FFCP PHASE1:Mm9::chr2:24831369..24831377,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:24831369..24831377,- | |||
|description=CAGE_peak_at_chr2:24831369..24831377,- | |description=CAGE_peak_at_chr2:24831369..24831377,- | ||
|id=chr2:24831369..24831377,- | |id=chr2:24831369..24831377,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,8.42e-10,1;CL:0000792,8.42e-10,1;CL:0000355,1.37e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.06e-27,3;DOID:4045,2.06e-27,3;DOID:0050686,6.39e-24,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.37e-09,9;UBERON:0002036,1.37e-09,9;UBERON:0002385,1.37e-09,9;UBERON:0000486,1.37e-09,9;UBERON:0007503,1.37e-09,9;UBERON:0001015,1.37e-09,9;UBERON:0002329,1.37e-09,9;UBERON:0003082,1.37e-09,9;UBERON:0003059,1.37e-09,9;UBERON:0007282,1.37e-09,9;UBERON:0004290,1.37e-09,9;UBERON:0009618,1.37e-09,9;UBERON:0000383,1.09e-08,10;UBERON:0007524,5.99e-08,11;UBERON:0003077,5.99e-08,11;UBERON:0007285,5.99e-08,11 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,1.16210991097419,0.281577444303333,0.234064526321993,0,0,1.54080656938085,0.34968160967599,0,0,0.699561878128147,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0,0,0.288851619751275,0,0,5.4409111995798,3.1253413780952,3.66466620781659,19.4116391050235,3.41522742479223,3.39857247121808,0,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0.11981512450592,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0.648540907100142,0,0,0,0,0,0,0.964887042726734,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.645857706783622,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.69975726161829,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0.765153328275374,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,1.16210991097419,0.281577444303333,0.234064526321993,0,0,1.54080656938085,0.34968160967599,0,0,0.699561878128147,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,0,0,0.288851619751275,0,0,5.4409111995798,3.1253413780952,3.66466620781659,19.4116391050235,3.41522742479223,3.39857247121808,0,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0.11981512450592,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0.648540907100142,0,0,0,0,0,0,0.964887042726734,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0,0.645857706783622,0,0,0.164140899745061,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0.69975726161829,0.138199973804424,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0,0,0.765153328275374,0,0 | ||
|short_description=p@chr2:24831369..24831377,- | |short_description=p@chr2:24831369..24831377,- | ||
}} | }} |
Latest revision as of 20:11, 4 August 2015
Short description: | p@chr2:24831369..24831377, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:24831369..24831377, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 8.42e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.42e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.37e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.37e-09 | 9 |
striated muscle tissue | 1.37e-09 | 9 |
muscle tissue | 1.37e-09 | 9 |
multilaminar epithelium | 1.37e-09 | 9 |
epithelial vesicle | 1.37e-09 | 9 |
musculature | 1.37e-09 | 9 |
somite | 1.37e-09 | 9 |
myotome | 1.37e-09 | 9 |
presomitic mesoderm | 1.37e-09 | 9 |
presumptive segmental plate | 1.37e-09 | 9 |
dermomyotome | 1.37e-09 | 9 |
trunk paraxial mesoderm | 1.37e-09 | 9 |
musculature of body | 1.09e-08 | 10 |
dense mesenchyme tissue | 5.99e-08 | 11 |
paraxial mesoderm | 5.99e-08 | 11 |
presumptive paraxial mesoderm | 5.99e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.06e-27 | 3 |
muscle cancer | 2.06e-27 | 3 |
organ system cancer | 6.39e-24 | 6 |