FFCP PHASE1:Hg19::chr12:49582787..49582816,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20766 | |HGNC=20766 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000550254_5end | |association_with_transcript=-3bp_to_ENST00000550254_5end | ||
|cluster_id=chr12:49582787..49582816,- | |||
|description=CAGE_peak_2_at_TUBA1A_5end | |description=CAGE_peak_2_at_TUBA1A_5end | ||
|id=chr12:49582787..49582816,- | |id=chr12:49582787..49582816,- | ||
|ontology_enrichment_celltype=CL:0000791!3.23e-07!18;CL:0000789!3.23e-07!18;CL:0002420!3.23e-07!18;CL:0002419!3.23e-07!18;CL:0000790!3.23e-07!18;CL:0000034!4.29e-07!444;CL:0000084!4.56e-07!25;CL:0000827!4.56e-07!25 | |ontology_enrichment_celltype=CL:0000791!3.23e-07!18;CL:0000789!3.23e-07!18;CL:0002420!3.23e-07!18;CL:0002419!3.23e-07!18;CL:0000790!3.23e-07!18;CL:0000034!4.29e-07!444;CL:0000084!4.56e-07!25;CL:0000827!4.56e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.00e-07;18!CL:0000789;3.00e-07;18!CL:0002419;3.00e-07;18!CL:0000084;4.47e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.01e-07,441;CL:0000791,3.23e-07,18;CL:0000789,3.23e-07,18;CL:0002420,3.23e-07,18;CL:0002419,3.23e-07,18;CL:0000790,3.23e-07,18;CL:0000084,4.55e-07,25;CL:0000827,4.55e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.00e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.73e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.22e-08,203;UBERON:0000926,7.62e-07,315;UBERON:0004120,7.62e-07,315;UBERON:0006603,7.62e-07,315 | |||
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| ||
|short_description=p2@TUBA1A | |short_description=p2@TUBA1A | ||
}} | }} |
Latest revision as of 15:56, 18 September 2015
Short description: | p2@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBA1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000550254_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.01e-07 | 441 |
mature alpha-beta T cell | 3.23e-07 | 18 |
alpha-beta T cell | 3.23e-07 | 18 |
immature T cell | 3.23e-07 | 18 |
mature T cell | 3.23e-07 | 18 |
immature alpha-beta T cell | 3.23e-07 | 18 |
T cell | 4.55e-07 | 25 |
pro-T cell | 4.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.22e-08 | 203 |
mesoderm | 7.62e-07 | 315 |
mesoderm-derived structure | 7.62e-07 | 315 |
presumptive mesoderm | 7.62e-07 | 315 |