FFCP PHASE1:Hg19::chr12:47785388..47785433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:47785388..47785433,- | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr12:47785388..47785433,- | |description=CAGE_peak_at_chr12:47785388..47785433,- | ||
|id=chr12:47785388..47785433,- | |id=chr12:47785388..47785433,- | ||
|ontology_enrichment_celltype=CL:0000738!1.04e-25!140;CL:0000988!2.26e-22!182;CL:0002087!1.70e-21!119;CL:0000838!2.43e-20!52;CL:0000542!7.04e-20!53;CL:0000051!7.04e-20!53;CL:0000037!1.55e-19!172;CL:0000566!1.55e-19!172;CL:0000624!6.74e-18!6;CL:0002032!1.02e-17!165;CL:0000837!1.02e-17!165;CL:0000080!3.35e-17!6;CL:0002031!4.32e-17!124;CL:0000084!8.66e-16!25;CL:0000827!8.66e-16!25;CL:0000623!1.09e-14!3;CL:0000825!1.09e-14!3;CL:0000791!1.75e-14!18;CL:0000789!1.75e-14!18;CL:0002420!1.75e-14!18;CL:0002419!1.75e-14!18;CL:0000790!1.75e-14!18;CL:0000767!1.16e-13!3;CL:0000081!1.01e-09!11;CL:0000094!6.18e-09!8 | |ontology_enrichment_celltype=CL:0000738!1.04e-25!140;CL:0000988!2.26e-22!182;CL:0002087!1.70e-21!119;CL:0000838!2.43e-20!52;CL:0000542!7.04e-20!53;CL:0000051!7.04e-20!53;CL:0000037!1.55e-19!172;CL:0000566!1.55e-19!172;CL:0000624!6.74e-18!6;CL:0002032!1.02e-17!165;CL:0000837!1.02e-17!165;CL:0000080!3.35e-17!6;CL:0002031!4.32e-17!124;CL:0000084!8.66e-16!25;CL:0000827!8.66e-16!25;CL:0000623!1.09e-14!3;CL:0000825!1.09e-14!3;CL:0000791!1.75e-14!18;CL:0000789!1.75e-14!18;CL:0002420!1.75e-14!18;CL:0002419!1.75e-14!18;CL:0000790!1.75e-14!18;CL:0000767!1.16e-13!3;CL:0000081!1.01e-09!11;CL:0000094!6.18e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000623;5.18e-44;3!CL:0000084;3.72e-20;25!CL:0000791;9.40e-20;18!CL:0000789;9.40e-20;18!CL:0002419;9.40e-20;18!CL:0000542;1.80e-14;53!CL:0000625;2.13e-12;11!CL:0000624;2.64e-10;6!CL:0000094;5.96e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,4.49e-44,3;CL:0000825,4.49e-44,3;CL:0000838,1.88e-26,52;CL:0000542,6.17e-26,53;CL:0000051,6.17e-26,53;CL:0000084,3.37e-20,25;CL:0000827,3.37e-20,25;CL:0000791,9.40e-20,18;CL:0000789,9.40e-20,18;CL:0002420,9.40e-20,18;CL:0002419,9.40e-20,18;CL:0000790,9.40e-20,18;CL:0000738,2.86e-16,136;CL:0002087,9.26e-14,115;CL:0000037,6.11e-13,168;CL:0000625,2.21e-12,11;CL:0000988,3.22e-12,177;CL:0002032,2.01e-11,161;CL:0000837,2.01e-11,161;CL:0002031,8.50e-11,120;CL:0000624,2.52e-10,6;CL:0000094,6.40e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;9.40e-20;18!CL:0000051;1.80e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.38e-15;1!DOID:0060061;2.38e-15;1!DOID:8691;2.38e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.54e-15,1;DOID:0060061,1.54e-15,1;DOID:8691,1.54e-15,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:47785388..47785433,- | |short_description=p@chr12:47785388..47785433,- | ||
}} | }} |
Latest revision as of 08:47, 24 July 2015
Short description: | p@chr12:47785388..47785433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47785388..47785433, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 4.49e-44 | 3 |
pro-NK cell | 4.49e-44 | 3 |
lymphoid lineage restricted progenitor cell | 1.88e-26 | 52 |
lymphocyte | 6.17e-26 | 53 |
common lymphoid progenitor | 6.17e-26 | 53 |
T cell | 3.37e-20 | 25 |
pro-T cell | 3.37e-20 | 25 |
mature alpha-beta T cell | 9.40e-20 | 18 |
alpha-beta T cell | 9.40e-20 | 18 |
immature T cell | 9.40e-20 | 18 |
mature T cell | 9.40e-20 | 18 |
immature alpha-beta T cell | 9.40e-20 | 18 |
leukocyte | 2.86e-16 | 136 |
nongranular leukocyte | 9.26e-14 | 115 |
hematopoietic stem cell | 6.11e-13 | 168 |
CD8-positive, alpha-beta T cell | 2.21e-12 | 11 |
hematopoietic cell | 3.22e-12 | 177 |
hematopoietic oligopotent progenitor cell | 2.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 8.50e-11 | 120 |
CD4-positive, alpha-beta T cell | 2.52e-10 | 6 |
granulocyte | 6.40e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.54e-15 | 1 |
cutaneous T cell lymphoma | 1.54e-15 | 1 |
mycosis fungoides | 1.54e-15 | 1 |