FFCP PHASE1:Hg19::chr12:53242592..53242631,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196374 | |EntrezGene=196374 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28926 | |HGNC=28926 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ49 | |UniProt=B4DQ49 | ||
|association_with_transcript=143bp_to_ENST00000539860_5end | |association_with_transcript=143bp_to_ENST00000539860_5end | ||
|cluster_id=chr12:53242592..53242631,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_4_at_KRT78_5end | |description=CAGE_peak_4_at_KRT78_5end | ||
|id=chr12:53242592..53242631,- | |id=chr12:53242592..53242631,- | ||
|ontology_enrichment_celltype=CL:0002623!3.56e-27!3;CL:0000622!9.55e-17!5;CL:0000154!3.97e-14!6;CL:0000150!9.65e-10!9;CL:0002541!8.29e-08!3 | |ontology_enrichment_celltype=CL:0002623!3.56e-27!3;CL:0000622!9.55e-17!5;CL:0000154!3.97e-14!6;CL:0000150!9.65e-10!9;CL:0002541!8.29e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.04e-34;2!UBERON:0010056;7.04e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.06e-27!3;UBERON:0001033!1.06e-27!3;UBERON:0010056!1.06e-27!3;UBERON:0000078!1.16e-27!18;UBERON:0000166!9.40e-24!21;UBERON:0002372!4.22e-21!1;UBERON:0001961!4.22e-21!1;UBERON:0001744!4.22e-21!1;UBERON:0001735!4.22e-21!1;UBERON:0000989!5.16e-21!1;UBERON:0008811!5.16e-21!1;UBERON:0006258!5.16e-21!1;UBERON:0005876!5.16e-21!1;UBERON:0004874!5.16e-21!1;UBERON:0001042!1.21e-18!10;UBERON:0009145!1.21e-18!10;UBERON:0000165!7.07e-18!28;UBERON:0000930!7.07e-18!28;UBERON:0006562!5.12e-17!11;UBERON:0000161!2.43e-14!35;UBERON:0001044!3.97e-14!6;UBERON:0003293!3.97e-14!6;UBERON:0003294!3.97e-14!6;UBERON:0010047!3.97e-14!6;UBERON:0000167!3.97e-14!6;UBERON:0000341!1.82e-11!2;UBERON:0001444!1.71e-10!48;UBERON:0001557!3.92e-10!19;UBERON:0003408!7.36e-09!10;UBERON:0000476!8.29e-08!3;UBERON:0000920!8.29e-08!3;UBERON:0001041!3.21e-07!98;UBERON:0001004!5.13e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.22e-87;3!UBERON:0001033;1.22e-87;3!UBERON:0000341;4.27e-34;2!UBERON:0000020;1.36e-12;23!UBERON:0000974;2.31e-12;6!UBERON:0001032;4.08e-12;24!UBERON:0004456;4.08e-12;24!UBERON:0000165;1.50e-10;28!UBERON:0000153;1.63e-07;54!UBERON:0007811;4.13e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.52e-87,3;UBERON:0001033,1.52e-87,3;UBERON:0010056,1.52e-87,3;UBERON:0000341,3.61e-34,2;UBERON:0001042,2.72e-27,10;UBERON:0009145,2.72e-27,10;UBERON:0006562,6.20e-25,11;UBERON:0008814,9.75e-16,18;UBERON:0001557,5.66e-15,19;UBERON:0000166,4.26e-13,22;UBERON:0000020,4.20e-12,24;UBERON:0001032,4.20e-12,24;UBERON:0004456,4.20e-12,24;UBERON:0000153,1.22e-10,62;UBERON:0007811,1.22e-10,62;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000161,1.92e-08,36;UBERON:0000974,5.73e-08,10 | |||
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|short_description=p4@KRT78 | |short_description=p4@KRT78 | ||
}} | }} |
Latest revision as of 00:56, 19 September 2015
Short description: | p4@KRT78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT78_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 143bp_to_ENST00000539860_5end |
EntrezGene: | KRT78 |
HGNC: | 28926 |
UniProt: | B4DQ49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.52e-87 | 3 |
gustatory system | 1.52e-87 | 3 |
future tongue | 1.52e-87 | 3 |
throat | 3.61e-34 | 2 |
chordate pharynx | 2.72e-27 | 10 |
pharyngeal region of foregut | 2.72e-27 | 10 |
pharynx | 6.20e-25 | 11 |
pharyngeal arch system | 9.75e-16 | 18 |
upper respiratory tract | 5.66e-15 | 19 |
oral opening | 4.26e-13 | 22 |
sense organ | 4.20e-12 | 24 |
sensory system | 4.20e-12 | 24 |
entire sense organ system | 4.20e-12 | 24 |
anterior region of body | 1.22e-10 | 62 |
craniocervical region | 1.22e-10 | 62 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
orifice | 1.92e-08 | 36 |
neck | 5.73e-08 | 10 |