FFCP PHASE1:Mm9::chr3:116511136..116511186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77559 | |EntrezGene=77559 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8VPN4 | |UniProt=F8VPN4 | ||
|association_with_transcript=-52bp_to_ENSMUST00000040603,NM_001081326,uc008rcq.1,uc008rcs.1,uc012cwu.1_5end | |association_with_transcript=-52bp_to_ENSMUST00000040603,NM_001081326,uc008rcq.1,uc008rcs.1,uc012cwu.1_5end | ||
|cluster_id=chr3:116511136..116511186,- | |||
|description=CAGE_peak_3_at_Agl_5end | |description=CAGE_peak_3_at_Agl_5end | ||
|id=chr3:116511136..116511186,- | |id=chr3:116511136..116511186,- | ||
|ontology_enrichment_celltype=CL:0000117!2.76e-13!23;CL:0000337!2.76e-13!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!3.84e-10!39;CL:0000211!3.84e-10!39;CL:0000221!1.43e-08!44;CL:0000133!1.43e-08!44;CL:0002319!3.02e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-13,23;CL:0000337,2.17e-13,23;CL:0000540,9.41e-13,33;CL:0000047,9.41e-13,33;CL:0000031,9.41e-13,33;CL:0000404,9.41e-13,33;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002319,2.68e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.30e-09!73;UBERON:0005743!1.30e-09!73;UBERON:0000073!3.40e-09!75;UBERON:0001016!3.40e-09!75;UBERON:0000153!6.64e-09!94;UBERON:0001049!2.90e-08!52;UBERON:0005068!2.90e-08!52;UBERON:0006241!2.90e-08!52;UBERON:0007135!2.90e-08!52;UBERON:0004121!3.18e-08!102;UBERON:0000924!3.18e-08!102;UBERON:0006601!3.18e-08!102;UBERON:0007811!1.17e-07!86;UBERON:0002616!2.00e-07!49;UBERON:0002020!3.23e-07!34;UBERON:0000955!4.72e-07!50;UBERON:0006238!4.72e-07!50;UBERON:0000033!5.74e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.54e-10,95;UBERON:0000924,4.54e-10,95;UBERON:0006601,4.54e-10,95;UBERON:0001017,1.12e-09,73;UBERON:0010371,2.71e-09,73;UBERON:0001016,2.95e-09,75;UBERON:0000073,3.72e-09,54;UBERON:0001049,2.52e-08,52;UBERON:0005068,2.52e-08,52;UBERON:0006241,2.52e-08,52;UBERON:0007135,2.52e-08,52;UBERON:0002346,3.28e-08,64;UBERON:0003075,3.28e-08,64;UBERON:0007284,3.28e-08,64;UBERON:0002020,2.88e-07,34 | |||
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| |phase1_expression=4.32401887182944,0.697950815278722,0.909998478779072,0,0,0.503637815735669,0.467225281191051,1.03298658753261,0,0.70219357896598,0,1.03703806693937,0.171200729931206,0.699363219351979,0.666219523631325,1.01237633694913,0.699561878128147,1.73504190947031,2.05671650408608,3.39511721438424,3.40173160604279,0.695036658406197,0.261199789138935,0.319984845586813,1.14704640533585,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,1.27006134691926,1.84519436275371,0,0.866554859253824,0.664938581433969,0.204169356262369,1.67412652294763,0,3.14114246384279,4.1176204162171,2.73218193983378,3.88408282424923,1.6366586336825,2.33166941804883,2.0190142737785,4.69434806608824,1.30815093828268,1.5378032791413,1.94429899074283,2.93971485413261,0,1.51004345451963,0,2.35265659399725,1.80081605225163,2.57880095944881,2.06268836910977,10.5204559646991,7.93486468908049,8.23980824558033,2.37191172448392,3.55717918444456,0,1.97773272513395,0,1.19840044207362,0.768436610643109,10.6800300677732,8.50537411489651,9.46462326081219,5.14171771926846,5.52171352379034,9.0643191419066,8.62609239164127,10.1114066527102,7.70811166995721,5.61824287574826,4.6081959976873,8.04506355154182,8.41686321142169,8.33461392890816,6.14202597803038,4.50210088025344,6.26472815884921,4.12480019663135,5.41012387036591,7.64237727883732,1.74170244666323,2.26714680320357,0.289864488701678,0,0,0,0,0,1.96622188184453,1.1930122580464,0.259786004602869,2.82671659608272,5.0703631119605,1.28326477414318,0,7.11066703153331,2.81438353314578,3.54703811665138,0,0.79928715803342,1.03575153458869,1.1875371125186,2.60227990149204,0.913396434936424,2.53677046981664,1.05505848386836,1.76383060703557,1.13099932196708,4.44950941921873,0.722996784599558,0,4.20593809863264,1.10420759230197,2.42437626567611,1.86391761218122,2.63502717310392,1.46612694769419,0.510914110417183,0.599075622529601,0.599902730993408,1.39777249780371,5.09288173976397,1.37250180845588,9.92669381691629,3.82413504423008,3.06858548796397,2.70124457927428,4.54275536589721,5.49932564791708,2.23932547098167,2.0217820674694,1.26265113531884,3.90361328888111,2.75882525320168,4.32149111532838,3.31550599238573,4.96666443804693,2.94661556655154,3.46696380870997,2.06962696591213,1.72454394346274,5.10586416453112,7.9178005873777,7.01426343768239,9.45360647367033,3.83077383174383,3.90986059175093,3.98068533636986,0,0.257347907114715,1.13665399758237,4.34964122324554,3.98694301967864,3.24111710629827,3.07768156260773,2.36117078096885,2.00547246753592,2.55787339225449,2.14618721119695,2.80236821681207,2.96207729844265,0.985004784474571,1.4592385718254,1.02339991197733,0.219550115291051,0.939444931322602,3.15434922846191,7.51203670368776,0.330418782983798,1.05780226665418,4.90562976231038,5.34144345279009,3.09281907173024,3.83198696784351,2.89091456998331,4.56541502670142,0.474529061544512,2.63518327558417,1.50801125280162,3.78017296878187,2.53453313254856,1.79763881730844,0.648414149624083,0.995706366271836,1.32767530667157,2.28497025219458,3.38123207019241,3.46207257337034,4.26695471768777,4.69909993265134,3.92066530170395,2.06654207171443,2.19798218977925,1.97435462274881,0,1.16791574001266,1.76903095601883,2.9232074610031,0.405720242777006,0.964708639009667,0.763877555344259,1.15078454980324,0.810676133875177,1.64736847912849,5.75072826109418,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.369506380333209,3.97931964718018,3.91115943460862,2.8856664581782,3.05097322775053,3.1826188913945,2.85652369063216,3.31727201358258,1.57635144106191,3.32197034473162,1.91345722388985,0.491589944147214,1.55416483679306,1.44649058581512,0,3.26343410291226,0.491764273019036,0.275936746304732,3.85321415970701,4.57125577709592,7.37707254195039,1.76729649043061,3.78609863299508,3.12350995437311,2.58508077279359,4.30143836314594,3.11918143715352,4.81230102341015,4.85772842009873,3.21481443702443,2.76701444562566,1.28528526568723,3.12268187458191,4.62970569534864,5.70104357737516,3.29940245945071,0,3.64170954232472,3.32555912661226,1.69744571780308,1.47650946440386,3.07435147943927,2.32585463851399,2.90826983582004,1.42598951353889,1.58018378967908,4.21674434299995,1.03135543248187,2.7235168460303,3.78128297465751,2.71653235943784,4.28674070063185,4.61084607469911,4.63758925765383,4.44282355625727,3.04464949114599,1.87737366450968,3.81297727554876,1.54369878638473,2.96795255294664,7.58882805470756,8.26287071515735,5.72987251215055,7.2221995887827,0.874442509889552,4.63563255026274,0.683483523191411,4.12773735926445,1.29636169158798,1.50694765603753,0.683471138605126,0.686334519619568,1.69978429993855,1.81936888020755,1.38199973804424,0,6.01038387804157,3.65975040828328,4.32021363287205,6.06356058441959,4.36725127492355,4.04593039154462,4.46328660916814,0.785267825952089,1.42576470620972,0,9.58277995763124,3.88743019714345,3.30916980914195,5.44463327363333,3.7456348808542,4.22390313726945,4.10750335260139,5.59878854828985,6.29156066554265,3.38217769156408,4.89651010638371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| ||
|short_description=p3@Agl | |short_description=p3@Agl | ||
}} | }} |
Latest revision as of 12:14, 1 October 2015
Short description: | p3@Agl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Agl_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENSMUST00000040603, NM_001081326, uc008rcq.1, uc008rcs.1, uc012cwu.1_5end |
EntrezGene: | Agl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.17e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-13 | 23 |
neuron | 9.41e-13 | 33 |
neuronal stem cell | 9.41e-13 | 33 |
neuroblast | 9.41e-13 | 33 |
electrically signaling cell | 9.41e-13 | 33 |
electrically responsive cell | 3.22e-10 | 39 |
electrically active cell | 3.22e-10 | 39 |
ectodermal cell | 1.26e-08 | 44 |
neurectodermal cell | 1.26e-08 | 44 |
neural cell | 2.68e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.54e-10 | 95 |
ectoderm | 4.54e-10 | 95 |
presumptive ectoderm | 4.54e-10 | 95 |
central nervous system | 1.12e-09 | 73 |
ecto-epithelium | 2.71e-09 | 73 |
nervous system | 2.95e-09 | 75 |
regional part of nervous system | 3.72e-09 | 54 |
neural tube | 2.52e-08 | 52 |
neural rod | 2.52e-08 | 52 |
future spinal cord | 2.52e-08 | 52 |
neural keel | 2.52e-08 | 52 |
neurectoderm | 3.28e-08 | 64 |
neural plate | 3.28e-08 | 64 |
presumptive neural plate | 3.28e-08 | 64 |
gray matter | 2.88e-07 | 34 |