FFCP PHASE1:Hg19::chr12:45270077..45270143,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4753 | |EntrezGene=4753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |HGNC=7751 | ||
|TSSclassifier=strong | |||
|UniProt=Q99435,F5H5N4,Q96JS2,F8VVB6 | |UniProt=Q99435,F5H5N4,Q96JS2,F8VVB6 | ||
|association_with_transcript=0bp_to_ENST00000452445,ENST00000543684,ENST00000547751,ENST00000549027,ENST00000551601_5end | |association_with_transcript=0bp_to_ENST00000452445,ENST00000543684,ENST00000547751,ENST00000549027,ENST00000551601_5end | ||
|cluster_id=chr12:45270077..45270143,- | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_1_at_NELL2_5end | |description=CAGE_peak_1_at_NELL2_5end | ||
|id=chr12:45270077..45270143,- | |id=chr12:45270077..45270143,- | ||
|ontology_enrichment_celltype=CL:0000791!1.81e-10!18;CL:0000789!1.81e-10!18;CL:0002420!1.81e-10!18;CL:0002419!1.81e-10!18;CL:0000790!1.81e-10!18;CL:0000625!8.36e-09!11 | |ontology_enrichment_celltype=CL:0000791!1.81e-10!18;CL:0000789!1.81e-10!18;CL:0002420!1.81e-10!18;CL:0002419!1.81e-10!18;CL:0000790!1.81e-10!18;CL:0000625!8.36e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.67e-13;18!CL:0000789;3.67e-13;18!CL:0002419;3.67e-13;18!CL:0000625;7.84e-11;11!CL:0000084;1.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.21e-13,18;CL:0000789,3.21e-13,18;CL:0002420,3.21e-13,18;CL:0002419,3.21e-13,18;CL:0000790,3.21e-13,18;CL:0000625,7.92e-11,11;CL:0000084,9.47e-08,25;CL:0000827,9.47e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;3.67e-13;18!UBERON:0006601;8.01e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;7.93e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.36e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-37!115;UBERON:0000073!2.82e-35!94;UBERON:0001016!2.82e-35!94;UBERON:0005743!8.45e-34!86;UBERON:0001017!7.28e-32!82;UBERON:0001049!4.94e-31!57;UBERON:0005068!4.94e-31!57;UBERON:0006241!4.94e-31!57;UBERON:0007135!4.94e-31!57;UBERON:0002346!3.98e-29!90;UBERON:0003075!5.86e-27!86;UBERON:0007284!5.86e-27!86;UBERON:0002616!1.13e-26!59;UBERON:0002780!6.44e-26!41;UBERON:0001890!6.44e-26!41;UBERON:0006240!6.44e-26!41;UBERON:0003080!7.73e-26!42;UBERON:0000955!1.79e-25!69;UBERON:0006238!1.79e-25!69;UBERON:0003056!8.10e-24!61;UBERON:0001893!3.27e-22!34;UBERON:0002020!5.62e-22!34;UBERON:0003528!5.62e-22!34;UBERON:0001869!1.16e-21!32;UBERON:0002791!1.77e-21!33;UBERON:0000924!1.41e-20!173;UBERON:0006601!1.41e-20!173;UBERON:0004121!7.11e-19!169;UBERON:0000153!3.10e-18!129;UBERON:0007811!3.10e-18!129;UBERON:0002619!4.10e-18!22;UBERON:0000956!9.65e-18!25;UBERON:0000203!9.65e-18!25;UBERON:0000033!4.78e-17!123;UBERON:0001950!1.04e-16!20;UBERON:0001871!3.22e-07!7;UBERON:0000178!5.08e-07!15;UBERON:0000179!5.08e-07!15;UBERON:0000463!5.08e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.42e-23;22!UBERON:0001869;1.01e-22;32!UBERON:0001893;2.76e-22;34!UBERON:0002780;3.89e-22;41!UBERON:0001890;3.89e-22;41!UBERON:0003528;4.02e-22;34!UBERON:0002020;4.02e-22;34!UBERON:0002791;4.08e-22;32!UBERON:0001950;5.94e-21;20!UBERON:0000073;6.04e-21;53!UBERON:0002616;6.04e-21;53!UBERON:0000956;2.87e-20;25!UBERON:0000203;2.87e-20;25!UBERON:0001017;8.81e-14;75!UBERON:0000955;1.51e-13;68!UBERON:0001016;3.37e-13;83!UBERON:0007023;2.46e-11;114!UBERON:0000922;3.28e-08;49!UBERON:0001871;6.43e-08;6!UBERON:0002420;1.28e-07;9!UBERON:0007245;1.28e-07;9!UBERON:0010009;1.28e-07;9!UBERON:0010011;1.28e-07;9!UBERON:0000454;1.28e-07;9!UBERON:0000200;4.63e-07;6!UBERON:0004732;5.08e-07;13!UBERON:0000125;5.95e-07;9!UBERON:0002308;5.95e-07;9!UBERON:0004733;7.61e-07;12!UBERON:0002028;7.61e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.86e-40,114;UBERON:0001016,7.05e-39,89;UBERON:0001049,9.43e-38,56;UBERON:0005068,9.43e-38,56;UBERON:0006241,9.43e-38,56;UBERON:0007135,9.43e-38,56;UBERON:0001017,3.57e-37,81;UBERON:0000073,2.56e-36,53;UBERON:0002616,2.56e-36,53;UBERON:0002346,3.59e-34,86;UBERON:0003075,1.96e-31,82;UBERON:0007284,1.96e-31,82;UBERON:0002780,8.64e-31,41;UBERON:0001890,8.64e-31,41;UBERON:0003080,8.64e-31,41;UBERON:0006240,8.64e-31,41;UBERON:0000955,4.08e-29,68;UBERON:0006238,4.08e-29,68;UBERON:0003056,1.45e-28,61;UBERON:0001893,4.91e-26,34;UBERON:0003528,9.59e-26,34;UBERON:0002020,9.59e-26,34;UBERON:0001869,2.67e-25,32;UBERON:0002791,1.49e-24,32;UBERON:0010371,3.81e-23,104;UBERON:0004121,5.13e-23,171;UBERON:0000924,5.13e-23,171;UBERON:0006601,5.13e-23,171;UBERON:0002619,9.64e-23,22;UBERON:0001950,6.07e-21,20;UBERON:0000956,2.83e-20,25;UBERON:0000203,2.83e-20,25;UBERON:0011216,5.60e-18,223;UBERON:0010314,2.23e-16,132;UBERON:0003076,3.01e-08,15;UBERON:0003057,3.01e-08,15;UBERON:0001871,6.55e-08,6;UBERON:0002420,1.34e-07,9;UBERON:0007245,1.34e-07,9;UBERON:0010009,1.34e-07,9;UBERON:0010011,1.34e-07,9;UBERON:0000454,1.34e-07,9;UBERON:0004732,4.38e-07,13;UBERON:0000200,4.62e-07,6;UBERON:0000125,6.22e-07,9;UBERON:0002308,6.22e-07,9;UBERON:0004733,6.66e-07,12;UBERON:0002028,6.66e-07,12;UBERON:0007277,6.66e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,2.21617904538218,0,1.88072832886853,2.57612388417951,0.547497700291537,0.502170558379211,0,0,0,10.2274711980715,4.60595277716655,5.41856431606266,0,0,0,12.3947520928483,0,0,6.64794490238253,9.6261334785668,15.1907609501096,0.895661896959697,6.15397965436061,0.257575567634187,0.581592955118259,1.13362783106643,0.485168122375632,0,2.46700732813095,0.929119112685311,0,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,0,0.188242339542605,1.09162460023138,0.224723484445085,0.918251677112708,1.28371610830437,0.639337125799041,0,1.19678194572979,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,0,0.521482918420201,0.868755378820466,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0.587237189370939,1.14681968437569,0,13.4522055115569,0,148.712586206058,87.2483893303146,42.9707132908974,0,4.23698946623668,1.4203434172042,0,0.334231370655521,1.76763544484902,1.55073726208535,0.270803863765016,0.128091319725675,0.130059347559878,17.1015420787823,10.5013006758622,30.7191270879156,149.324569104195,124.674025889806,89.90055047228,4.98561107869291,57.8662945338901,53.2622540498076,57.4354700884271,73.2700452945423,95.7092677168935,96.9461085337342,95.9163508525413,100.21351653391,82.4542795245483,56.352985986476,63.2268557629206,132.858843785099,90.3947861748255,182.189100084561,0,0,0,0,0,0,0,0,4.44313640671119,5.5432349365641,11.5063569257995,16.8963007392049,0,0,0.97364218096405,0.522389211897802,0.531831842075461,0.476981248610684,0,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.549605231791222,3.9534125230819,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.352303495931295,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2225029152362,18.8192271016509,16.6157338303411,13.3722760969828,11.8590799911545,13.8691396448815,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,8.0636870840307,1.97550513735526,0,0,0,0,0,1.44331342025273,11.0133884726323,6.69229557144183,0,0,0,0.790204397959275,2.57545848628462,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,1.97065295158377,2.46535615237033,1.65862492432618,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.672786506072164,0.87192013766656,1.0267360014933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0,0,0,39.9972443209912,36.0098050015394,40.5563994644005,1.77866236955724,100.207687470369,52.5836392688833,87.9460393005331,60.6041814070505,0.749007023947182,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,63.4777840197264,49.8299803891005,42.6910231213777,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0.924184045252977,0.784349769176855,0,0.844413031143006,0,0,0.215915916102139,0,0,0,0,0,0,0,0,23.8498616358242,5.24823433119529,20.8242172585154,1.23649213977267,0,0,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0.307007349452259,0,0,0.435050081742686,0.340906509664404,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,1.14729081763241,0,0,0,0.422215270595328,0,0,0.349934720244983,0,1.34060455107157,0,0.847294206991012,0,0,0,0,18.7755615415903,19.1159301785594,15.3804740537024,28.3495812794769,23.0362872928269,11.0240462902762,19.4411317405721,8.72437693923697,0,15.3996776842137,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,1.67043704337145,0,0,0,0,0,0.586032717087576,1.69904730449319,0.111443384277478,0.852408440419239,0,0.593929361665277,0,192.864643666662,105.502062307885,1.00177834520615,0,0.422250816255987,2.19172787076177,12.4327761989016,1.25966373927138,0,0,0,0,0,0,1.97286811273867,35.922463852041,0,93.055943625141,129.225960739459,265.486351341588,0,0,0.724999575434793,0.227586896570999,3.81380475439149,0,34.4743373241465,54.8216673160518,65.9774980746511,58.4589314637134,45.9472431162804,56.4552424373208,51.6405143878819,40.7855714155896,137.774029412695,0,0.697118721393016,13.4662952381645,4.10191401049204,0,0.0897576444097721,0.108647371922008,0.638002319463839,0.0915975934018623,0,0,0,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0,1.26598838716816,28.72897423601,0,1.29833183845255,2.98578579323551,19.3722066262313,15.8867837682743,0.889563386041866,0.741383633679017,0.522109747527277,17.0524866441113,3.21031058919516,42.8703935677371,4.01400536274465,0,0,3.15667522279512,42.3467506170324,332.088946369082,2.52746318513952,1.80388103297391,3.5253985075064,0,0,0,0,3.9845336444171,0,1.73559738335131,0,0,3.66926003308263,0.171986032471617,0,0,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| ||
|short_description=p1@NELL2 | |short_description=p1@NELL2 | ||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p1@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NELL2_5end |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | 0bp_to_ENST00000452445, ENST00000543684, ENST00000547751, ENST00000549027, ENST00000551601_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | Q99435F5H5N4Q96JS2F8VVB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.21e-13 | 18 |
alpha-beta T cell | 3.21e-13 | 18 |
immature T cell | 3.21e-13 | 18 |
mature T cell | 3.21e-13 | 18 |
immature alpha-beta T cell | 3.21e-13 | 18 |
CD8-positive, alpha-beta T cell | 7.92e-11 | 11 |
T cell | 9.47e-08 | 25 |
pro-T cell | 9.47e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.36e-07 | 10 |