FFCP PHASE1:Mm9::chr1:112873943..112873959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227485 | |EntrezGene=227485 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3A7,B2RXP4 | |UniProt=E9Q3A7,B2RXP4 | ||
|association_with_transcript=0bp_to_ENSMUST00000094626,NM_001081386,uc007chx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000094626,NM_001081386,uc007chx.1_5end | ||
|cluster_id=chr1:112873943..112873959,- | |||
|description=CAGE_peak_1_at_Cdh19_5end | |description=CAGE_peak_1_at_Cdh19_5end | ||
|id=chr1:112873943..112873959,- | |id=chr1:112873943..112873959,- | ||
|ontology_enrichment_celltype=CL:0000107!1.78e-08!9 | |ontology_enrichment_celltype=CL:0000107!1.78e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.84e-16,9;CL:0000221,9.46e-13,44;CL:0000133,9.46e-13,44;CL:0000393,5.24e-12,39;CL:0000211,5.24e-12,39;CL:0002319,1.10e-11,43;CL:0002321,1.74e-10,70;CL:0000540,2.13e-10,33;CL:0000047,2.13e-10,33;CL:0000031,2.13e-10,33;CL:0000404,2.13e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.19e-14!102;UBERON:0000924!1.19e-14!102;UBERON:0006601!1.19e-14!102;UBERON:0000010!4.47e-10!11;UBERON:0002410!1.78e-08!9;UBERON:0000073!3.06e-08!75;UBERON:0001016!3.06e-08!75;UBERON:0001017!2.99e-07!73;UBERON:0005743!2.99e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.54e-20,11;UBERON:0004121,3.63e-17,95;UBERON:0000924,3.63e-17,95;UBERON:0006601,3.63e-17,95;UBERON:0002410,1.84e-16,9;UBERON:0001016,2.33e-16,75;UBERON:0001017,3.30e-14,73;UBERON:0010314,8.35e-08,92;UBERON:0002950,4.73e-07,4;UBERON:0001891,4.73e-07,4;UBERON:0009616,4.73e-07,4;UBERON:0010286,4.73e-07,4 | |||
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| ||
|short_description=p1@Cdh19 | |short_description=p1@Cdh19 | ||
}} | }} |
Latest revision as of 06:01, 26 September 2015
Short description: | p1@Cdh19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdh19_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 0bp_to_ENSMUST00000094626, NM_001081386, uc007chx.1_5end |
EntrezGene: | Cdh19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.84e-16 | 9 |
ectodermal cell | 9.46e-13 | 44 |
neurectodermal cell | 9.46e-13 | 44 |
electrically responsive cell | 5.24e-12 | 39 |
electrically active cell | 5.24e-12 | 39 |
neural cell | 1.10e-11 | 43 |
embryonic cell | 1.74e-10 | 70 |
neuron | 2.13e-10 | 33 |
neuronal stem cell | 2.13e-10 | 33 |
neuroblast | 2.13e-10 | 33 |
electrically signaling cell | 2.13e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.54e-20 | 11 |
ectoderm-derived structure | 3.63e-17 | 95 |
ectoderm | 3.63e-17 | 95 |
presumptive ectoderm | 3.63e-17 | 95 |
autonomic nervous system | 1.84e-16 | 9 |
nervous system | 2.33e-16 | 75 |
central nervous system | 3.30e-14 | 73 |
structure with developmental contribution from neural crest | 8.35e-08 | 92 |
regional part of midbrain | 4.73e-07 | 4 |
midbrain | 4.73e-07 | 4 |
presumptive midbrain | 4.73e-07 | 4 |
midbrain neural tube | 4.73e-07 | 4 |