FFCP PHASE1:Hg19::chr12:52405627..52405641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52405627..52405641,+ | |||
|coexpression_cluster_id=C104 | |||
|description=CAGE_peak_at_chr12:52405627..52405641,+ | |description=CAGE_peak_at_chr12:52405627..52405641,+ | ||
|id=chr12:52405627..52405641,+ | |id=chr12:52405627..52405641,+ | ||
|ontology_enrichment_celltype=CL:0000842!2.36e-18!3;CL:0000224!6.68e-14!4;CL:0002274!1.24e-11!5;CL:0000457!1.24e-11!5;CL:0002191!1.24e-11!5;CL:0000097!1.24e-11!5;CL:0000831!1.24e-11!5;CL:0002028!1.24e-11!5;CL:0000738!5.98e-11!140;CL:0000080!1.99e-09!6;CL:0000767!1.10e-08!3;CL:0000037!3.45e-08!172;CL:0000566!3.45e-08!172;CL:0000988!1.58e-07!182 | |ontology_enrichment_celltype=CL:0000842!2.36e-18!3;CL:0000224!6.68e-14!4;CL:0002274!1.24e-11!5;CL:0000457!1.24e-11!5;CL:0002191!1.24e-11!5;CL:0000097!1.24e-11!5;CL:0000831!1.24e-11!5;CL:0002028!1.24e-11!5;CL:0000738!5.98e-11!140;CL:0000080!1.99e-09!6;CL:0000767!1.10e-08!3;CL:0000037!3.45e-08!172;CL:0000566!3.45e-08!172;CL:0000988!1.58e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.05e-32;5!CL:0002593;5.69e-21;2!CL:0000163;1.03e-18;9!CL:0000236;3.64e-13;13!CL:0002595;3.22e-09;5!CL:0000945;1.36e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.05e-32,5;CL:0002028,1.05e-32,5;CL:0002593,6.96e-21,2;CL:0000163,1.03e-18,9;CL:0000236,2.51e-12,14;CL:0002595,3.49e-09,5;CL:0000945,1.31e-07,24;CL:0000826,1.31e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!4.57e-07!1;DOID:326!4.57e-07!1;DOID:3978!4.57e-07!1;DOID:3394!4.57e-07!1;DOID:5844!4.57e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002084!2.52e-07!1;UBERON:0002082!2.52e-07!1;UBERON:0004706!2.52e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.69e-21;2!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.96e-21,2;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0003513,6.39e-07,7 | |||
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|short_description=p@chr12:52405627..52405641,+ | |short_description=p@chr12:52405627..52405641,+ | ||
}} | }} |
Latest revision as of 09:25, 24 July 2015
Short description: | p@chr12:52405627..52405641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52405627..52405641, + |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.05e-32 | 5 |
basophil mast progenitor cell | 1.05e-32 | 5 |
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
endocrine cell | 1.03e-18 | 9 |
B cell | 2.51e-12 | 14 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
lymphocyte of B lineage | 1.31e-07 | 24 |
pro-B cell | 1.31e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 6.96e-21 | 2 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
trunk blood vessel | 6.39e-07 | 7 |