FFCP PHASE1:Hg19::chr12:30907749..30907771,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65981 | |EntrezGene=65981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21259 | |HGNC=21259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000546129_5end | |association_with_transcript=0bp_to_ENST00000546129_5end | ||
|cluster_id=chr12:30907749..30907771,- | |||
|description=CAGE_peak_3_at_CAPRIN2_5end | |description=CAGE_peak_3_at_CAPRIN2_5end | ||
|id=chr12:30907749..30907771,- | |id=chr12:30907749..30907771,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.82e-15!94;UBERON:0001016!5.82e-15!94;UBERON:0001017!1.30e-14!82;UBERON:0001049!1.36e-13!57;UBERON:0005068!1.36e-13!57;UBERON:0006241!1.36e-13!57;UBERON:0007135!1.36e-13!57;UBERON:0005743!9.61e-13!86;UBERON:0000955!1.33e-12!69;UBERON:0006238!1.33e-12!69;UBERON:0002780!2.44e-11!41;UBERON:0001890!2.44e-11!41;UBERON:0006240!2.44e-11!41;UBERON:0002616!3.08e-11!59;UBERON:0003080!5.83e-11!42;UBERON:0007023!9.55e-10!115;UBERON:0001869!1.18e-09!32;UBERON:0002020!2.26e-09!34;UBERON:0003528!2.26e-09!34;UBERON:0001893!2.32e-09!34;UBERON:0002791!4.90e-09!33;UBERON:0003075!2.35e-08!86;UBERON:0007284!2.35e-08!86;UBERON:0000956!4.91e-08!25;UBERON:0000203!4.91e-08!25;UBERON:0002346!1.22e-07!90;UBERON:0002619!1.75e-07!22;UBERON:0000025!6.37e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.02e-09;32!UBERON:0002791;6.14e-09;32!UBERON:0002780;1.00e-08;41!UBERON:0001890;1.00e-08;41!UBERON:0000956;1.79e-08;25!UBERON:0000203;1.79e-08;25!UBERON:0003528;2.01e-08;34!UBERON:0002020;2.01e-08;34!UBERON:0001893;3.24e-08;34!UBERON:0002619;7.05e-08;22!UBERON:0000073;1.08e-07;53!UBERON:0002616;1.08e-07;53!UBERON:0001016;4.49e-07;83!UBERON:0001950;8.86e-07;20!UBERON:0001017;8.99e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.15e-18,89;UBERON:0001049,8.94e-16,56;UBERON:0005068,8.94e-16,56;UBERON:0006241,8.94e-16,56;UBERON:0007135,8.94e-16,56;UBERON:0001017,3.51e-15,81;UBERON:0000073,2.61e-14,53;UBERON:0002616,2.61e-14,53;UBERON:0000955,6.67e-13,68;UBERON:0006238,6.67e-13,68;UBERON:0002780,1.19e-12,41;UBERON:0001890,1.19e-12,41;UBERON:0003080,1.19e-12,41;UBERON:0006240,1.19e-12,41;UBERON:0001869,6.15e-11,32;UBERON:0002791,1.20e-10,32;UBERON:0003528,1.45e-10,34;UBERON:0002020,1.45e-10,34;UBERON:0001893,2.40e-10,34;UBERON:0003075,9.68e-10,82;UBERON:0007284,9.68e-10,82;UBERON:0000956,4.79e-09,25;UBERON:0000203,4.79e-09,25;UBERON:0007023,5.23e-09,114;UBERON:0002346,1.07e-08,86;UBERON:0000025,1.63e-08,192;UBERON:0002619,2.12e-08,22;UBERON:0010314,5.40e-08,132;UBERON:0003056,2.94e-07,61;UBERON:0001950,3.19e-07,20 | |||
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| ||
|short_description=p3@CAPRIN2 | |short_description=p3@CAPRIN2 | ||
}} | }} |
Latest revision as of 02:47, 18 September 2015
Short description: | p3@CAPRIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPRIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546129_5end |
EntrezGene: | CAPRIN2 |
HGNC: | 21259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.15e-18 | 89 |
neural tube | 8.94e-16 | 56 |
neural rod | 8.94e-16 | 56 |
future spinal cord | 8.94e-16 | 56 |
neural keel | 8.94e-16 | 56 |
central nervous system | 3.51e-15 | 81 |
regional part of nervous system | 2.61e-14 | 53 |
regional part of brain | 2.61e-14 | 53 |
brain | 6.67e-13 | 68 |
future brain | 6.67e-13 | 68 |
regional part of forebrain | 1.19e-12 | 41 |
forebrain | 1.19e-12 | 41 |
anterior neural tube | 1.19e-12 | 41 |
future forebrain | 1.19e-12 | 41 |
cerebral hemisphere | 6.15e-11 | 32 |
regional part of telencephalon | 1.20e-10 | 32 |
brain grey matter | 1.45e-10 | 34 |
gray matter | 1.45e-10 | 34 |
telencephalon | 2.40e-10 | 34 |
neural plate | 9.68e-10 | 82 |
presumptive neural plate | 9.68e-10 | 82 |
cerebral cortex | 4.79e-09 | 25 |
pallium | 4.79e-09 | 25 |
adult organism | 5.23e-09 | 114 |
neurectoderm | 1.07e-08 | 86 |
tube | 1.63e-08 | 192 |
regional part of cerebral cortex | 2.12e-08 | 22 |
structure with developmental contribution from neural crest | 5.40e-08 | 132 |
pre-chordal neural plate | 2.94e-07 | 61 |
neocortex | 3.19e-07 | 20 |