FFCP PHASE1:Hg19::chr12:6884167..6884181,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-249bp_to_ENST00000542258_5end | |association_with_transcript=-249bp_to_ENST00000542258_5end | ||
|cluster_id=chr12:6884167..6884181,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_4_at_LAG3_5end | |description=CAGE_peak_4_at_LAG3_5end | ||
|id=chr12:6884167..6884181,+ | |id=chr12:6884167..6884181,+ | ||
|ontology_enrichment_celltype=CL:0000791!3.83e-23!18;CL:0000789!3.83e-23!18;CL:0002420!3.83e-23!18;CL:0002419!3.83e-23!18;CL:0000790!3.83e-23!18;CL:0000625!2.44e-22!11;CL:0000084!1.44e-17!25;CL:0000827!1.44e-17!25;CL:0000838!7.20e-14!52;CL:0000738!1.15e-13!140;CL:0000542!1.77e-13!53;CL:0000051!1.77e-13!53;CL:0002087!3.71e-13!119;CL:0002031!1.31e-09!124;CL:0000037!5.55e-09!172;CL:0000566!5.55e-09!172;CL:0000988!6.74e-08!182;CL:0000623!2.91e-07!3;CL:0000825!2.91e-07!3;CL:0002032!3.34e-07!165;CL:0000837!3.34e-07!165;CL:0000842!9.16e-07!3 | |ontology_enrichment_celltype=CL:0000791!3.83e-23!18;CL:0000789!3.83e-23!18;CL:0002420!3.83e-23!18;CL:0002419!3.83e-23!18;CL:0000790!3.83e-23!18;CL:0000625!2.44e-22!11;CL:0000084!1.44e-17!25;CL:0000827!1.44e-17!25;CL:0000838!7.20e-14!52;CL:0000738!1.15e-13!140;CL:0000542!1.77e-13!53;CL:0000051!1.77e-13!53;CL:0002087!3.71e-13!119;CL:0002031!1.31e-09!124;CL:0000037!5.55e-09!172;CL:0000566!5.55e-09!172;CL:0000988!6.74e-08!182;CL:0000623!2.91e-07!3;CL:0000825!2.91e-07!3;CL:0002032!3.34e-07!165;CL:0000837!3.34e-07!165;CL:0000842!9.16e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.76e-56;11!CL:0000791;9.37e-47;18!CL:0000789;9.37e-47;18!CL:0002419;9.37e-47;18!CL:0000084;7.15e-33;25!CL:0000623;1.34e-16;3!CL:0000542;3.42e-12;53!CL:0000767;9.88e-08;3!CL:0000226;1.00e-07;3!CL:0000842;1.00e-07;3!CL:0002087;2.28e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.95e-56,11;CL:0000791,1.09e-46,18;CL:0000789,1.09e-46,18;CL:0002420,1.09e-46,18;CL:0002419,1.09e-46,18;CL:0000790,1.09e-46,18;CL:0000084,7.95e-33,25;CL:0000827,7.95e-33,25;CL:0000838,2.64e-22,52;CL:0000542,8.15e-22,53;CL:0000051,8.15e-22,53;CL:0000623,1.49e-16,3;CL:0000825,1.49e-16,3;CL:0002087,6.83e-15,115;CL:0000738,9.19e-15,136;CL:0002031,3.68e-11,120;CL:0000037,5.35e-11,168;CL:0000893,5.83e-11,2;CL:0002489,5.83e-11,2;CL:0000809,5.83e-11,2;CL:0000808,5.83e-11,2;CL:0000894,5.83e-11,2;CL:0000806,5.83e-11,2;CL:0000807,5.83e-11,2;CL:0000805,5.83e-11,2;CL:0002425,5.83e-11,2;CL:0000988,3.47e-10,177;CL:0002032,2.37e-09,161;CL:0000837,2.37e-09,161;CL:0000767,8.34e-08,3;CL:0000226,9.88e-08,3;CL:0000842,9.88e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;9.37e-47;18!CL:0000051;3.42e-12;53!CL:0002425;5.26e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.79e-26!115;UBERON:0000178!3.08e-14!15;UBERON:0000179!3.08e-14!15;UBERON:0000463!3.08e-14!15;UBERON:0004177!1.97e-08!7;UBERON:0002193!6.96e-08!112;UBERON:0002390!7.26e-08!102;UBERON:0003061!7.26e-08!102;UBERON:0002370!2.61e-07!4;UBERON:0005058!2.61e-07!4;UBERON:0009113!2.61e-07!4;UBERON:0003295!2.61e-07!4;UBERON:0005562!2.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.54e-25;15!UBERON:0000179;2.54e-25;15!UBERON:0000463;2.54e-25;15!UBERON:0002390;6.58e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.92e-25,15;UBERON:0000179,1.92e-25,15;UBERON:0000463,1.92e-25,15;UBERON:0002390,7.26e-07,98;UBERON:0003061,7.26e-07,98 | |||
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| ||
|short_description=p4@LAG3 | |short_description=p4@LAG3 | ||
}} | }} |
Latest revision as of 03:14, 20 September 2015
Short description: | p4@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAG3_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -249bp_to_ENST00000542258_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.92e-25 | 15 |
haemolymphatic fluid | 1.92e-25 | 15 |
organism substance | 1.92e-25 | 15 |
hematopoietic system | 7.26e-07 | 98 |
blood island | 7.26e-07 | 98 |