FFCP PHASE1:Mm9::chr2:74583733..74583738,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15434 | |EntrezGene=15434 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=G3UZS5 | |UniProt=G3UZS5 | ||
|association_with_transcript=2bp_to_ENSMUST00000140666_5end | |association_with_transcript=2bp_to_ENSMUST00000140666_5end | ||
|cluster_id=chr2:74583733..74583738,+ | |||
|description=CAGE_peak_13_at_Hoxd3_5end | |description=CAGE_peak_13_at_Hoxd3_5end | ||
|id=chr2:74583733..74583738,+ | |id=chr2:74583733..74583738,+ | ||
|ontology_enrichment_celltype=CL:0000107!7.51e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.24e-58,9;CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0002319,1.38e-12,43;CL:0000221,2.60e-12,44;CL:0000133,2.60e-12,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.36e-16!14;UBERON:0003918!2.36e-16!14;UBERON:0005095!2.36e-16!14;UBERON:0007687!2.36e-16!14;UBERON:0006554!5.13e-14!16;UBERON:0001008!4.70e-13!17;UBERON:0000489!3.95e-10!21;UBERON:0002410!7.51e-10!9;UBERON:0002005!1.83e-08!3;UBERON:0005428!1.83e-08!3;UBERON:0000013!2.15e-08!3;UBERON:0001301!6.22e-08!3;UBERON:0006555!6.22e-08!3;UBERON:0005103!6.22e-08!3;UBERON:0000083!6.22e-08!3;UBERON:0009201!6.22e-08!3;UBERON:0004819!6.22e-08!3;UBERON:0006553!6.22e-08!3;UBERON:0003074!6.22e-08!3;UBERON:0003060!6.22e-08!3;UBERON:0000010!6.84e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.24e-58,9;UBERON:0000010,1.34e-47,11;UBERON:0010313,3.27e-44,3;UBERON:0002342,3.27e-44,3;UBERON:0002005,3.27e-44,3;UBERON:0005428,3.27e-44,3;UBERON:0005062,3.27e-44,3;UBERON:0000013,8.97e-44,3;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0005157,2.62e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,3.15508219416257,1.95219372148319,3.01592756825919,0,0,0,1.61924280669958,1.75353514746787,3.16230222357219,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,3.15508219416257,1.95219372148319,3.01592756825919,0,0,0,1.61924280669958,1.75353514746787,3.16230222357219,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0,0,0,0,0,0,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@Hoxd3 | |short_description=p13@Hoxd3 | ||
}} | }} |
Latest revision as of 23:31, 26 September 2015
Short description: | p13@Hoxd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Hoxd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 2bp_to_ENSMUST00000140666_5end |
EntrezGene: | Hoxd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.24e-58 | 9 |
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neural cell | 1.38e-12 | 43 |
ectodermal cell | 2.60e-12 | 44 |
neurectodermal cell | 2.60e-12 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.24e-58 | 9 |
peripheral nervous system | 1.34e-47 | 11 |
neural crest-derived structure | 3.27e-44 | 3 |
neural crest | 3.27e-44 | 3 |
enteric nervous system | 3.27e-44 | 3 |
vagal neural crest | 3.27e-44 | 3 |
neural fold | 3.27e-44 | 3 |
sympathetic nervous system | 8.97e-44 | 3 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
epithelial fold | 2.62e-07 | 20 |