FFCP PHASE1:Mm9::chr10:77441365..77441416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67884 | |EntrezGene=67884 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=347 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q2H4,Q3U699,Q8C6G1,Q9D127 | |UniProt=E9Q2H4,Q3U699,Q8C6G1,Q9D127 | ||
|association_with_transcript=0bp_to_ENSMUST00000020526,ENSMUST00000123999,ENSMUST00000149074,NM_026431,uc007fwn.1,uc011xhp.1_5end | |association_with_transcript=0bp_to_ENSMUST00000020526,ENSMUST00000123999,ENSMUST00000149074,NM_026431,uc007fwn.1,uc011xhp.1_5end | ||
|cluster_id=chr10:77441365..77441416,+ | |||
|description=CAGE_peak_1_at_1810043G02Rik_5end | |description=CAGE_peak_1_at_1810043G02Rik_5end | ||
|id=chr10:77441365..77441416,+ | |id=chr10:77441365..77441416,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-15!50;CL:0000221!3.47e-15!44;CL:0000133!3.47e-15!44;CL:0002319!9.09e-15!43;CL:0000393!6.90e-12!39;CL:0000211!6.90e-12!39;CL:0000540!2.26e-10!33;CL:0000047!2.26e-10!33;CL:0000031!2.26e-10!33;CL:0000404!2.26e-10!33;CL:0000117!3.00e-09!23;CL:0000337!3.00e-09!23;CL:0002321!1.23e-07!70;CL:0000220!1.23e-07!70 | |ontology_enrichment_celltype=CL:0000055!1.29e-15!50;CL:0000221!3.47e-15!44;CL:0000133!3.47e-15!44;CL:0002319!9.09e-15!43;CL:0000393!6.90e-12!39;CL:0000211!6.90e-12!39;CL:0000540!2.26e-10!33;CL:0000047!2.26e-10!33;CL:0000031!2.26e-10!33;CL:0000404!2.26e-10!33;CL:0000117!3.00e-09!23;CL:0000337!3.00e-09!23;CL:0002321!1.23e-07!70;CL:0000220!1.23e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.47e-15,44;CL:0000133,3.47e-15,44;CL:0002319,9.09e-15,43;CL:0000393,6.90e-12,39;CL:0000211,6.90e-12,39;CL:0000540,2.26e-10,33;CL:0000047,2.26e-10,33;CL:0000031,2.26e-10,33;CL:0000404,2.26e-10,33;CL:0000117,3.00e-09,23;CL:0000337,3.00e-09,23;CL:0002321,1.21e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0000073!6.63e-31!75;UBERON:0001016!6.63e-31!75;UBERON:0004121!1.04e-27!102;UBERON:0000924!1.04e-27!102;UBERON:0006601!1.04e-27!102;UBERON:0002346!1.76e-24!71;UBERON:0003075!1.76e-24!71;UBERON:0007284!1.76e-24!71;UBERON:0001049!1.89e-23!52;UBERON:0005068!1.89e-23!52;UBERON:0006241!1.89e-23!52;UBERON:0007135!1.89e-23!52;UBERON:0000955!4.48e-22!50;UBERON:0006238!4.48e-22!50;UBERON:0000033!9.66e-22!63;UBERON:0002616!1.01e-21!49;UBERON:0003056!1.33e-17!49;UBERON:0003080!6.61e-17!40;UBERON:0002780!2.47e-16!39;UBERON:0001890!2.47e-16!39;UBERON:0006240!2.47e-16!39;UBERON:0002020!5.24e-15!34;UBERON:0002791!2.32e-12!29;UBERON:0003528!2.32e-12!29;UBERON:0001893!2.32e-12!29;UBERON:0007811!4.05e-12!86;UBERON:0000153!1.71e-11!94;UBERON:0000956!8.22e-09!21;UBERON:0001869!8.22e-09!21;UBERON:0000203!8.22e-09!21;UBERON:0002619!1.44e-08!17;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.28e-31!73;UBERON:0005743!2.28e-31!73;UBERON:0000073!6.63e-31!75;UBERON:0001016!6.63e-31!75;UBERON:0004121!1.04e-27!102;UBERON:0000924!1.04e-27!102;UBERON:0006601!1.04e-27!102;UBERON:0002346!1.76e-24!71;UBERON:0003075!1.76e-24!71;UBERON:0007284!1.76e-24!71;UBERON:0001049!1.89e-23!52;UBERON:0005068!1.89e-23!52;UBERON:0006241!1.89e-23!52;UBERON:0007135!1.89e-23!52;UBERON:0000955!4.48e-22!50;UBERON:0006238!4.48e-22!50;UBERON:0000033!9.66e-22!63;UBERON:0002616!1.01e-21!49;UBERON:0003056!1.33e-17!49;UBERON:0003080!6.61e-17!40;UBERON:0002780!2.47e-16!39;UBERON:0001890!2.47e-16!39;UBERON:0006240!2.47e-16!39;UBERON:0002020!5.24e-15!34;UBERON:0002791!2.32e-12!29;UBERON:0003528!2.32e-12!29;UBERON:0001893!2.32e-12!29;UBERON:0007811!4.05e-12!86;UBERON:0000153!1.71e-11!94;UBERON:0000956!8.22e-09!21;UBERON:0001869!8.22e-09!21;UBERON:0000203!8.22e-09!21;UBERON:0002619!1.44e-08!17;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.28e-31,73;UBERON:0001016,6.62e-31,75;UBERON:0004121,4.19e-27,95;UBERON:0000924,4.19e-27,95;UBERON:0006601,4.19e-27,95;UBERON:0000073,1.17e-24,54;UBERON:0002346,2.22e-24,64;UBERON:0003075,2.22e-24,64;UBERON:0007284,2.22e-24,64;UBERON:0001049,1.89e-23,52;UBERON:0005068,1.89e-23,52;UBERON:0006241,1.89e-23,52;UBERON:0007135,1.89e-23,52;UBERON:0010371,4.12e-22,73;UBERON:0000955,2.60e-20,47;UBERON:0006238,2.60e-20,47;UBERON:0002616,5.75e-20,46;UBERON:0010314,3.79e-18,92;UBERON:0003056,1.33e-17,49;UBERON:0003080,6.61e-17,40;UBERON:0002780,2.47e-16,39;UBERON:0001890,2.47e-16,39;UBERON:0006240,2.47e-16,39;UBERON:0002020,5.24e-15,34;UBERON:0003528,2.32e-12,29;UBERON:0002791,2.32e-12,29;UBERON:0001893,2.32e-12,29;UBERON:0000956,8.21e-09,21;UBERON:0001869,8.21e-09,21;UBERON:0000203,8.21e-09,21;UBERON:0002619,1.44e-08,17;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12 | |||
|phase1_expression=28.5064947846533,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,5.20425742926858,3.73780224952841,8.26389270026088,0.84473233291,1.17032263160997,0.856089841127525,0.8774937489487,4.62241970814255,6.46910977900581,4.99664642723494,4.45445588257617,4.89693314689703,11.0411757875383,7.95263714913285,6.36584477697045,34.18740264073,13.5035693633204,9.92559198727954,2.71987118748791,5.50582274561208,0.57423196411502,0.86152399231815,2.15471232685889,2.66032787238923,2.01624103807945,2.43903561720835,20.3209815507082,23.9875267157982,0,4.91047753577167,7.64679368649065,5.3084032628216,16.7412652294763,10.1573594788094,9.94695113550217,13.5293242247133,18.442228093878,17.9638830621527,38.5244263005266,40.6521494190253,33.9561491499111,87.6278305669804,62.5732198811882,50.0884496634596,54.2459418417251,42.1359129092341,61.8136026769378,5.5368259999053,9.42970784614748,4.7053131879945,15.9500850342287,22.6361417551618,23.7209162447623,36.0123300330084,38.0873505075864,36.7622214033584,32.1902305465675,43.5754450094458,49.4944844504769,57.3542490288845,61.8117700003107,50.6324186776104,93.7492664984593,20.4268536247701,17.010748229793,17.2466468308133,56.2732439275493,51.9041071236292,21.9258530594768,18.8815577905926,21.1420320920305,51.7544640697127,44.5628809917305,43.1634358450044,29.6744147392936,30.373897676,25.0038417867245,55.2782338022734,64.1549375436115,50.4234217663473,43.3104020646292,39.8640706237488,40.2622802982649,10.5259408733126,25.0897579554528,15.6526823898906,9.46466264679525,6.11974200336975,14.5719861742211,9.74664626171504,12.5447528387254,16.5724415755467,32.2113309672529,36.8896126536074,47.7008425588959,37.464349660597,24.3820307087204,43.3168907501298,28.4426681261332,10.8245520505607,6.08063677140237,13.6491600153991,16.2141109201065,12.4290184150642,29.5399856739001,15.7871647357184,16.7456013071678,15.681853813412,16.7302131013411,16.9327738275415,24.7563184919461,9.39340877390621,21.9791022518266,7.96149496754887,11.0001457964238,10.1587098491781,11.1521308221101,13.0474232852686,31.034764483224,24.7147114039877,4.34276993854605,7.54835284387298,9.59844369589452,7.11593271609162,46.8844701337095,45.7500602818627,30.5340075634261,40.5010666048004,45.5173514047988,49.4535546051753,43.9673822913623,14.8685471221462,14.1823946495506,25.7777213602348,25.8843482740363,20.0385482162564,18.8519725635448,17.6460887209242,19.8930359543144,20.6150592428523,14.8611915530426,18.9277483610652,30.7857011179429,17.6765754204931,15.3175924935934,18.2989169130507,18.4124415239163,15.2925987074079,10.447564995665,12.7584924572925,15.325638545024,7.02213187313235,5.91900186363845,6.53576048609863,14.9130556225561,9.61556845922494,10.9837857491219,10.180023630164,10.8220327461072,12.0328348052155,9.99895962426754,11.8040296615832,13.1944836874902,11.3546296440302,9.52171291658752,12.4035278605159,14.0351987928319,11.1970558798436,14.091673969839,43.7403093013385,27.9900545671654,2.97376904685418,4.49565963328025,17.276348293354,18.3466970769746,12.1135413642768,9.68080918192044,9.33987784148455,8.94060442729028,4.2707615539006,5.59976446061637,10.0534083520108,7.56034593756373,8.96834800747953,6.29173586057955,4.97117514711797,6.57166201739412,18.7771221943551,15.6520462275328,22.5415471346161,14.255592949172,16.6799138964158,14.1674356178443,22.5122072162356,22.8795729368383,24.6488002710958,29.6153193412321,9.48648406678877,5.83957870006329,6.2898878436225,2.02375901146368,7.30296436998611,5.54707467430559,6.62027214631691,7.19240343627027,5.5125977103512,6.86403532970204,4.31304619582064,10.4199465347181,7.17686648163489,9.34541848404313,6.27890947326693,14.9557491622644,19.3990849674935,18.759649765278,12.711268162478,13.7493519477902,11.9692026627136,14.573044397438,16.4250112211349,11.3177515757523,14.029527825451,13.2878813789265,12.9158362612565,13.2729284919748,10.7064688756855,15.1881511510587,27.142431109069,40.2490206025845,21.6376280128376,22.0749397043786,43.6697604766794,40.2036085011257,23.6066321342413,11.3611917241968,16.0909191902291,21.4741309363151,20.2497993868831,20.0733790280144,19.8290819933331,20.9476632783736,25.5030742055183,19.8733983379692,20.9502522311657,30.2042037436499,20.2974321847824,22.4362660620742,17.7546785695398,22.2709666012923,10.619611067197,27.9197731578229,16.0231485191318,9.9960692270626,16.5369060013233,10.1453598821496,11.8877014857382,15.2684166380552,14.6163925137736,10.1131762539461,5.27093042874994,15.470331487228,46.9806655940227,20.5269647195694,36.349790142954,30.4358589744861,32.2759225228938,30.5010678099541,30.4415688113924,37.7536536902103,8.44818149029357,10.8034356140548,11.9085334949679,10.7176064411962,14.2088695492397,8.50412241486998,8.35606408021955,9.35603128546849,6.12109756922687,45.8000495965959,5.12612642393558,14.4470807574256,8.88933731374616,3.20226376907975,5.05768642567793,7.32090154260872,7.47905091972963,10.7762618289217,9.12119827109197,21.0027535963325,20.2455035891927,16.8755157715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|phase1_expression=28.5064947846533,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,5.20425742926858,3.73780224952841,8.26389270026088,0.84473233291,1.17032263160997,0.856089841127525,0.8774937489487,4.62241970814255,6.46910977900581,4.99664642723494,4.45445588257617,4.89693314689703,11.0411757875383,7.95263714913285,6.36584477697045,34.18740264073,13.5035693633204,9.92559198727954,2.71987118748791,5.50582274561208,0.57423196411502,0.86152399231815,2.15471232685889,2.66032787238923,2.01624103807945,2.43903561720835,20.3209815507082,23.9875267157982,0,4.91047753577167,7.64679368649065,5.3084032628216,16.7412652294763,10.1573594788094,9.94695113550217,13.5293242247133,18.442228093878,17.9638830621527,38.5244263005266,40.6521494190253,33.9561491499111,87.6278305669804,62.5732198811882,50.0884496634596,54.2459418417251,42.1359129092341,61.8136026769378,5.5368259999053,9.42970784614748,4.7053131879945,15.9500850342287,22.6361417551618,23.7209162447623,36.0123300330084,38.0873505075864,36.7622214033584,32.1902305465675,43.5754450094458,49.4944844504769,57.3542490288845,61.8117700003107,50.6324186776104,93.7492664984593,20.4268536247701,17.010748229793,17.2466468308133,56.2732439275493,51.9041071236292,21.9258530594768,18.8815577905926,21.1420320920305,51.7544640697127,44.5628809917305,43.1634358450044,29.6744147392936,30.373897676,25.0038417867245,55.2782338022734,64.1549375436115,50.4234217663473,43.3104020646292,39.8640706237488,40.2622802982649,10.5259408733126,25.0897579554528,15.6526823898906,9.46466264679525,6.11974200336975,14.5719861742211,9.74664626171504,12.5447528387254,16.5724415755467,32.2113309672529,36.8896126536074,47.7008425588959,37.464349660597,24.3820307087204,43.3168907501298,28.4426681261332,10.8245520505607,6.08063677140237,13.6491600153991,16.2141109201065,12.4290184150642,29.5399856739001,15.7871647357184,16.7456013071678,15.681853813412,16.7302131013411,16.9327738275415,24.7563184919461,9.39340877390621,21.9791022518266,7.96149496754887,11.0001457964238,10.1587098491781,11.1521308221101,13.0474232852686,31.034764483224,24.7147114039877,4.34276993854605,7.54835284387298,9.59844369589452,7.11593271609162,46.8844701337095,45.7500602818627,30.5340075634261,40.5010666048004,45.5173514047988,49.4535546051753,43.9673822913623,14.8685471221462,14.1823946495506,25.7777213602348,25.8843482740363,20.0385482162564,18.8519725635448,17.6460887209242,19.8930359543144,20.6150592428523,14.8611915530426,18.9277483610652,30.7857011179429,17.6765754204931,15.3175924935934,18.2989169130507,18.4124415239163,15.2925987074079,10.447564995665,12.7584924572925,15.325638545024,7.02213187313235,5.91900186363845,6.53576048609863,14.9130556225561,9.61556845922494,10.9837857491219,10.180023630164,10.8220327461072,12.0328348052155,9.99895962426754,11.8040296615832,13.1944836874902,11.3546296440302,9.52171291658752,12.4035278605159,14.0351987928319,11.1970558798436,14.091673969839,43.7403093013385,27.9900545671654,2.97376904685418,4.49565963328025,17.276348293354,18.3466970769746,12.1135413642768,9.68080918192044,9.33987784148455,8.94060442729028,4.2707615539006,5.59976446061637,10.0534083520108,7.56034593756373,8.96834800747953,6.29173586057955,4.97117514711797,6.57166201739412,18.7771221943551,15.6520462275328,22.5415471346161,14.255592949172,16.6799138964158,14.1674356178443,22.5122072162356,22.8795729368383,24.6488002710958,29.6153193412321,9.48648406678877,5.83957870006329,6.2898878436225,2.02375901146368,7.30296436998611,5.54707467430559,6.62027214631691,7.19240343627027,5.5125977103512,6.86403532970204,4.31304619582064,10.4199465347181,7.17686648163489,9.34541848404313,6.27890947326693,14.9557491622644,19.3990849674935,18.759649765278,12.711268162478,13.7493519477902,11.9692026627136,14.573044397438,16.4250112211349,11.3177515757523,14.029527825451,13.2878813789265,12.9158362612565,13.2729284919748,10.7064688756855,15.1881511510587,27.142431109069,40.2490206025845,21.6376280128376,22.0749397043786,43.6697604766794,40.2036085011257,23.6066321342413,11.3611917241968,16.0909191902291,21.4741309363151,20.2497993868831,20.0733790280144,19.8290819933331,20.9476632783736,25.5030742055183,19.8733983379692,20.9502522311657,30.2042037436499,20.2974321847824,22.4362660620742,17.7546785695398,22.2709666012923,10.619611067197,27.9197731578229,16.0231485191318,9.9960692270626,16.5369060013233,10.1453598821496,11.8877014857382,15.2684166380552,14.6163925137736,10.1131762539461,5.27093042874994,15.470331487228,46.9806655940227,20.5269647195694,36.349790142954,30.4358589744861,32.2759225228938,30.5010678099541,30.4415688113924,37.7536536902103,8.44818149029357,10.8034356140548,11.9085334949679,10.7176064411962,14.2088695492397,8.50412241486998,8.35606408021955,9.35603128546849,6.12109756922687,45.8000495965959,5.12612642393558,14.4470807574256,8.88933731374616,3.20226376907975,5.05768642567793,7.32090154260872,7.47905091972963,10.7762618289217,9.12119827109197,21.0027535963325,20.2455035891927,16.8755157715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| ||
|short_description=p1@1810043G02Rik | |short_description=p1@1810043G02Rik | ||
}} | }} |
Latest revision as of 08:21, 26 September 2015
Short description: | p1@1810043G02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1810043G02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:347 |
Association with transcript: | 0bp_to_ENSMUST00000020526, ENSMUST00000123999, ENSMUST00000149074, NM_026431, uc007fwn.1, uc011xhp.1_5end |
EntrezGene: | 1810043G02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.47e-15 | 44 |
neurectodermal cell | 3.47e-15 | 44 |
neural cell | 9.09e-15 | 43 |
electrically responsive cell | 6.90e-12 | 39 |
electrically active cell | 6.90e-12 | 39 |
neuron | 2.26e-10 | 33 |
neuronal stem cell | 2.26e-10 | 33 |
neuroblast | 2.26e-10 | 33 |
electrically signaling cell | 2.26e-10 | 33 |
CNS neuron (sensu Vertebrata) | 3.00e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.00e-09 | 23 |
embryonic cell | 1.21e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.28e-31 | 73 |
nervous system | 6.62e-31 | 75 |
ectoderm-derived structure | 4.19e-27 | 95 |
ectoderm | 4.19e-27 | 95 |
presumptive ectoderm | 4.19e-27 | 95 |
regional part of nervous system | 1.17e-24 | 54 |
neurectoderm | 2.22e-24 | 64 |
neural plate | 2.22e-24 | 64 |
presumptive neural plate | 2.22e-24 | 64 |
neural tube | 1.89e-23 | 52 |
neural rod | 1.89e-23 | 52 |
future spinal cord | 1.89e-23 | 52 |
neural keel | 1.89e-23 | 52 |
ecto-epithelium | 4.12e-22 | 73 |
brain | 2.60e-20 | 47 |
future brain | 2.60e-20 | 47 |
regional part of brain | 5.75e-20 | 46 |
structure with developmental contribution from neural crest | 3.79e-18 | 92 |
pre-chordal neural plate | 1.33e-17 | 49 |
anterior neural tube | 6.61e-17 | 40 |
regional part of forebrain | 2.47e-16 | 39 |
forebrain | 2.47e-16 | 39 |
future forebrain | 2.47e-16 | 39 |
gray matter | 5.24e-15 | 34 |
brain grey matter | 2.32e-12 | 29 |
regional part of telencephalon | 2.32e-12 | 29 |
telencephalon | 2.32e-12 | 29 |
cerebral cortex | 8.21e-09 | 21 |
cerebral hemisphere | 8.21e-09 | 21 |
pallium | 8.21e-09 | 21 |
regional part of cerebral cortex | 1.44e-08 | 17 |
posterior neural tube | 3.31e-07 | 12 |
chordal neural plate | 3.31e-07 | 12 |