FFCP PHASE1:Mm9::chr1:128726948..128726966,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210356 | |EntrezGene=210356 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=91bp_to_ENSMUST00000162647_5end | |association_with_transcript=91bp_to_ENSMUST00000162647_5end | ||
|cluster_id=chr1:128726948..128726966,- | |||
|description=CAGE_peak_5_at_Nckap5_5end | |description=CAGE_peak_5_at_Nckap5_5end | ||
|id=chr1:128726948..128726966,- | |id=chr1:128726948..128726966,- | ||
|ontology_enrichment_celltype=CL:0000221!1.97e-07!44;CL:0000133!1.97e-07!44;CL:0002319!7.04e-07!43 | |ontology_enrichment_celltype=CL:0000221!1.97e-07!44;CL:0000133!1.97e-07!44;CL:0002319!7.04e-07!43 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.38e-15!73;UBERON:0005743!8.38e-15!73;UBERON:0000073!3.75e-14!75;UBERON:0001016!3.75e-14!75;UBERON:0001049!2.15e-13!52;UBERON:0005068!2.15e-13!52;UBERON:0006241!2.15e-13!52;UBERON:0007135!2.15e-13!52;UBERON:0004121!4.38e-13!102;UBERON:0000924!4.38e-13!102;UBERON:0006601!4.38e-13!102;UBERON:0002020!5.06e-12!34;UBERON:0000033!6.72e-12!63;UBERON:0003056!1.75e-11!49;UBERON:0002346!3.08e-11!71;UBERON:0003075!3.08e-11!71;UBERON:0007284!3.08e-11!71;UBERON:0000955!2.81e-10!50;UBERON:0006238!2.81e-10!50;UBERON:0002616!3.14e-10!49;UBERON:0003080!3.35e-10!40;UBERON:0002780!3.40e-10!39;UBERON:0001890!3.40e-10!39;UBERON:0006240!3.40e-10!39;UBERON:0002791!4.26e-09!29;UBERON:0003528!4.26e-09!29;UBERON:0001893!4.26e-09!29;UBERON:0000956!6.68e-09!21;UBERON:0001869!6.68e-09!21;UBERON:0000203!6.68e-09!21;UBERON:0000153!1.24e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.99e-12,73;UBERON:0002020,8.54e-12,34;UBERON:0001049,1.09e-09,52;UBERON:0005068,1.09e-09,52;UBERON:0006241,1.09e-09,52;UBERON:0007135,1.09e-09,52;UBERON:0004121,1.42e-09,95;UBERON:0000924,1.42e-09,95;UBERON:0006601,1.42e-09,95;UBERON:0002346,3.74e-09,64;UBERON:0003075,3.74e-09,64;UBERON:0007284,3.74e-09,64;UBERON:0000073,5.25e-09,54;UBERON:0002780,2.14e-08,39;UBERON:0001890,2.14e-08,39;UBERON:0006240,2.14e-08,39;UBERON:0003056,2.45e-08,49;UBERON:0001017,3.10e-08,73;UBERON:0003528,5.02e-08,29;UBERON:0002791,5.02e-08,29;UBERON:0001893,5.02e-08,29;UBERON:0003080,5.12e-08,40;UBERON:0001016,9.43e-08,75;UBERON:0000956,2.51e-07,21;UBERON:0001869,2.51e-07,21;UBERON:0000203,2.51e-07,21;UBERON:0002616,6.38e-07,46 | |||
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| ||
|short_description=p5@Nckap5 | |short_description=p5@Nckap5 | ||
}} | }} |
Latest revision as of 07:12, 26 September 2015
Short description: | p5@Nckap5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nckap5_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENSMUST00000162647_5end |
EntrezGene: | Nckap5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 5.99e-12 | 73 |
gray matter | 8.54e-12 | 34 |
neural tube | 1.09e-09 | 52 |
neural rod | 1.09e-09 | 52 |
future spinal cord | 1.09e-09 | 52 |
neural keel | 1.09e-09 | 52 |
ectoderm-derived structure | 1.42e-09 | 95 |
ectoderm | 1.42e-09 | 95 |
presumptive ectoderm | 1.42e-09 | 95 |
neurectoderm | 3.74e-09 | 64 |
neural plate | 3.74e-09 | 64 |
presumptive neural plate | 3.74e-09 | 64 |
regional part of nervous system | 5.25e-09 | 54 |
regional part of forebrain | 2.14e-08 | 39 |
forebrain | 2.14e-08 | 39 |
future forebrain | 2.14e-08 | 39 |
pre-chordal neural plate | 2.45e-08 | 49 |
central nervous system | 3.10e-08 | 73 |
brain grey matter | 5.02e-08 | 29 |
regional part of telencephalon | 5.02e-08 | 29 |
telencephalon | 5.02e-08 | 29 |
anterior neural tube | 5.12e-08 | 40 |
nervous system | 9.43e-08 | 75 |
cerebral cortex | 2.51e-07 | 21 |
cerebral hemisphere | 2.51e-07 | 21 |
pallium | 2.51e-07 | 21 |
regional part of brain | 6.38e-07 | 46 |