FFCP PHASE1:Mm9::chr10:4424156..4424199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56533 | |EntrezGene=56533 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=F8WH97,Q9QZB0 | |UniProt=F8WH97,Q9QZB0 | ||
|association_with_transcript=0bp_to_ENSMUST00000019909,ENSMUST00000117676_5end | |association_with_transcript=0bp_to_ENSMUST00000019909,ENSMUST00000117676_5end | ||
|cluster_id=chr10:4424156..4424199,+ | |||
|description=CAGE_peak_1_at_Rgs17_5end | |description=CAGE_peak_1_at_Rgs17_5end | ||
|id=chr10:4424156..4424199,+ | |id=chr10:4424156..4424199,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.14e-11!23;CL:0000337!1.14e-11!23;CL:0000540!1.46e-09!33;CL:0000047!1.46e-09!33;CL:0000031!1.46e-09!33;CL:0000404!1.46e-09!33;CL:0002319!9.12e-09!43;CL:0000221!1.85e-08!44;CL:0000133!1.85e-08!44;CL:0000393!1.89e-07!39;CL:0000211!1.89e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.14e-11!23;CL:0000337!1.14e-11!23;CL:0000540!1.46e-09!33;CL:0000047!1.46e-09!33;CL:0000031!1.46e-09!33;CL:0000404!1.46e-09!33;CL:0002319!9.12e-09!43;CL:0000221!1.85e-08!44;CL:0000133!1.85e-08!44;CL:0000393!1.89e-07!39;CL:0000211!1.89e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.00e-12,23;CL:0000337,6.00e-12,23;CL:0000540,1.31e-09,33;CL:0000047,1.31e-09,33;CL:0000031,1.31e-09,33;CL:0000404,1.31e-09,33;CL:0002319,1.71e-08,43;CL:0000221,3.41e-08,44;CL:0000133,3.41e-08,44;CL:0000393,2.35e-07,39;CL:0000211,2.35e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.15e-24!75;UBERON:0001016!4.15e-24!75;UBERON:0001017!7.61e-24!73;UBERON:0005743!7.61e-24!73;UBERON:0001049!1.96e-22!52;UBERON:0005068!1.96e-22!52;UBERON:0006241!1.96e-22!52;UBERON:0007135!1.96e-22!52;UBERON:0000955!3.16e-21!50;UBERON:0006238!3.16e-21!50;UBERON:0002616!1.22e-20!49;UBERON:0002346!5.96e-20!71;UBERON:0003075!5.96e-20!71;UBERON:0007284!5.96e-20!71;UBERON:0000033!2.67e-18!63;UBERON:0002020!6.06e-18!34;UBERON:0003080!1.38e-17!40;UBERON:0003056!2.94e-17!49;UBERON:0004121!3.30e-17!102;UBERON:0000924!3.30e-17!102;UBERON:0006601!3.30e-17!102;UBERON:0002780!7.29e-17!39;UBERON:0001890!7.29e-17!39;UBERON:0006240!7.29e-17!39;UBERON:0002791!6.92e-15!29;UBERON:0003528!6.92e-15!29;UBERON:0001893!6.92e-15!29;UBERON:0000956!1.25e-10!21;UBERON:0001869!1.25e-10!21;UBERON:0000203!1.25e-10!21;UBERON:0002619!2.83e-10!17;UBERON:0007811!7.96e-09!86;UBERON:0000468!6.00e-08!333;UBERON:0000153!9.76e-08!94;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!4.15e-24!75;UBERON:0001016!4.15e-24!75;UBERON:0001017!7.61e-24!73;UBERON:0005743!7.61e-24!73;UBERON:0001049!1.96e-22!52;UBERON:0005068!1.96e-22!52;UBERON:0006241!1.96e-22!52;UBERON:0007135!1.96e-22!52;UBERON:0000955!3.16e-21!50;UBERON:0006238!3.16e-21!50;UBERON:0002616!1.22e-20!49;UBERON:0002346!5.96e-20!71;UBERON:0003075!5.96e-20!71;UBERON:0007284!5.96e-20!71;UBERON:0000033!2.67e-18!63;UBERON:0002020!6.06e-18!34;UBERON:0003080!1.38e-17!40;UBERON:0003056!2.94e-17!49;UBERON:0004121!3.30e-17!102;UBERON:0000924!3.30e-17!102;UBERON:0006601!3.30e-17!102;UBERON:0002780!7.29e-17!39;UBERON:0001890!7.29e-17!39;UBERON:0006240!7.29e-17!39;UBERON:0002791!6.92e-15!29;UBERON:0003528!6.92e-15!29;UBERON:0001893!6.92e-15!29;UBERON:0000956!1.25e-10!21;UBERON:0001869!1.25e-10!21;UBERON:0000203!1.25e-10!21;UBERON:0002619!2.83e-10!17;UBERON:0007811!7.96e-09!86;UBERON:0000468!6.00e-08!333;UBERON:0000153!9.76e-08!94;UBERON:0002021!1.43e-07!10;UBERON:0000411!1.43e-07!10;UBERON:0001950!1.43e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.20e-24,54;UBERON:0001016,4.53e-24,75;UBERON:0001017,8.50e-24,73;UBERON:0001049,9.46e-23,52;UBERON:0005068,9.46e-23,52;UBERON:0006241,9.46e-23,52;UBERON:0007135,9.46e-23,52;UBERON:0002346,3.51e-22,64;UBERON:0003075,3.51e-22,64;UBERON:0007284,3.51e-22,64;UBERON:0000955,2.36e-19,47;UBERON:0006238,2.36e-19,47;UBERON:0002616,9.11e-19,46;UBERON:0002020,2.13e-18,34;UBERON:0004121,2.69e-18,95;UBERON:0000924,2.69e-18,95;UBERON:0006601,2.69e-18,95;UBERON:0003080,4.96e-18,40;UBERON:0003056,1.08e-17,49;UBERON:0002780,2.75e-17,39;UBERON:0001890,2.75e-17,39;UBERON:0006240,2.75e-17,39;UBERON:0010371,3.24e-16,73;UBERON:0003528,2.96e-15,29;UBERON:0002791,2.96e-15,29;UBERON:0001893,2.96e-15,29;UBERON:0010314,7.12e-14,92;UBERON:0000956,7.04e-11,21;UBERON:0001869,7.04e-11,21;UBERON:0000203,7.04e-11,21;UBERON:0002619,1.62e-10,17;UBERON:0002021,9.77e-08,10;UBERON:0000411,9.77e-08,10;UBERON:0001950,9.77e-08,10 | |||
|phase1_expression=2.08193501236232,0,2.27499619694768,0.30246421130683,0,5.54001597309236,5.84031601488814,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0,0,0,0,0,9.86502165752409,0,0,1.43993180514066,0.45881856213434,0.57423196411502,1.7230479846363,2.58565479223067,2.28028103347649,1.00812051903972,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,1.65192076945513,0.782391344348039,1.09012578190223,6.37089929929968,6.9994763666742,3.07970127575798,2.87505128729943,0,0,0,1.28629718017973,4.87106847895886,1.03134418455488,13.5552028775931,11.6378015439847,11.4089652631112,2.71075625655306,0.889294796111139,0,0,0,2.39680088414724,0.768436610643109,4.56234294157302,3.37514845829227,3.78584930432488,44.5615535669934,43.9528396493711,10.779190330916,7.28425579738596,14.7075005857603,85.8903871795232,60.3961109142938,85.2516259572151,13.9799464994005,11.5274430939036,13.5437476344758,54.4406848052693,53.4624479530096,55.1601674474284,78.9604609069429,76.4535925891183,22.927131836512,4.84647637332378,3.77857800533928,0.869593466105033,0,0,0.539703191637817,0,0,2.66844398250329,0.852151612890289,2.85764605063156,0,1.26759077799012,0,0,0,4.76280290224671,7.34743609877786,3.0331466700887,1.37020655662872,2.58937883647172,1.1875371125186,3.12273588179045,2.43572382649713,1.61430848079241,1.80867168663147,3.17489509266403,0.753999547978053,14.3373081285937,1.73519228303894,0,0.323533699894818,0,0,3.72783522436244,26.9358333250623,16.3368431314495,1.27728527604296,0,0,0,93.768940267419,55.3575729410538,34.8062555352634,55.1023095009516,47.8187905207718,66.2843862144997,53.7018580754278,7.43427356107309,0.248813941220186,0.505445516867349,2.31486041475121,1.82168620147785,1.83921683546778,5.94205028357652,6.0281927134286,4.62648194229029,3.71529788826064,3.74806898238915,3.3631438196072,1.5089759505299,1.89106080167819,1.05570674498369,0.876782929710299,0.834141747676794,1.74126083261083,1.85203922767149,3.18454826909589,0,0,0,1.44988040774851,1.40715635988658,1.2604344302271,2.13070262026689,1.37734962223183,1.3884040159864,1.62773761325285,1.3413670069981,1.75148013550754,0.822799249567402,1.14917224855367,1.4592385718254,2.19299981137998,0.439100230582101,2.01309628140558,33.015521924568,12.9659811597898,0.660837565967596,0.528901133327089,1.49301775374664,5.80591679651096,2.70621668776396,3.02525286935014,1.77902435075896,3.23383564391351,0.949058123089023,1.15289268306808,3.51869292320377,2.38747766449381,1.9496408711912,3.59527763461689,3.02593269824572,3.58454291857861,0.379335801906163,2.39921876480431,1.1270773567308,1.22190796707189,1.35766741017338,1.1221731182451,0.822074982615345,0,0.31399745568275,0,0,0.500535317148282,1.17935397067922,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,2.87536413054709,1.11642284300551,0,0.505157755894224,0,0,2.21703828199926,1.32643988239339,0.977789858652155,1.01847051465113,0.469380496577004,2.01007508930179,2.85652369063216,1.17080188714679,0.945810864637146,0.8858587585951,0.956728611944923,1.14704320301017,0.863424909329478,1.3018415272336,0,0,0.491764273019036,0.275936746304732,64.7018877650802,68.4516249698466,2.45902418065013,0,2.83957397474631,1.17131623288992,5.60100834105277,1.67278158566786,0.668396022247182,1.98153571552183,3.23848561339915,4.09158201075837,5.13874111330481,44.3423416662094,1.98716119291576,5.34196811001766,5.86393053672874,1.15479086080775,0,11.8962511715941,7.25576536715402,7.35559811048003,4.13422650033082,5.84126781093462,6.97756391554197,7.63420831902762,4.9909632973861,1.8962205476149,0,1.03135543248187,9.19186935535228,4.14140516272013,2.06973894052407,3.64372959553707,6.7389288784064,5.70780216326626,5.59466670047211,3.65357938937519,5.86679270159276,61.8549646922355,1.7642271844397,0,1.13025098687134,0.482503399425247,0.119372344003136,0,1.45740418314925,78.8057533544666,0.170870880797853,1.65109494370578,0.925972636848558,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0.138199973804424,5.72802370809068,4.58687190692646,8.13277868507395,5.29226170026826,6.27264888043406,4.36725127492355,2.02296519577231,2.56225712748541,1.83229159388821,1.42576470620972,0,2.81846469342095,3.13984746692355,1.48912641411388,5.25018208528929,3.87479470433193,4.39285926276023,4.3422178298929,6.77062801188541,10.6956531314225,7.00593950395418,3.74439008135225,1.89606672376907,0.810900861160657,2.87590680061516,3.50786222040047,1.43221356533985,1.98681354781265,1.56254084375959,0.886137163047463,1.11063094942962,0.762068066549998,1.71404514732629,2.43644701849381,0.769694733122636,1.05189211963412,0,3.10780334723691,1.43542170575161,5.03653849092235,2.12508553435409,1.87682475451182,2.01466786693992,1.07184189539533,2.00628841614145,64.9464619009626,56.6200040903828,65.8829840455306,63.241971102477,47.2706938641743,68.7408446624627,62.7770925215579,64.3959320610635,60.7210828038834,60.5779564749629,1.86817225651518,2.39414924040619,4.609807355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| ||
|short_description=p1@Rgs17 | |short_description=p1@Rgs17 | ||
}} | }} |
Latest revision as of 01:09, 26 September 2015
Short description: | p1@Rgs17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgs17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000019909, ENSMUST00000117676_5end |
EntrezGene: | Rgs17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.00e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.00e-12 | 23 |
neuron | 1.31e-09 | 33 |
neuronal stem cell | 1.31e-09 | 33 |
neuroblast | 1.31e-09 | 33 |
electrically signaling cell | 1.31e-09 | 33 |
neural cell | 1.71e-08 | 43 |
ectodermal cell | 3.41e-08 | 44 |
neurectodermal cell | 3.41e-08 | 44 |
electrically responsive cell | 2.35e-07 | 39 |
electrically active cell | 2.35e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.20e-24 | 54 |
nervous system | 4.53e-24 | 75 |
central nervous system | 8.50e-24 | 73 |
neural tube | 9.46e-23 | 52 |
neural rod | 9.46e-23 | 52 |
future spinal cord | 9.46e-23 | 52 |
neural keel | 9.46e-23 | 52 |
neurectoderm | 3.51e-22 | 64 |
neural plate | 3.51e-22 | 64 |
presumptive neural plate | 3.51e-22 | 64 |
brain | 2.36e-19 | 47 |
future brain | 2.36e-19 | 47 |
regional part of brain | 9.11e-19 | 46 |
gray matter | 2.13e-18 | 34 |
ectoderm-derived structure | 2.69e-18 | 95 |
ectoderm | 2.69e-18 | 95 |
presumptive ectoderm | 2.69e-18 | 95 |
anterior neural tube | 4.96e-18 | 40 |
pre-chordal neural plate | 1.08e-17 | 49 |
regional part of forebrain | 2.75e-17 | 39 |
forebrain | 2.75e-17 | 39 |
future forebrain | 2.75e-17 | 39 |
ecto-epithelium | 3.24e-16 | 73 |
brain grey matter | 2.96e-15 | 29 |
regional part of telencephalon | 2.96e-15 | 29 |
telencephalon | 2.96e-15 | 29 |
structure with developmental contribution from neural crest | 7.12e-14 | 92 |
cerebral cortex | 7.04e-11 | 21 |
cerebral hemisphere | 7.04e-11 | 21 |
pallium | 7.04e-11 | 21 |
regional part of cerebral cortex | 1.62e-10 | 17 |
occipital lobe | 9.77e-08 | 10 |
visual cortex | 9.77e-08 | 10 |
neocortex | 9.77e-08 | 10 |