FFCP PHASE1:Hg19::chr12:16516767..16516832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:16516767..16516832,+ | |||
|coexpression_cluster_id=C892 | |||
|description=CAGE_peak_at_chr12:16516767..16516832,+ | |description=CAGE_peak_at_chr12:16516767..16516832,+ | ||
|id=chr12:16516767..16516832,+ | |id=chr12:16516767..16516832,+ | ||
|ontology_enrichment_celltype=CL:0000136!3.13e-11!15;CL:0000680!1.54e-08!57;CL:0000056!1.54e-08!57;CL:0000355!1.54e-08!57;CL:0000187!1.01e-07!54;CL:0000393!1.39e-07!60;CL:0000211!1.39e-07!60 | |ontology_enrichment_celltype=CL:0000136!3.13e-11!15;CL:0000680!1.54e-08!57;CL:0000056!1.54e-08!57;CL:0000355!1.54e-08!57;CL:0000187!1.01e-07!54;CL:0000393!1.39e-07!60;CL:0000211!1.39e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.87e-14;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.77e-15,15;CL:0000680,6.75e-08,58;CL:0000056,6.75e-08,58;CL:0000355,6.75e-08,58;CL:0000393,1.53e-07,61;CL:0000211,1.53e-07,61;CL:0000187,6.67e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!9.46e-14!216;UBERON:0000481!1.51e-10!347;UBERON:0000468!8.45e-10!659;UBERON:0005256!1.06e-09!143;UBERON:0000922!1.27e-09!612;UBERON:0003104!1.44e-09!238;UBERON:0009142!1.44e-09!238;UBERON:0000923!5.94e-09!604;UBERON:0005291!5.94e-09!604;UBERON:0006598!5.94e-09!604;UBERON:0002532!5.94e-09!604;UBERON:0000475!9.31e-09!365;UBERON:0002050!9.35e-09!605;UBERON:0005423!9.35e-09!605;UBERON:0001007!2.07e-08!155;UBERON:0001555!2.07e-08!155;UBERON:0007026!2.07e-08!155;UBERON:0004119!2.21e-08!169;UBERON:0000925!2.21e-08!169;UBERON:0006595!2.21e-08!169;UBERON:0000926!5.66e-08!448;UBERON:0004120!5.66e-08!448;UBERON:0006603!5.66e-08!448;UBERON:0000914!8.14e-08!83;UBERON:0002329!8.14e-08!83;UBERON:0003077!8.14e-08!83;UBERON:0003059!8.14e-08!83;UBERON:0007282!8.14e-08!83;UBERON:0009618!8.14e-08!83;UBERON:0007285!8.14e-08!83;UBERON:0002385!1.42e-07!63;UBERON:0001015!1.42e-07!63;UBERON:0000383!1.42e-07!63;UBERON:0000490!2.19e-07!138;UBERON:0000480!2.30e-07!626;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129;UBERON:0000486!2.46e-07!82;UBERON:0000467!3.21e-07!625;UBERON:0001134!3.25e-07!61;UBERON:0002036!3.25e-07!61;UBERON:0003082!3.25e-07!61;UBERON:0004290!4.09e-07!70;UBERON:0000483!4.52e-07!309;UBERON:0004122!5.15e-07!15;UBERON:0000119!5.48e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;4.28e-08;22!UBERON:0000079;4.28e-08;22!UBERON:0003937;1.94e-07;12!UBERON:0005399;1.94e-07;12!UBERON:0002367;3.61e-07;11!UBERON:0010147;3.61e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.58e-13,199;UBERON:0005256,8.45e-11,122;UBERON:0003104,4.20e-09,160;UBERON:0009142,4.20e-09,160;UBERON:0004921,8.72e-09,118;UBERON:0004122,3.04e-08,15;UBERON:0003101,3.65e-08,22;UBERON:0000079,3.65e-08,22;UBERON:0001007,1.38e-07,145;UBERON:0001555,1.38e-07,145;UBERON:0007026,1.38e-07,145;UBERON:0003937,1.47e-07,12;UBERON:0005399,1.47e-07,12;UBERON:0000162,2.18e-07,14;UBERON:0001353,2.18e-07,14;UBERON:0000163,2.18e-07,14;UBERON:0006866,2.18e-07,14;UBERON:0000164,2.18e-07,14;UBERON:0000931,2.18e-07,14;UBERON:0002367,2.24e-07,11;UBERON:0010147,2.24e-07,11;UBERON:0009846,2.24e-07,11;UBERON:0003353,2.24e-07,11;UBERON:0004902,2.24e-07,11;UBERON:0003820,2.24e-07,11;UBERON:0009847,2.24e-07,11;UBERON:0004119,2.74e-07,160;UBERON:0000925,2.74e-07,160;UBERON:0006595,2.74e-07,160;UBERON:0000490,4.78e-07,148;UBERON:0002329,7.89e-07,71;UBERON:0003059,7.89e-07,71;UBERON:0007282,7.89e-07,71;UBERON:0004290,7.89e-07,71;UBERON:0009618,7.89e-07,71;UBERON:0002385,8.56e-07,64;UBERON:0001015,8.56e-07,64;UBERON:0000383,8.56e-07,64;UBERON:0001134,9.36e-07,62;UBERON:0002036,9.36e-07,62;UBERON:0003082,9.36e-07,62 | |||
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|phase1_expression=6.35874327446948,10.7050261945492,12.1220787522535,5.00366491765652,11.6209884551095,6.97870819280295,20.2639902534648,13.2661173419635,16.4546945765898,0.737201809504527,0.697801167972428,0.218441372130172,0,1.60896258848061,2.31978163009541,3.36162573225888,2.41077811209591,1.46062018077475,2.92759679274304,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0,0.382067028739756,0.738905305049512,0.393553906568396,0,0,0.154816123316076,1.83884244895785,0.30120591877825,2.58827807116751,0,0,0.587200878669695,0,0,0.651032612147555,0,1.6194683300949,0.77272670290256,1.30858414901608,0.755751887377619,0.485168122375632,0.697287110717054,0.822335776043652,0.619412741790207,0.575384784644301,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,1.50593871634084,0.545812300115692,0.898893937780338,1.53041946185451,0.962787081228281,0.639337125799041,1.64925650093358,0.797854630486527,0,0.290209238628584,1.70215567407342,0,0.75374599577023,0.521482918420201,0.65156653411535,1.21079900526674,0.368277635987565,0.949387162322653,0.211255286311942,0.212604299965044,0,0.786300418025466,0.300353785683013,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.12786256184353,1.80719576192283,0,1.01392563272577,0,0,0.567208902984407,0.665188192387692,0.43917392846563,0.392937226493138,0.364295288292542,0.370784442784429,1.62273696827342,1.0447784237956,1.19662164466979,0,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0.626984899610432,0,0,0,0.805658634218294,0,0,0.735326160691737,0.81014194788176,0.446498641420399,0,0.112611480483322,0,0,0.183201743930407,0,0,0,2.48485975847659,3.79891534993739,1.05927344650575,7.74458876021797,3.90135220418193,1.68203280042692,0,0.49333509683432,2.48968828319813,1.61652806483626,2.28846664358842,0.605429710579726,1.15235184896,0,4.37024107562449,0,3.13842229158782,1.17434498643765,0.809364721840658,0.561803226808994,1.02077085627447,0.245668634623536,1.85986406116378,1.18800285728205,0.741800787835671,0.910161361938026,0,0.673344455816265,0.625592599359821,0.831192346452549,0.877955241761676,0.919463387397059,1.35214253015937,0.567160915800105,0.358779271377724,0.213557388818567,1.69545520927649,0,0,0.257640540045629,0.744467425326359,0,0.584622030967192,0.504867548488229,1.01254888506529,0.80823028409406,0.710019185033229,0.403008392910561,0.508681776931463,0.773043412653187,0.272746120590835,0.573609190778008,1.34171076742555,0.795178609928912,1.85910308591229,1.55491582523056,2.27088765788066,2.18986415445498,1.56449532329816,0,0,2.3218396401599,1.44375896333917,1.41968160047813,1.34867752062481,1.44606617930089,1.10293972732394,1.52515610864684,2.60997681022206,1.21348177344148,1.76599318612811,3.46272441251751,0,0,0.4115740113314,0,17.7457048750563,22.6050259835854,20.0868568271677,0,0.491953754172454,0.514703430895577,2.41450627898976,0,0.201057944823262,0.925884451585296,0.977424915930974,1.03993478527958,0,0,0.117408694235822,0.433099343283221,0.462985512576611,0,0,0,0,0.468008530278475,0.297262324577456,2.81201501960331,0,1.27597587518148,0.716468181622786,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0.300343057843917,0,0.224262168690721,0.43596006883328,0.4400297149257,0.258543431515556,0,0.845302752556,2.92531928243358,5.2003718455683,0.771622122786426,0,1.0656887160644,1.57275793023962,0.542621605391443,0.823240336780769,0.65147236858747,1.77695974371273,0,0.904318131178758,1.74306691720059,1.19967589418468,2.43247561282381,2.00902836572851,2.10833939483032,1.19812427745791,1.14861935834114,0,2.02693829334611,2.67119219315498,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.71768088406796,2.50085260529839,2.98391526069709,1.87173775377726,3.39015078714607,3.15404830067869,1.28855556491985,0.300946099727719,4.5481500811197,0,0,0.184369168541703,2.34585759063824,0.195801157462741,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,5.95458738765064,0.306923946576125,1.96462066103151,4.86928767171664,0.511707249066704,0.965123526861645,1.48418066444991,0.616838775210622,2.13074070375753,2.13530605635904,4.15403543346897,2.44041794765914,3.50492403815704,3.80962293576241,4.32780647998713,2.75554675595056,3.64182336013434,8.52308697236257,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0.541892875087706,0,0.254876273045038,2.49322802678617,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0.325378394664303,9.47977307159045,0,0,0,1.95018073810956,11.2478750890912,1.06337790121334,2.92692372517824,2.76306614507033,1.92971201478343,2.25582514223375,2.17525040871343,1.27839941124151,0.534192213880424,5.45440220691228,1.34533047155574,0.893288987462089,1.6185244936888,2.78907329578371,8.81474571125792,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,1.29726953372744,0.429374660225974,0.744316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| ||
|short_description=p@chr12:16516767..16516832,+ | |short_description=p@chr12:16516767..16516832,+ | ||
}} | }} |
Latest revision as of 07:14, 24 July 2015
Short description: | p@chr12:16516767..16516832, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:16516767..16516832, + |
Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.77e-15 | 15 |
muscle precursor cell | 6.75e-08 | 58 |
myoblast | 6.75e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-08 | 58 |
electrically responsive cell | 1.53e-07 | 61 |
electrically active cell | 1.53e-07 | 61 |
muscle cell | 6.67e-07 | 55 |