FFCP PHASE1:Hg19::chr12:7653927..7653941,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:7653927..7653941,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr12:7653927..7653941,- | |description=CAGE_peak_at_chr12:7653927..7653941,- | ||
|id=chr12:7653927..7653941,- | |id=chr12:7653927..7653941,- | ||
|ontology_enrichment_celltype=CL:0002194!9.15e-12!63;CL:0000576!9.15e-12!63;CL:0000040!9.15e-12!63;CL:0000559!9.15e-12!63;CL:0002619!2.31e-11!3;CL:0002009!2.84e-11!65;CL:0000839!3.60e-10!70;CL:0000557!5.73e-10!71;CL:0000766!4.84e-09!76 | |ontology_enrichment_celltype=CL:0002194!9.15e-12!63;CL:0000576!9.15e-12!63;CL:0000040!9.15e-12!63;CL:0000559!9.15e-12!63;CL:0002619!2.31e-11!3;CL:0002009!2.84e-11!65;CL:0000839!3.60e-10!70;CL:0000557!5.73e-10!71;CL:0000766!4.84e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0002619;4.71e-75;3!CL:0000235;2.38e-17;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,4.72e-75,3;CL:0000235,2.19e-17,6;CL:0002194,1.28e-10,59;CL:0000576,1.28e-10,59;CL:0000040,1.28e-10,59;CL:0000559,1.28e-10,59;CL:0002009,2.77e-10,61;CL:0000839,1.57e-09,66;CL:0000557,2.15e-09,67;CL:0000766,9.18e-09,72;CL:0000115,6.26e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.66e-32!115;UBERON:0000062!7.51e-11!511;UBERON:0002405!7.82e-11!115;UBERON:0002771!1.48e-09!3;UBERON:0002390!2.45e-09!102;UBERON:0003061!2.45e-09!102;UBERON:0002298!4.47e-09!8;UBERON:0002193!4.57e-09!112;UBERON:0002371!2.19e-08!80;UBERON:0001049!3.65e-08!57;UBERON:0005068!3.65e-08!57;UBERON:0006241!3.65e-08!57;UBERON:0007135!3.65e-08!57;UBERON:0000200!4.30e-08!6;UBERON:0001474!1.60e-07!86;UBERON:0002950!2.36e-07!2;UBERON:0001891!2.36e-07!2;UBERON:0009616!2.36e-07!2;UBERON:0004177!3.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.61e-26;1!UBERON:0002106;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.61e-26,1;UBERON:0002405,5.96e-13,93;UBERON:0002193,3.60e-11,108;UBERON:0002106,1.81e-09,3;UBERON:0004854,1.81e-09,3;UBERON:0009034,1.81e-09,3;UBERON:0002095,1.81e-09,3;UBERON:0004782,1.81e-09,3;UBERON:0003281,1.81e-09,3;UBERON:0009664,1.81e-09,3;UBERON:0002296,1.81e-09,3;UBERON:0005602,1.81e-09,3;UBERON:0001179,1.81e-09,3;UBERON:0006293,1.81e-09,3;UBERON:0002390,4.06e-09,98;UBERON:0003061,4.06e-09,98;UBERON:0002371,2.57e-08,76;UBERON:0001474,9.98e-08,82;UBERON:0004765,4.64e-07,90 | |||
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| ||
|short_description=p@chr12:7653927..7653941,- | |short_description=p@chr12:7653927..7653941,- | ||
}} | }} |
Latest revision as of 12:28, 24 July 2015
Short description: | p@chr12:7653927..7653941, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7653927..7653941, - |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 4.72e-75 | 3 |
macrophage | 2.19e-17 | 6 |
monopoietic cell | 1.28e-10 | 59 |
monocyte | 1.28e-10 | 59 |
monoblast | 1.28e-10 | 59 |
promonocyte | 1.28e-10 | 59 |
macrophage dendritic cell progenitor | 2.77e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.57e-09 | 66 |
granulocyte monocyte progenitor cell | 2.15e-09 | 67 |
myeloid leukocyte | 9.18e-09 | 72 |
endothelial cell | 6.26e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.61e-26 | 1 |
immune system | 5.96e-13 | 93 |
hemolymphoid system | 3.60e-11 | 108 |
spleen | 1.81e-09 | 3 |
gastrointestinal system mesentery | 1.81e-09 | 3 |
stomach region | 1.81e-09 | 3 |
mesentery | 1.81e-09 | 3 |
gastrointestinal system serosa | 1.81e-09 | 3 |
mesentery of stomach | 1.81e-09 | 3 |
gut mesentery | 1.81e-09 | 3 |
dorsal mesentery | 1.81e-09 | 3 |
dorsal mesogastrium | 1.81e-09 | 3 |
peritoneal cavity | 1.81e-09 | 3 |
spleen primordium | 1.81e-09 | 3 |
hematopoietic system | 4.06e-09 | 98 |
blood island | 4.06e-09 | 98 |
bone marrow | 2.57e-08 | 76 |
bone element | 9.98e-08 | 82 |
skeletal element | 4.64e-07 | 90 |