FFCP PHASE1:Mm9::chr10:115910931..115910985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58802 | |EntrezGene=58802 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIN6 | |UniProt=Q9JIN6 | ||
|association_with_transcript=0bp_to_ENSMUST00000068233_5end | |association_with_transcript=0bp_to_ENSMUST00000068233_5end | ||
|cluster_id=chr10:115910931..115910985,- | |||
|description=CAGE_peak_1_at_Kcnmb4_5end | |description=CAGE_peak_1_at_Kcnmb4_5end | ||
|id=chr10:115910931..115910985,- | |id=chr10:115910931..115910985,- | ||
|ontology_enrichment_celltype=CL:0000540!1.59e-14!33;CL:0000047!1.59e-14!33;CL:0000031!1.59e-14!33;CL:0000404!1.59e-14!33;CL:0000221!2.23e-12!44;CL:0000133!2.23e-12!44;CL:0002319!8.02e-12!43;CL:0000117!3.97e-11!23;CL:0000337!3.97e-11!23;CL:0000393!5.60e-10!39;CL:0000211!5.60e-10!39;CL:0000055!8.05e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.59e-14!33;CL:0000047!1.59e-14!33;CL:0000031!1.59e-14!33;CL:0000404!1.59e-14!33;CL:0000221!2.23e-12!44;CL:0000133!2.23e-12!44;CL:0002319!8.02e-12!43;CL:0000117!3.97e-11!23;CL:0000337!3.97e-11!23;CL:0000393!5.60e-10!39;CL:0000211!5.60e-10!39;CL:0000055!8.05e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.50e-15,33;CL:0000047,5.50e-15,33;CL:0000031,5.50e-15,33;CL:0000404,5.50e-15,33;CL:0000221,5.08e-12,44;CL:0000133,5.08e-12,44;CL:0000117,1.81e-11,23;CL:0000337,1.81e-11,23;CL:0002319,1.86e-11,43;CL:0000393,5.60e-10,39;CL:0000211,5.60e-10,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.62e-29!75;UBERON:0001016!1.62e-29!75;UBERON:0001017!3.79e-29!73;UBERON:0005743!3.79e-29!73;UBERON:0004121!2.14e-28!102;UBERON:0000924!2.14e-28!102;UBERON:0006601!2.14e-28!102;UBERON:0002346!1.35e-23!71;UBERON:0003075!1.35e-23!71;UBERON:0007284!1.35e-23!71;UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0000153!2.31e-21!94;UBERON:0000033!3.36e-21!63;UBERON:0000955!2.25e-20!50;UBERON:0006238!2.25e-20!50;UBERON:0002616!8.69e-20!49;UBERON:0007811!2.28e-19!86;UBERON:0003056!2.55e-19!49;UBERON:0002780!2.22e-18!39;UBERON:0001890!2.22e-18!39;UBERON:0006240!2.22e-18!39;UBERON:0003080!3.23e-18!40;UBERON:0002020!1.90e-16!34;UBERON:0002791!1.57e-13!29;UBERON:0003528!1.57e-13!29;UBERON:0001893!1.57e-13!29;UBERON:0000956!1.43e-10!21;UBERON:0001869!1.43e-10!21;UBERON:0000203!1.43e-10!21;UBERON:0002619!1.22e-08!17;UBERON:0002021!4.77e-08!10;UBERON:0000411!4.77e-08!10;UBERON:0001950!4.77e-08!10;UBERON:0000479!5.26e-07!349 | |ontology_enrichment_uberon=UBERON:0000073!1.62e-29!75;UBERON:0001016!1.62e-29!75;UBERON:0001017!3.79e-29!73;UBERON:0005743!3.79e-29!73;UBERON:0004121!2.14e-28!102;UBERON:0000924!2.14e-28!102;UBERON:0006601!2.14e-28!102;UBERON:0002346!1.35e-23!71;UBERON:0003075!1.35e-23!71;UBERON:0007284!1.35e-23!71;UBERON:0001049!1.07e-21!52;UBERON:0005068!1.07e-21!52;UBERON:0006241!1.07e-21!52;UBERON:0007135!1.07e-21!52;UBERON:0000153!2.31e-21!94;UBERON:0000033!3.36e-21!63;UBERON:0000955!2.25e-20!50;UBERON:0006238!2.25e-20!50;UBERON:0002616!8.69e-20!49;UBERON:0007811!2.28e-19!86;UBERON:0003056!2.55e-19!49;UBERON:0002780!2.22e-18!39;UBERON:0001890!2.22e-18!39;UBERON:0006240!2.22e-18!39;UBERON:0003080!3.23e-18!40;UBERON:0002020!1.90e-16!34;UBERON:0002791!1.57e-13!29;UBERON:0003528!1.57e-13!29;UBERON:0001893!1.57e-13!29;UBERON:0000956!1.43e-10!21;UBERON:0001869!1.43e-10!21;UBERON:0000203!1.43e-10!21;UBERON:0002619!1.22e-08!17;UBERON:0002021!4.77e-08!10;UBERON:0000411!4.77e-08!10;UBERON:0001950!4.77e-08!10;UBERON:0000479!5.26e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.49e-29,75;UBERON:0001017,3.62e-29,73;UBERON:0004121,9.74e-29,95;UBERON:0000924,9.74e-29,95;UBERON:0006601,9.74e-29,95;UBERON:0002346,4.21e-24,64;UBERON:0003075,4.21e-24,64;UBERON:0007284,4.21e-24,64;UBERON:0010371,6.59e-24,73;UBERON:0000073,1.07e-22,54;UBERON:0001049,1.81e-21,52;UBERON:0005068,1.81e-21,52;UBERON:0006241,1.81e-21,52;UBERON:0007135,1.81e-21,52;UBERON:0003056,1.23e-19,49;UBERON:0002780,1.22e-18,39;UBERON:0001890,1.22e-18,39;UBERON:0006240,1.22e-18,39;UBERON:0000955,1.23e-18,47;UBERON:0006238,1.23e-18,47;UBERON:0003080,1.78e-18,40;UBERON:0002616,4.79e-18,46;UBERON:0010314,3.91e-17,92;UBERON:0002020,1.23e-16,34;UBERON:0003528,1.25e-13,29;UBERON:0002791,1.25e-13,29;UBERON:0001893,1.25e-13,29;UBERON:0000956,1.47e-10,21;UBERON:0001869,1.47e-10,21;UBERON:0000203,1.47e-10,21;UBERON:0002619,1.44e-08,17;UBERON:0002021,2.80e-08,10;UBERON:0000411,2.80e-08,10;UBERON:0001950,2.80e-08,10 | |||
|phase1_expression=11.3705681444404,0,0,0,0,1.34303417529512,0.233612640595526,6.19791952519566,3.09735188733667,4.44722600011788,2.05461561870606,0.797721589953364,10.9568467155972,10.4904482902797,0.666219523631325,0.202475267389826,0,1.10411757875383,1.50825876966313,0.84877930359606,5.10259740906419,0.397163804803541,1.04479915655574,0.47997726838022,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,0.878744730937887,1.1665793944457,1.1198913730029,2.87505128729943,0.671130424230945,13.0565185562042,5.04140698713696,0.257259436035947,0.286533439938757,1.03134418455488,17.3992156339254,17.4567023159771,16.4796164911607,5.76035704517525,1.77858959222228,0.899899717281399,0.988866362566974,1.4209602298922,6.89080254192331,4.99483796918021,12.6501327016343,13.5005938331691,14.5124223332454,23.1377297367081,21.4242484723065,13.8414603112898,12.172374819316,13.7882817991503,8.8092704799511,18.2592893461818,15.6678663921368,15.9582408153535,14.6380229763855,13.022834263919,10.3297709630511,6.75315132038016,5.04234217663473,25.9273155216828,28.0472211174233,25.7231235238915,4.16494063332512,10.9578762154839,0,0,0,0,0,0,3.08977724289854,0.170430322578058,0.259786004602869,0,30.844708931093,0,0,0,0.216491041011214,0.253359865475099,1.51657333504435,2.16949371466214,0.258937883647172,5.49235914539852,5.55153045651635,6.39377504455497,2.30615497256059,4.22023393547343,3.64524992120685,1.38233250462643,0.247194967734374,0.144599356919912,0.884610551949874,1.7794353494215,0.883366073841574,1.45462575940567,1.86391761218122,56.7994746202401,51.104996462483,2.29911349687732,0.11981512450592,1.19980546198682,0.127070227073065,4.34392854273986,33.3975440057597,21.3612398591869,53.0164176586443,63.1617179605916,18.7009240103604,23.6872244078926,6.41587992256993,2.48813941220186,10.108910337347,1.26265113531884,7.67710613479952,12.644615743841,10.9837899181263,6.93242162044289,7.00775941258677,5.38077625196369,6.8402258928602,3.88055056108524,17.0298714416945,15.1284864134255,17.4191612922309,12.9325482132269,8.61946472599353,5.2237824978325,4.32142486456681,4.17971960318836,0,0,0,4.55676699578104,6.56672967947069,3.06105504483725,4.49814997611899,2.95146347621106,2.93107514486019,2.32533944750408,1.3413670069981,1.75148013550754,1.31647879930784,0.492502392237286,0.972825714550269,0.292399974850665,0.219550115291051,0.536825675041487,39.1139304329277,19.0373532901676,0,0.528901133327089,6.82522401712749,5.34144345279009,3.09281907173024,2.21851877085677,2.00140239460383,2.47293313946327,0,1.15289268306808,2.76468729680296,1.1937388322469,1.75467678407208,0,0.216138049874694,0.597423819763102,5.12103332573321,3.88444942873078,3.38123207019241,2.64746726198909,2.13347735884388,2.52488951605147,0.442655759869801,0,0,0.123397163921801,0,1.16791574001266,0.196558995113203,0,0,0.241177159752417,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0,0,0,3.14080423283228,10.6115190591471,3.09633455239849,2.54617628662782,1.64283173801951,1.50755631697634,2.61848004974615,1.75620283072019,1.7339865851681,2.43611158613652,2.87018583583477,0.81931657357869,2.24490476425664,1.59113964439663,0,0,0,0.275936746304732,8.50918126935297,4.80567915028033,0,0.757412781613119,7.2566890465739,9.37052986311932,12.2791336707695,11.9484398976276,14.704712489438,12.4553673547086,6.8817819284732,8.47541987942804,9.09161889277004,20.2432429345738,3.69044221541498,3.02711526234334,2.76907830901079,1.48473110675282,0,4.37005145078967,1.81394134178851,1.69744571780308,0.885905678642318,2.15204603560749,1.29214146584111,0.727067458955011,0,0.948110273807448,0,0,35.7461586041477,8.46287141947158,9.44318391614108,6.64444808597936,12.7684968222437,26.0418473699023,28.4669805641669,44.7563475198461,0,0,0.441056796109924,3.46261131177108,5.32832608096488,5.06628569396509,6.2073618881631,8.042904087508,0,7.23158677840988,1.02522528478712,1.44470807574256,0.185194527369712,0,0.683471138605126,0.457556346413045,0,0.139951452323658,0,0.954670618015114,8.22473583310952,2.64315307264903,2.26811215725783,2.50905955217362,2.40198820120795,1.61837215661785,1.57041565878138,1.04702376793612,0.648074866458964,0,1.69107881605257,5.98066184175915,5.95650565645551,7.19469396872976,8.52454834953025,9.12363077650202,6.10257640957921,7.55185432094911,5.97698263226552,1.20792060413003,0.288030006257865,5.37218905067903,9.52808511863772,6.26536838705446,1.94881234466693,5.01274747868948,4.56967115996909,5.7693815769585,4.72606486958647,4.03865799792591,4.87723562591999,3.83139503519994,5.84747284438514,5.67649865677944,6.42822961998629,1.36038230169127,0.443971906748129,0.0897138566094757,0.167884616364078,2.70465431645067,0.187682475451182,0,0.643105137237198,0.501572104035363,62.6874545304944,49.2548003062679,47.5503276154699,57.227109720448,54.8066015816514,57.4099362016172,55.3518450190081,49.5353323546642,48.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| 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| ||
|short_description=p1@Kcnmb4 | |short_description=p1@Kcnmb4 | ||
}} | }} |
Latest revision as of 15:15, 25 September 2015
Short description: | p1@Kcnmb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnmb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000068233_5end |
EntrezGene: | Kcnmb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.50e-15 | 33 |
neuronal stem cell | 5.50e-15 | 33 |
neuroblast | 5.50e-15 | 33 |
electrically signaling cell | 5.50e-15 | 33 |
ectodermal cell | 5.08e-12 | 44 |
neurectodermal cell | 5.08e-12 | 44 |
CNS neuron (sensu Vertebrata) | 1.81e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.81e-11 | 23 |
neural cell | 1.86e-11 | 43 |
electrically responsive cell | 5.60e-10 | 39 |
electrically active cell | 5.60e-10 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.49e-29 | 75 |
central nervous system | 3.62e-29 | 73 |
ectoderm-derived structure | 9.74e-29 | 95 |
ectoderm | 9.74e-29 | 95 |
presumptive ectoderm | 9.74e-29 | 95 |
neurectoderm | 4.21e-24 | 64 |
neural plate | 4.21e-24 | 64 |
presumptive neural plate | 4.21e-24 | 64 |
ecto-epithelium | 6.59e-24 | 73 |
regional part of nervous system | 1.07e-22 | 54 |
neural tube | 1.81e-21 | 52 |
neural rod | 1.81e-21 | 52 |
future spinal cord | 1.81e-21 | 52 |
neural keel | 1.81e-21 | 52 |
pre-chordal neural plate | 1.23e-19 | 49 |
regional part of forebrain | 1.22e-18 | 39 |
forebrain | 1.22e-18 | 39 |
future forebrain | 1.22e-18 | 39 |
brain | 1.23e-18 | 47 |
future brain | 1.23e-18 | 47 |
anterior neural tube | 1.78e-18 | 40 |
regional part of brain | 4.79e-18 | 46 |
structure with developmental contribution from neural crest | 3.91e-17 | 92 |
gray matter | 1.23e-16 | 34 |
brain grey matter | 1.25e-13 | 29 |
regional part of telencephalon | 1.25e-13 | 29 |
telencephalon | 1.25e-13 | 29 |
cerebral cortex | 1.47e-10 | 21 |
cerebral hemisphere | 1.47e-10 | 21 |
pallium | 1.47e-10 | 21 |
regional part of cerebral cortex | 1.44e-08 | 17 |
occipital lobe | 2.80e-08 | 10 |
visual cortex | 2.80e-08 | 10 |
neocortex | 2.80e-08 | 10 |