FFCP PHASE1:Mm9::chr10:109341008..109341022,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=260315 | |EntrezGene=260315 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1861 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENSMUST00000161798_5end | |association_with_transcript=56bp_to_ENSMUST00000161798_5end | ||
|cluster_id=chr10:109341008..109341022,- | |||
|description=CAGE_peak_3_at_Nav3_5end | |description=CAGE_peak_3_at_Nav3_5end | ||
|id=chr10:109341008..109341022,- | |id=chr10:109341008..109341022,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.58e-09,3;CL:0000359,5.58e-09,3;CL:0002539,5.58e-09,3;CL:0000514,5.58e-09,3;CL:0000680,1.23e-07,6;CL:0000187,1.23e-07,6;CL:0000056,1.23e-07,6;CL:0000217,5.86e-07,2;CL:0000328,5.86e-07,2;CL:0002573,5.86e-07,2;CL:0002376,5.86e-07,2;CL:0000218,5.86e-07,2;CL:0000692,5.86e-07,2;CL:0002377,5.86e-07,2;CL:0002375,5.86e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.59e-07!23 | |ontology_enrichment_uberon=UBERON:0003102!3.59e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.58e-09,3;UBERON:0004237,5.58e-09,3;UBERON:0004695,5.58e-09,3;UBERON:0002111,5.58e-09,3;UBERON:0004178,5.58e-09,3;UBERON:0005795,1.11e-07,4;UBERON:0000995,1.11e-07,4;UBERON:0001987,2.81e-07,2;UBERON:0003124,2.81e-07,2;UBERON:0004340,2.81e-07,2;UBERON:0000947,7.91e-07,4;UBERON:0001637,7.91e-07,4;UBERON:0004573,7.91e-07,4;UBERON:0003509,7.91e-07,4;UBERON:0004571,7.91e-07,4;UBERON:0010191,7.91e-07,4;UBERON:0004572,7.91e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.72340783073175,2.20256102594018,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,1.54355661621568,0.573066879877513,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74170244666323,2.11600368298999,0,0,0,0,0,0,0,1.02258193546835,1.55871602761721,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.776813650941515,0,0.520455980298408,0.913396434936424,0.230615497256059,0,0.23517741427141,0.251333182659351,0.247194967734374,0.289198713839823,0,1.94120219936891,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,2.78601733217733,1.4404749548556,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,1.16371492300575,1.1221731182451,2.02356918797623,1.03327103585722,0.784993639206874,0.740382983530803,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80328439914343,1.26235463602186,0.315508219416257,0,0.430846795465598,0.716906393857656,0.222798674082394,0.849229592366497,0.404810701674894,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,4.69343416127421,2.1183207086382,0,0.49465875882444,0.322928853391811,0.603129249281559,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0.167884616364078,0.772758376128762,3.75364950902364,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0.962757628775446,0.252697211763798,0.760437899670719,1.13175804831646,1.49826411951812,0.832326981263301,1.09127391015665,1.90517476513229,0.927074607558844,1.35036454324594,0,1.32479028120958,1.02860775715625,0.887379030796687,0.715308569841963,0.581385666529314,0.846984423737976,1.35383372626682,0.548783918618318,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.29551344712669,0.818462086339379,0.619747364743864,1.15743966588685,0.499621155875892,0.701794825336225,1.28922632428979,1.14772999241306,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.59992422793407,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.72340783073175,2.20256102594018,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,1.54355661621568,0.573066879877513,0,0,0,0,0,0,0,0.988866362566974,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74170244666323,2.11600368298999,0,0,0,0,0,0,0,1.02258193546835,1.55871602761721,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.776813650941515,0,0.520455980298408,0.913396434936424,0.230615497256059,0,0.23517741427141,0.251333182659351,0.247194967734374,0.289198713839823,0,1.94120219936891,0.662524555381181,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0.420883711772948,0,0.229902104433473,0.540186389416048,0.30140963567143,0.0680364991513279,0.12811372028485,0,0,0,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,2.78601733217733,1.4404749548556,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,1.16371492300575,1.1221731182451,2.02356918797623,1.03327103585722,0.784993639206874,0.740382983530803,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80328439914343,1.26235463602186,0.315508219416257,0,0.430846795465598,0.716906393857656,0.222798674082394,0.849229592366497,0.404810701674894,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,4.69343416127421,2.1183207086382,0,0.49465875882444,0.322928853391811,0.603129249281559,0.477489376012546,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0.167884616364078,0.772758376128762,3.75364950902364,0.549454872801795,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.209613162627982,0,0.44449345560323,0,0.962757628775446,0.252697211763798,0.760437899670719,1.13175804831646,1.49826411951812,0.832326981263301,1.09127391015665,1.90517476513229,0.927074607558844,1.35036454324594,0,1.32479028120958,1.02860775715625,0.887379030796687,0.715308569841963,0.581385666529314,0.846984423737976,1.35383372626682,0.548783918618318,0.526139422875686,0.679020569229309,1.68342681497322,0.355905054372522,0.29551344712669,0.818462086339379,0.619747364743864,1.15743966588685,0.499621155875892,0.701794825336225,1.28922632428979,1.14772999241306,0.220591419119515,0.231867835620421 | ||
|short_description=p3@Nav3 | |short_description=p3@Nav3 | ||
}} | }} |
Latest revision as of 14:14, 25 September 2015
Short description: | p3@Nav3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nav3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1861 |
Association with transcript: | 56bp_to_ENSMUST00000161798_5end |
EntrezGene: | Nav3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.58e-09 | 3 |
vascular associated smooth muscle cell | 5.58e-09 | 3 |
aortic smooth muscle cell | 5.58e-09 | 3 |
smooth muscle myoblast | 5.58e-09 | 3 |
muscle precursor cell | 1.23e-07 | 6 |
muscle cell | 1.23e-07 | 6 |
myoblast | 1.23e-07 | 6 |
insulating cell | 5.86e-07 | 2 |
myelin accumulating cell | 5.86e-07 | 2 |
Schwann cell | 5.86e-07 | 2 |
non-myelinating Schwann cell | 5.86e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 5.86e-07 | 2 |
terminal Schwann cell | 5.86e-07 | 2 |
immature Schwann cell | 5.86e-07 | 2 |
Schwann cell precursor | 5.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.58e-09 | 3 |
blood vessel smooth muscle | 5.58e-09 | 3 |
arterial system smooth muscle | 5.58e-09 | 3 |
artery smooth muscle tissue | 5.58e-09 | 3 |
aorta smooth muscle tissue | 5.58e-09 | 3 |
embryonic uterus | 1.11e-07 | 4 |
uterus | 1.11e-07 | 4 |
placenta | 2.81e-07 | 2 |
chorion | 2.81e-07 | 2 |
allantois | 2.81e-07 | 2 |
aorta | 7.91e-07 | 4 |
artery | 7.91e-07 | 4 |
systemic artery | 7.91e-07 | 4 |
arterial blood vessel | 7.91e-07 | 4 |
systemic arterial system | 7.91e-07 | 4 |
aortic system | 7.91e-07 | 4 |
arterial system | 7.91e-07 | 4 |