FFCP PHASE1:Mm9::chr18:60783958..60784005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=104027 | |EntrezGene=104027 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1167 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CC35,Q3TY32,Q3U336 | |UniProt=Q8CC35,Q3TY32,Q3U336 | ||
|association_with_transcript=0bp_to_ENSMUST00000097566,NM_177340,uc008fap.2,uc008fas.2_5end | |association_with_transcript=0bp_to_ENSMUST00000097566,NM_177340,uc008fap.2,uc008fas.2_5end | ||
|cluster_id=chr18:60783958..60784005,- | |||
|description=CAGE_peak_3_at_Synpo_5end | |description=CAGE_peak_3_at_Synpo_5end | ||
|id=chr18:60783958..60784005,- | |id=chr18:60783958..60784005,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.88e-11!102;UBERON:0000924!7.88e-11!102;UBERON:0006601!7.88e-11!102;UBERON:0001017!2.86e-09!73;UBERON:0005743!2.86e-09!73;UBERON:0000073!5.36e-09!75;UBERON:0001016!5.36e-09!75;UBERON:0002021!1.55e-07!10;UBERON:0000411!1.55e-07!10;UBERON:0001950!1.55e-07!10;UBERON:0000955!5.24e-07!50;UBERON:0006238!5.24e-07!50;UBERON:0002619!7.23e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.12e-09,95;UBERON:0000924,6.12e-09,95;UBERON:0006601,6.12e-09,95;UBERON:0010314,6.50e-09,92;UBERON:0001017,2.27e-08,73;UBERON:0001016,4.26e-08,75;UBERON:0002021,1.14e-07,10;UBERON:0000411,1.14e-07,10;UBERON:0001950,1.14e-07,10 | |||
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| ||
|short_description=p3@Synpo | |short_description=p3@Synpo | ||
}} | }} |
Latest revision as of 13:16, 1 October 2015
Short description: | p3@Synpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Synpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:1167 |
Association with transcript: | 0bp_to_ENSMUST00000097566, NM_177340, uc008fap.2, uc008fas.2_5end |
EntrezGene: | Synpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.12e-09 | 95 |
ectoderm | 6.12e-09 | 95 |
presumptive ectoderm | 6.12e-09 | 95 |
structure with developmental contribution from neural crest | 6.50e-09 | 92 |
central nervous system | 2.27e-08 | 73 |
nervous system | 4.26e-08 | 75 |
occipital lobe | 1.14e-07 | 10 |
visual cortex | 1.14e-07 | 10 |
neocortex | 1.14e-07 | 10 |