Personal tools

FFCP PHASE1:Mm9::chr19:43686789..43686811,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18089
|EntrezGene=18089
|HGNC=
|HGNC=
|MCL_coexpression_id=3196
|TSSclassifier=NA
|UniProt=P97334,E9PVF5
|UniProt=P97334,E9PVF5
|association_with_transcript=-3bp_to_ENSMUST00000057178,ENSMUST00000170485,NM_008699,uc008hok.1_5end
|association_with_transcript=-3bp_to_ENSMUST00000057178,ENSMUST00000170485,NM_008699,uc008hok.1_5end
|cluster_id=chr19:43686789..43686811,+
|description=CAGE_peak_1_at_Nkx2-3_5end
|description=CAGE_peak_1_at_Nkx2-3_5end
|id=chr19:43686789..43686811,+
|id=chr19:43686789..43686811,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!7.96e-25!59;UBERON:0000160!7.80e-16!43;UBERON:0002075!1.24e-11!19;UBERON:0001045!2.11e-09!13;UBERON:0000945!2.13e-09!16;UBERON:0010039!2.13e-09!16;UBERON:0001264!9.59e-09!12;UBERON:0003922!9.59e-09!12;UBERON:0002114!9.59e-09!12;UBERON:0003923!9.59e-09!12;UBERON:0003924!9.59e-09!12;UBERON:0003921!9.59e-09!12;UBERON:0002108!2.39e-08!16;UBERON:0004921!1.47e-07!126;UBERON:0004185!1.47e-07!126;UBERON:0004119!2.27e-07!130;UBERON:0000925!2.27e-07!130;UBERON:0006595!2.27e-07!130;UBERON:0001007!3.97e-07!128;UBERON:0001555!3.97e-07!128;UBERON:0007026!3.97e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.54e-24,47;UBERON:0002075,6.34e-18,19;UBERON:0000945,2.28e-14,16;UBERON:0010039,2.28e-14,16;UBERON:0001264,6.37e-13,12;UBERON:0000160,2.64e-11,31;UBERON:0002106,1.03e-07,6;UBERON:0004457,1.03e-07,6;UBERON:0000042,1.03e-07,6;UBERON:0004854,1.03e-07,6;UBERON:0009034,1.03e-07,6;UBERON:0002095,1.03e-07,6;UBERON:0004782,1.03e-07,6;UBERON:0003281,1.03e-07,6;UBERON:0009664,1.03e-07,6;UBERON:0002296,1.03e-07,6;UBERON:0005602,1.03e-07,6;UBERON:0001179,1.03e-07,6;UBERON:0006293,1.03e-07,6;UBERON:0002553,6.02e-07,39
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,0.473193248037357,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.210324961351382,0,0,5.02212276781312,5.271500906003,3.67687514644008,0,0,0,0.659431438650969,0.457438218012048,1.56274011167028,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0.869593466105033,0.860423876981386,0,0,0,0,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0.301445281105245,0,0,5.19109432242185,0,0,0,0,0,7.45567044872489,0,0,9.45191104271788,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,9.78467096655114,21.7554015545939,23.9203772016252,24.4848176511977,29.6474781196314,28.6867676559883,27.0120389079834,13.7613427847908,23.2225526160855,23.8768448360256,22.8799942847323,24.1755468027709,12.5834717211591,16.6426298403515,10.7536287557358,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.589676985339609,0,0.405720242777006,0.241177159752417,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,5.30980553359851,7.52619972080442,9.37203026590728,2.64047111658257,9.7449624650655,10.4527950300935,12.9214146584111,6.5436071305951,4.27796854061666,2.21225730555071,5.27093042874994,2.06271086496374,0,2.34079422240703,1.16422815404479,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,21.569581910609,0,3.2465467351592,26.4175190992925,16.4823129359043,6.96963290917357,3.14396723758358,7.32090154260872,14.2781881194838,13.4353394230712,17.274996725553,0,4.11236791655476,5.08298667817122,7.23635783506068,3.13632444021703,4.14888871117737,2.42755823492677,2.56225712748541,2.09404753587224,11.9245775428449,3.72803587852155,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.512200817262403,1.70174701947806,0.838452650511929,2.20612210140017,0.888986911206461,1.44224540067226,1.92551525755089,0.758091635291392,1.77435509923168,0.943131706930381,1.12369808963859,1.21647789569252,0.918967503289812,0.476293691283074,1.97003354106254,2.31491064556446,1.23625770240992,1.47198920134397,1.02860775715625,0.354951612318675,0.953744759789284,0.872078499793971,1.31753132581463,1.69229215783353,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,1.37906275325789,0,0.77468420592983,1.54325288784913,0.749431733813838,1.40358965067245,2.36358159453128,0.191288332068843,0,0
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0.999329285446988,0.607425802169478,0,0.473193248037357,0,0,0,0,0,0,0,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0.210324961351382,0,0,5.02212276781312,5.271500906003,3.67687514644008,0,0,0,0.659431438650969,0.457438218012048,1.56274011167028,0,0,0,0,0.142371680799103,0,0.151452386666368,0,0.869593466105033,0.860423876981386,0,0,0,0,0.983110940922263,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0.301445281105245,0,0,5.19109432242185,0,0,0,0,0,7.45567044872489,0,0,9.45191104271788,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0.628271760564322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,9.78467096655114,21.7554015545939,23.9203772016252,24.4848176511977,29.6474781196314,28.6867676559883,27.0120389079834,13.7613427847908,23.2225526160855,23.8768448360256,22.8799942847323,24.1755468027709,12.5834717211591,16.6426298403515,10.7536287557358,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.589676985339609,0,0.405720242777006,0.241177159752417,0.50925170356284,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0.315508219416257,0.780877488593277,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,5.30980553359851,7.52619972080442,9.37203026590728,2.64047111658257,9.7449624650655,10.4527950300935,12.9214146584111,6.5436071305951,4.27796854061666,2.21225730555071,5.27093042874994,2.06271086496374,0,2.34079422240703,1.16422815404479,0.214337035031592,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0.164140899745061,21.569581910609,0,3.2465467351592,26.4175190992925,16.4823129359043,6.96963290917357,3.14396723758358,7.32090154260872,14.2781881194838,13.4353394230712,17.274996725553,0,4.11236791655476,5.08298667817122,7.23635783506068,3.13632444021703,4.14888871117737,2.42755823492677,2.56225712748541,2.09404753587224,11.9245775428449,3.72803587852155,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0,0.512200817262403,1.70174701947806,0.838452650511929,2.20612210140017,0.888986911206461,1.44224540067226,1.92551525755089,0.758091635291392,1.77435509923168,0.943131706930381,1.12369808963859,1.21647789569252,0.918967503289812,0.476293691283074,1.97003354106254,2.31491064556446,1.23625770240992,1.47198920134397,1.02860775715625,0.354951612318675,0.953744759789284,0.872078499793971,1.31753132581463,1.69229215783353,0.548783918618318,0.526139422875686,0.679020569229309,1.12228454331548,0.593175090620871,1.37906275325789,0,0.77468420592983,1.54325288784913,0.749431733813838,1.40358965067245,2.36358159453128,0.191288332068843,0,0
|short_description=p1@Nkx2-3
|short_description=p1@Nkx2-3
}}
}}

Latest revision as of 19:27, 25 September 2015

Short description:p1@Nkx2-3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nkx2-3_5end
Coexpression cluster:MCL_coexpression_mm9:3196
Association with transcript: -3bp_to_ENSMUST00000057178, ENSMUST00000170485, NM_008699, uc008hok.1_5end
EntrezGene:Nkx2-3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nkx2-3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A39.78
intestine, embryo E12.CNhs11019.1251-16I521.76
intestine, embryo E13.CNhs11010.381-16D523.92
intestine, embryo E15.CNhs10602.976-16D824.48
intestine, embryo E16.CNhs10585.463-22H429.65
intestine, embryo E17.CNhs10582.482-18D328.69
intestine, embryo E18.CNhs10526.1289-20F727.01
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E923.22
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F222.88
intestine, neonate N10.CNhs11098.755-23A524.18
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.53
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I710.45
pancreas, neonate N00.CNhs11105.645-26G912.92
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I121.57
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C126.42
spleen, embryo E18.CNhs11011.1271-21F216.48
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.27
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D47.24
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I111.92
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system4.54e-2447
viscus6.34e-1819
stomach2.28e-1416
food storage organ2.28e-1416
pancreas6.37e-1312
intestine2.64e-1131
spleen1.03e-076
cavity lining1.03e-076
serous membrane1.03e-076
gastrointestinal system mesentery1.03e-076
stomach region1.03e-076
mesentery1.03e-076
gastrointestinal system serosa1.03e-076
mesentery of stomach1.03e-076
gut mesentery1.03e-076
dorsal mesentery1.03e-076
dorsal mesogastrium1.03e-076
peritoneal cavity1.03e-076
spleen primordium1.03e-076
anatomical cavity6.02e-0739
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:43686789..43686811,%2B&oldid=4209572"