | 3 |
papillary layer of dermis | 2.31e-12 | 3 |
hair follicle | 6.13e-08 | 5 |
hair follicle placode | 6.13e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.48e-18 | 2 |
sarcoma | 1.33e-07 | 20 |