FFCP PHASE1:Mm9::chr2:35834246..35834262,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:35834246..35834262,+ | |||
|description=CAGE_peak_at_chr2:35834246..35834262,+ | |description=CAGE_peak_at_chr2:35834246..35834262,+ | ||
|id=chr2:35834246..35834262,+ | |id=chr2:35834246..35834262,+ | ||
|ontology_enrichment_celltype=CL:0000791!6.26e-08!9;CL:0000789!6.26e-08!9;CL:0002420!6.26e-08!9;CL:0002419!6.26e-08!9;CL:0000790!6.26e-08!9;CL:0000624!4.61e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.78e-16,32;CL:0002032,1.78e-16,32;CL:0000037,1.78e-16,32;CL:0000837,1.78e-16,32;CL:0000791,3.36e-14,9;CL:0000789,3.36e-14,9;CL:0002420,3.36e-14,9;CL:0002419,3.36e-14,9;CL:0000790,3.36e-14,9;CL:0000838,8.12e-14,12;CL:0000542,1.10e-12,13;CL:0000051,1.10e-12,13;CL:0002320,1.13e-12,46;CL:0000134,1.13e-12,46;CL:0000084,1.65e-11,11;CL:0000827,1.65e-11,11;CL:0000624,3.02e-11,8;CL:0000219,2.18e-10,54;CL:0000738,1.73e-09,17;CL:0002087,1.73e-09,17;CL:0002031,6.54e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.06e-08!10;UBERON:0000411!1.06e-08!10;UBERON:0001950!1.06e-08!10;UBERON:0000956!5.89e-08!21;UBERON:0001869!5.89e-08!21;UBERON:0000203!5.89e-08!21;UBERON:0002619!6.22e-08!17;UBERON:0002020!5.60e-07!34;UBERON:0002780!7.64e-07!39;UBERON:0001890!7.64e-07!39;UBERON:0006240!7.64e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.55e-20,10;UBERON:0000411,4.55e-20,10;UBERON:0001950,4.55e-20,10;UBERON:0002384,1.13e-12,46;UBERON:0000956,1.84e-11,21;UBERON:0001869,1.84e-11,21;UBERON:0000203,1.84e-11,21;UBERON:0002619,2.34e-11,17;UBERON:0003528,6.45e-08,29;UBERON:0002791,6.45e-08,29;UBERON:0001893,6.45e-08,29 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.934450562382103,1.42035655785734,4.50523910885334,5.14941957908386,0.34243593645101,0.398860794976682,1.71200729931206,0.961624426608971,0,0,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0,0,0,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,1.00669563634642,2.17608642603403,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0,0.579728977403356,0,12.2394840067395,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,2.63593273913025,2.99951365496704,2.66847476853436,0,0.915001205637253,0.251308704225729,1.91206752211504,2.04572365864264,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,1.40442637462647,2.57347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.324275238183423,0,0.878200461164203,0.536825675041487,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,1.39951452323658,0.967399816630967,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,1.84130094602871,1.14579102687879,1.3748254587495,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0,0,0,0.771626443924566,0.499621155875892,0,0.214871054048298,0.956441660344217,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.934450562382103,1.42035655785734,4.50523910885334,5.14941957908386,0.34243593645101,0.398860794976682,1.71200729931206,0.961624426608971,0,0,0,0.157731082679119,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0,0,0,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0.523523743973798,1.17646297606203,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0.139986421625363,0,1.00669563634642,2.17608642603403,2.68875039313971,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.427115042397309,0.186399445825301,0.151452386666368,0,0.579728977403356,0,12.2394840067395,0.539703191637817,0,0,0.421333260395256,0,0,0,0,0,0,0,0.432982082022428,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.441683036920787,0,0,0,0.209446706813455,0,2.63593273913025,2.99951365496704,2.66847476853436,0,0.915001205637253,0.251308704225729,1.91206752211504,2.04572365864264,0.20778804455956,0.486723789203273,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0,1.40442637462647,2.57347907114715,0.852490498186778,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.329119699826961,0.32833492815819,0.324275238183423,0,0.878200461164203,0.536825675041487,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0,0,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0.972811360650212,0.274561413188081,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0.395287777946524,0.963963949265421,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.469343416127421,0,0,0,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.339956859987711,1.39951452323658,0.967399816630967,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0.302899349844443,0,0.201652370273681,0,0,0.116876902181569,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,1.84130094602871,1.14579102687879,1.3748254587495,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0,0,0,0.771626443924566,0.499621155875892,0,0.214871054048298,0.956441660344217,0,0 | ||
|short_description=p@chr2:35834246..35834262,+ | |short_description=p@chr2:35834246..35834262,+ | ||
}} | }} |
Latest revision as of 03:16, 5 August 2015
Short description: | p@chr2:35834246..35834262, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:35834246..35834262, + |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.78e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.78e-16 | 32 |
hematopoietic stem cell | 1.78e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.78e-16 | 32 |
mature alpha-beta T cell | 3.36e-14 | 9 |
alpha-beta T cell | 3.36e-14 | 9 |
immature T cell | 3.36e-14 | 9 |
mature T cell | 3.36e-14 | 9 |
immature alpha-beta T cell | 3.36e-14 | 9 |
lymphoid lineage restricted progenitor cell | 8.12e-14 | 12 |
lymphocyte | 1.10e-12 | 13 |
common lymphoid progenitor | 1.10e-12 | 13 |
connective tissue cell | 1.13e-12 | 46 |
mesenchymal cell | 1.13e-12 | 46 |
T cell | 1.65e-11 | 11 |
pro-T cell | 1.65e-11 | 11 |
CD4-positive, alpha-beta T cell | 3.02e-11 | 8 |
motile cell | 2.18e-10 | 54 |
leukocyte | 1.73e-09 | 17 |
nongranular leukocyte | 1.73e-09 | 17 |
hematopoietic lineage restricted progenitor cell | 6.54e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.55e-20 | 10 |
visual cortex | 4.55e-20 | 10 |
neocortex | 4.55e-20 | 10 |
connective tissue | 1.13e-12 | 46 |
cerebral cortex | 1.84e-11 | 21 |
cerebral hemisphere | 1.84e-11 | 21 |
pallium | 1.84e-11 | 21 |
regional part of cerebral cortex | 2.34e-11 | 17 |
brain grey matter | 6.45e-08 | 29 |
regional part of telencephalon | 6.45e-08 | 29 |
telencephalon | 6.45e-08 | 29 |