FFCP PHASE1:Mm9::chr2:13495659..13495702,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22352 | |EntrezGene=22352 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1126 | |||
|TSSclassifier=NA | |||
|UniProt=P20152,E9PZV5 | |UniProt=P20152,E9PZV5 | ||
|association_with_transcript=80bp_to_ENSMUST00000028062,ENSMUST00000169645_5end | |association_with_transcript=80bp_to_ENSMUST00000028062,ENSMUST00000169645_5end | ||
|cluster_id=chr2:13495659..13495702,+ | |||
|description=CAGE_peak_5_at_Vim_5end | |description=CAGE_peak_5_at_Vim_5end | ||
|id=chr2:13495659..13495702,+ | |id=chr2:13495659..13495702,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.39e-10,54;CL:0000333,2.08e-08,10;CL:0000095,2.08e-08,10;CL:0000243,2.08e-08,10;CL:0000123,2.08e-08,10;CL:0000125,2.08e-08,10;CL:0000030,2.08e-08,10;CL:0000339,2.08e-08,10;CL:0000215,2.78e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.04e-07!23;UBERON:0001009!2.04e-07!23 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.174840804837995,0.333109761815663,0,0,0.315462165358238,0.137114433605739,0,0.17008658030214,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0.418531630736908,1.5626706890476,0,0,0,0,0.755380907853464,1.92616169317078,0.917733760808408,0,0.436050312760893,2.85592037554813,1.94429899074283,2.09979632438044,1.43752564364972,0.167782606057736,0,0,1.54355661621568,0.85960031981627,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.449949858640699,0,0.7104801149461,0.599200221036809,0,0.207379224616955,0.540023753326763,0.841299845405528,0,0,0.122490799214954,0.670918297127655,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.427115042397309,0.745597783301202,7.1182621733193,6.95258352982427,1.44932244350839,0.860423876981386,0,0,0,0,0.140444420131752,1.53387290320252,2.07828803682295,3.88673531961374,0.422530259330042,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.705532242814229,0.251333182659351,0.494389935468748,0.578397427679647,0.884610551949874,0.485300549842228,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,4.07371423320129,3.59941638596045,5.97230067243404,0,0,0,0.173824320192276,0,0,0,1.62942982160506,0.373220911830279,0,0,0.130120442962704,0.459804208866946,0.720248519221397,0.60281927134286,0.476255494059295,0.384341160854549,0.281105173679186,0,0.431135985865684,0.378212160335639,1.05570674498369,0.657587197282725,1.94633074457919,0.696504333044333,1.23469281844766,0.398068533636986,4.21327912387941,4.37491442095016,1.98914449576915,0.828503090142008,0.469052119962192,0.36012412292203,1.42046841351126,0.590292695242212,0.617068451549513,0.697601834251224,0.268273401399619,0.817357396570186,0.822799249567402,0.164167464079095,0.243206428637567,0.730999937126662,0.219550115291051,0.536825675041487,0.210289948564127,0.411618449517138,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.80673409849337,0,0.380451252225118,0,0.329397909448022,0,0,0,0.898819408654221,0,0,0.379335801906163,0,1.1270773567308,0.203651327845314,0,0.350679099451593,0.316182685621286,0.295220295959204,0,0,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.160550589987792,0.117211686592203,3.27869890753351,0,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.567760340833074,0.178065603667255,1.30309567482861,0.494910368917606,0,0.728341908464944,0,0,0.590603785761546,0,0.516856586336442,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0,0.354680467284547,0.891844088010353,0.493647061806363,1.2178597964584,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,0,0,0,0,0,0,0,5.26933132980952,3.35883485576779,6.21899882119907,1.90934123603023,0.158167996790568,0,0.324016022465404,0.418176592028937,0.436725127492355,0.269728692769641,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.496375471371293,0,0.516639293910924,0.337912250981556,0.704143431874524,0.13020438484395,0.419437377702843,0,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.269141569828427,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.31136204275253,0,0.341467211508268,0.486213434136588,1.25767897576789,0.551530525350042,0,0.618105171716683,0.320919209591815,0.505394423527595,0.760437899670719,0,0.37456602987953,0.384150914429216,0.574354689556133,0,0.115884325944855,0.38581844092741,0,0.147198920134397,1.02860775715625,0.532427418478012,0.953744759789284,0.290692833264657,0.752875043322645,0.169229215783353,0.365855945745545,0.789209134313529,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,1.22769312950907,0.77468420592983,0.385813221962283,0.749431733813838,0.233931608445408,0.214871054048298,1.3390183244819,0.441182838239031,0 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| ||
|short_description=p5@Vim | |short_description=p5@Vim | ||
}} | }} |
Latest revision as of 19:12, 25 September 2015
Short description: | p5@Vim |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Vim_5end |
Coexpression cluster: | MCL_coexpression_mm9:1126 |
Association with transcript: | 80bp_to_ENSMUST00000028062, ENSMUST00000169645_5end |
EntrezGene: | Vim |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.39e-10 | 54 |
migratory neural crest cell | 2.08e-08 | 10 |
neuron associated cell | 2.08e-08 | 10 |
glial cell (sensu Vertebrata) | 2.08e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.08e-08 | 10 |
glial cell | 2.08e-08 | 10 |
glioblast | 2.08e-08 | 10 |
glioblast (sensu Vertebrata) | 2.08e-08 | 10 |
barrier cell | 2.78e-08 | 3 |