FFCP PHASE1:Hg19::chr12:71182695..71182705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5801 | |EntrezGene=5801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9680 | |HGNC=9680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010stq.1_5end | |association_with_transcript=0bp_to_uc010stq.1_5end | ||
|cluster_id=chr12:71182695..71182705,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_23_at_PTPRR_5end | |description=CAGE_peak_23_at_PTPRR_5end | ||
|id=chr12:71182695..71182705,- | |id=chr12:71182695..71182705,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.15e-29!12;UBERON:0002028!1.15e-29!12;UBERON:0007277!1.15e-29!12;UBERON:0004732!1.97e-27!13;UBERON:0003076!7.51e-24!15;UBERON:0003057!7.51e-24!15;UBERON:0002336!6.40e-23!1;UBERON:0001018!6.40e-23!1;UBERON:0002473!6.40e-23!1;UBERON:0005340!6.40e-23!1;UBERON:0002316!6.40e-23!1;UBERON:0003544!6.40e-23!1;UBERON:0001020!6.40e-23!1;UBERON:0005970!6.40e-23!1;UBERON:0002437!6.40e-23!1;UBERON:0002680!1.08e-22!9;UBERON:0001895!1.08e-22!9;UBERON:0010092!1.08e-22!9;UBERON:0002037!8.39e-16!6;UBERON:0006215!8.39e-16!6;UBERON:0005162!3.62e-12!2;UBERON:0000122!3.62e-12!2;UBERON:0002298!6.51e-12!8;UBERON:0001049!1.19e-09!57;UBERON:0005068!1.19e-09!57;UBERON:0006241!1.19e-09!57;UBERON:0007135!1.19e-09!57;UBERON:0002616!2.47e-09!59;UBERON:0001896!1.21e-08!3;UBERON:0005290!1.21e-08!3;UBERON:0010096!1.21e-08!3;UBERON:0000988!1.40e-08!3;UBERON:0000073!3.66e-08!94;UBERON:0001016!3.66e-08!94;UBERON:0000955!6.62e-08!69;UBERON:0006238!6.62e-08!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.07e-18;6!UBERON:0002680;2.45e-12;9!UBERON:0001895;2.45e-12;9!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.07e-18,6;UBERON:0006215,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p23@PTPRR | |short_description=p23@PTPRR | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p23@PTPRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PTPRR_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_uc010stq.1_5end |
EntrezGene: | PTPRR |
HGNC: | 9680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.07e-18 | 6 |
rhombic lip | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |