FFCP PHASE1:Mm9::chr10:59324230..59324251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216001 | |EntrezGene=216001 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENSMUST00000166565_5end | |association_with_transcript=-14bp_to_ENSMUST00000166565_5end | ||
|cluster_id=chr10:59324230..59324251,+ | |||
|description=CAGE_peak_4_at_Cbara1_5end | |description=CAGE_peak_4_at_Cbara1_5end | ||
|id=chr10:59324230..59324251,+ | |id=chr10:59324230..59324251,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.37e-30!18;UBERON:0005564!1.37e-30!18;UBERON:0004176!4.06e-28!17;UBERON:0009196!4.06e-28!17;UBERON:0009117!4.06e-28!17;UBERON:0003133!4.72e-22!24;UBERON:0000473!2.67e-21!14;UBERON:0005156!4.40e-20!26;UBERON:0000990!4.40e-20!26;UBERON:0003135!1.01e-19!15;UBERON:0003101!2.44e-18!16;UBERON:0000079!2.44e-18!16;UBERON:0002323!6.33e-15!37;UBERON:0004458!6.33e-15!37;UBERON:0003886!1.96e-14!38;UBERON:0002553!5.73e-14!39;UBERON:0002369!9.80e-14!7;UBERON:0006858!9.80e-14!7;UBERON:0000464!1.39e-09!57;UBERON:0002342!2.19e-09!10;UBERON:0005062!2.19e-09!10;UBERON:0000992!1.68e-08!3 | |ontology_enrichment_uberon=UBERON:0000991!1.37e-30!18;UBERON:0005564!1.37e-30!18;UBERON:0004176!4.06e-28!17;UBERON:0009196!4.06e-28!17;UBERON:0009117!4.06e-28!17;UBERON:0003133!4.72e-22!24;UBERON:0000473!2.67e-21!14;UBERON:0005156!4.40e-20!26;UBERON:0000990!4.40e-20!26;UBERON:0003135!1.01e-19!15;UBERON:0003101!2.44e-18!16;UBERON:0000079!2.44e-18!16;UBERON:0002323!6.33e-15!37;UBERON:0004458!6.33e-15!37;UBERON:0003886!1.96e-14!38;UBERON:0002553!5.73e-14!39;UBERON:0002369!9.80e-14!7;UBERON:0006858!9.80e-14!7;UBERON:0000464!1.39e-09!57;UBERON:0002342!2.19e-09!10;UBERON:0005062!2.19e-09!10;UBERON:0000992!1.68e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.12e-21,18;UBERON:0005564,1.12e-21,18;UBERON:0002369,2.93e-18,7;UBERON:0006858,2.93e-18,7;UBERON:0004176,4.43e-17,17;UBERON:0009196,4.43e-17,17;UBERON:0009117,4.43e-17,17;UBERON:0003133,3.42e-16,24;UBERON:0005156,6.34e-15,26;UBERON:0000990,6.34e-15,26;UBERON:0000473,1.10e-14,14;UBERON:0003135,1.03e-13,15;UBERON:0003101,7.36e-13,16;UBERON:0000079,7.36e-13,16;UBERON:0002323,2.21e-10,37;UBERON:0004458,2.21e-10,37;UBERON:0003886,4.24e-10,38;UBERON:0002553,7.88e-10,39;UBERON:0003064,2.64e-09,14;UBERON:0000926,2.47e-07,120;UBERON:0004120,2.47e-07,120;UBERON:0006603,2.47e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75808620482466,1.56136794089522,0,1.38369298353635,0.60289056221049,0.705532242814229,1.38233250462643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,2.31485284767432,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,6.20062232552609,0.448549638131936,0.827292452285488,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,2.99470085141085,11.3248091979768,6.52277126230216,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75808620482466,1.56136794089522,0,1.38369298353635,0.60289056221049,0.705532242814229,1.38233250462643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,2.31485284767432,0.651547837414304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,6.20062232552609,0.448549638131936,0.827292452285488,0.388902376688095,0.387479470433193,0.168956125490778,0.352071715937262,2.99470085141085,11.3248091979768,6.52277126230216,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Cbara1 | |short_description=p4@Cbara1 | ||
}} | }} |
Latest revision as of 02:59, 26 September 2015
Short description: | p4@Cbara1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cbara1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENSMUST00000166565_5end |
EntrezGene: | Cbara1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 1.12e-21 | 18 |
gonad primordium | 1.12e-21 | 18 |
adrenal gland | 2.93e-18 | 7 |
adrenal/interrenal gland | 2.93e-18 | 7 |
external genitalia | 4.43e-17 | 17 |
indifferent external genitalia | 4.43e-17 | 17 |
indifferent gonad | 4.43e-17 | 17 |
reproductive organ | 3.42e-16 | 24 |
reproductive structure | 6.34e-15 | 26 |
reproductive system | 6.34e-15 | 26 |
testis | 1.10e-14 | 14 |
male reproductive organ | 1.03e-13 | 15 |
male organism | 7.36e-13 | 16 |
male reproductive system | 7.36e-13 | 16 |
body cavity | 2.21e-10 | 37 |
body cavity or lining | 2.21e-10 | 37 |
body cavity precursor | 4.24e-10 | 38 |
anatomical cavity | 7.88e-10 | 39 |
intermediate mesoderm | 2.64e-09 | 14 |
mesoderm | 2.47e-07 | 120 |
mesoderm-derived structure | 2.47e-07 | 120 |
presumptive mesoderm | 2.47e-07 | 120 |