FFCP PHASE1:Mm9::chr2:130120884..130120972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228598 | |EntrezGene=228598 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1111 | |||
|TSSclassifier=NA | |||
|UniProt=A2BI80 | |UniProt=A2BI80 | ||
|association_with_transcript=0bp_to_ENSMUST00000110288_5end | |association_with_transcript=0bp_to_ENSMUST00000110288_5end | ||
|cluster_id=chr2:130120884..130120972,+ | |||
|description=CAGE_peak_1_at_Ebf4_5end | |description=CAGE_peak_1_at_Ebf4_5end | ||
|id=chr2:130120884..130120972,+ | |id=chr2:130120884..130120972,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.96e-09!33;CL:0000047!7.96e-09!33;CL:0000031!7.96e-09!33;CL:0000404!7.96e-09!33;CL:0000393!4.30e-08!39;CL:0000211!4.30e-08!39;CL:0000221!3.87e-07!44;CL:0000133!3.87e-07!44;CL:0002319!9.99e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.91e-09,33;CL:0000047,5.91e-09,33;CL:0000031,5.91e-09,33;CL:0000404,5.91e-09,33;CL:0000393,6.69e-08,39;CL:0000211,6.69e-08,39;CL:0000221,6.10e-07,44;CL:0000133,6.10e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.03e-13!102;UBERON:0000924!4.03e-13!102;UBERON:0006601!4.03e-13!102;UBERON:0000468!1.07e-12!333;UBERON:0002346!4.79e-12!71;UBERON:0003075!4.79e-12!71;UBERON:0007284!4.79e-12!71;UBERON:0001017!1.28e-11!73;UBERON:0005743!1.28e-11!73;UBERON:0000073!6.99e-11!75;UBERON:0001016!6.99e-11!75;UBERON:0000922!1.46e-10!328;UBERON:0003056!4.40e-09!49;UBERON:0000033!1.04e-08!63;UBERON:0001049!8.40e-08!52;UBERON:0005068!8.40e-08!52;UBERON:0006241!8.40e-08!52;UBERON:0007135!8.40e-08!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.60e-12,95;UBERON:0000924,4.60e-12,95;UBERON:0006601,4.60e-12,95;UBERON:0001017,1.31e-11,73;UBERON:0002346,2.74e-11,64;UBERON:0003075,2.74e-11,64;UBERON:0007284,2.74e-11,64;UBERON:0010371,7.65e-11,73;UBERON:0001016,9.67e-11,75;UBERON:0000922,7.54e-10,320;UBERON:0003056,5.04e-09,49;UBERON:0010314,8.32e-09,92;UBERON:0001049,9.66e-08,52;UBERON:0005068,9.66e-08,52;UBERON:0006241,9.66e-08,52;UBERON:0007135,9.66e-08,52;UBERON:0000073,1.99e-07,54 | |||
|phase1_expression=22.9012851359855,0,0,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,11.4566104357775,11.4555932278051,8.07605709511399,4.69434806608824,5.01457859675027,1.5378032791413,0.972149495371417,1.95980990275508,4.31257693094915,0,0,0.336093799142464,0.771778308107841,0.85960031981627,2.57836046138721,9.5088736604011,11.6378015439847,13.9442908771359,2.03306719241479,0.889294796111139,0.449949858640699,0,0,7.19040265244171,12.2949857702897,16.071889907814,14.850653216486,14.302097371894,17.7103610330358,8.83474163806454,7.10446635446733,7.18841032636773,7.35375029288017,6.60695285996332,4.59674417106676,3.22573719838111,15.2988093767025,15.2784364816024,6.77187381723788,4.74611098302348,7.87867654044352,6.87592114995646,14.142172102736,16.657486653495,19.0127434741807,0.757261933331841,1.73814588245607,6.95674772884027,0.860423876981386,1.3599426674155,0.539703191637817,0,0,1.54488862144927,0,0,0,15.7744630149882,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.517875767294343,6.53145411885229,10.4091196059682,9.74289530598852,6.6878494204257,9.79697163592047,9.99504010653491,3.01599819191221,3.46072954828123,2.74738778147832,0.884610551949874,5.17653919831709,2.20841518460394,2.42437626567611,7.45567044872489,5.85561594023094,4.60782754989601,0.766371165625774,0,0,0,8.38827580667007,7.32000964509802,10.178002521142,6.95297280769106,7.92717917724025,7.68815764870372,10.8701646255398,26.3763952372319,3.98102305952298,2.77995034277042,2.94618598241064,13.5325260681212,14.4838325793088,14.0448461248172,15.3718914192429,17.3493072835886,17.1672385181699,17.8033276663485,9.8307280880826,3.66465587985832,13.615637772083,14.6039433056078,11.6173738186615,19.7413546950174,16.0195996600197,11.3180175024369,21.0976322827603,0,0,0,3.72826390563903,5.39409937956521,5.58192390529146,5.44512891845984,3.73852040320067,3.23960937063494,3.0229412817553,2.14618721119695,1.5179494507732,2.13927804887525,2.46251196118643,2.02672023864639,2.04679982395465,2.85415149878366,3.22095405024892,9.88362758251398,6.99751364179134,0,0.528901133327089,18.1295012954949,26.2427439202296,13.4022159774977,13.1094291005173,9.78463392917429,7.41879941838981,0.949058123089023,5.76446341534038,6.28338022000674,5.76973768919337,5.06906626509712,1.79763881730844,1.72910439899755,1.7922714592893,14.7940962743404,11.7675967988021,10.1436962105772,13.4409876377907,14.9343415119072,16.3416460344442,8.60016904889899,2.80459281161244,2.35498091762062,2.71473760627961,0.889357881261447,4.17112764290235,3.93117990226406,0.449724224769707,0.608580364165509,0.964708639009667,1.2731292589071,2.30156909960649,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,3.43241440426017,1.51547326768267,0.896987067609561,0,3.32555742299888,14.2118558827864,9.28900365719548,9.16623463186016,9.15291968325158,9.04533790185805,11.1880511216426,8.78101415360095,8.82756806994669,7.52979944805835,12.437471955284,5.89907932976657,3.45369963731791,4.62876987460837,0,0,0,1.37968373152366,6.10092241953609,7.14991288212439,0,2.27223834483936,7.2566890465739,5.85658116444958,17.4492952163567,10.9925647058174,16.2643032080148,13.0215204162863,13.7635638569464,12.5670018901864,12.2539211163422,7.71171159412337,14.4778886912434,29.9150214160989,30.4598613991187,20.951205617512,0,8.25454162926937,5.74414758233027,3.96070667487386,4.42952839321159,5.84126781093462,5.16856586336442,3.99887102425256,3.92147116223193,3.47640433729398,3.16255825724996,0,3.74483566329167,18.006109403131,25.2249433376371,23.3627368184436,22.8768901398533,22.4744710178609,20.8977256164694,20.3991515906782,1.64270195644597,4.44847348814022,0.882113592219848,3.79238381765404,5.65125493435669,5.42816324353403,4.05865969610664,4.59594519286172,2.91480836629851,7.23158677840988,1.19609616558497,9.70018279427146,5.74103034846106,1.50694765603753,0.546776910884101,1.60144721244566,0.169978429993855,0,0.276399947608848,0.954670618015114,21.3526795667266,14.2323626988794,10.8005340821801,13.381650944926,9.17122767733946,7.8221320903196,10.7449492442937,4.4498510137285,1.55537967950151,0.621339313086926,0,12.5593898676942,13.8985131983962,17.1117045742762,11.3660644660403,13.8544022902438,14.6696548307192,9.50492009360836,8.07416952077974,2.65742532908607,1.72818003754719,0,2.8381530140623,1.33524244314275,1.42912905275575,1.07416017400489,0.79472541912506,0.600977247599844,0.147689527174577,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0,0.233753804363138,1.13365191807606,2.88581739386284,1.52513556236109,1.67884616364078,4.44336066274038,2.25218970541418,10.6227942075014,3.85863082342319,1.00314420807073,8.471277639256,5.9842280745933,7.44764167471216,6.70227411140382,3.42541259885321,4.5323633843382,5.40018000185445,4.05289082901798,4.07828168085784,9.31968561153276,3.32119512269365,13.167820822234,11.609885191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| |phase1_expression=22.9012851359855,0,0,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0.202475267389826,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,11.4566104357775,11.4555932278051,8.07605709511399,4.69434806608824,5.01457859675027,1.5378032791413,0.972149495371417,1.95980990275508,4.31257693094915,0,0,0.336093799142464,0.771778308107841,0.85960031981627,2.57836046138721,9.5088736604011,11.6378015439847,13.9442908771359,2.03306719241479,0.889294796111139,0.449949858640699,0,0,7.19040265244171,12.2949857702897,16.071889907814,14.850653216486,14.302097371894,17.7103610330358,8.83474163806454,7.10446635446733,7.18841032636773,7.35375029288017,6.60695285996332,4.59674417106676,3.22573719838111,15.2988093767025,15.2784364816024,6.77187381723788,4.74611098302348,7.87867654044352,6.87592114995646,14.142172102736,16.657486653495,19.0127434741807,0.757261933331841,1.73814588245607,6.95674772884027,0.860423876981386,1.3599426674155,0.539703191637817,0,0,1.54488862144927,0,0,0,15.7744630149882,0,0,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.517875767294343,6.53145411885229,10.4091196059682,9.74289530598852,6.6878494204257,9.79697163592047,9.99504010653491,3.01599819191221,3.46072954828123,2.74738778147832,0.884610551949874,5.17653919831709,2.20841518460394,2.42437626567611,7.45567044872489,5.85561594023094,4.60782754989601,0.766371165625774,0,0,0,8.38827580667007,7.32000964509802,10.178002521142,6.95297280769106,7.92717917724025,7.68815764870372,10.8701646255398,26.3763952372319,3.98102305952298,2.77995034277042,2.94618598241064,13.5325260681212,14.4838325793088,14.0448461248172,15.3718914192429,17.3493072835886,17.1672385181699,17.8033276663485,9.8307280880826,3.66465587985832,13.615637772083,14.6039433056078,11.6173738186615,19.7413546950174,16.0195996600197,11.3180175024369,21.0976322827603,0,0,0,3.72826390563903,5.39409937956521,5.58192390529146,5.44512891845984,3.73852040320067,3.23960937063494,3.0229412817553,2.14618721119695,1.5179494507732,2.13927804887525,2.46251196118643,2.02672023864639,2.04679982395465,2.85415149878366,3.22095405024892,9.88362758251398,6.99751364179134,0,0.528901133327089,18.1295012954949,26.2427439202296,13.4022159774977,13.1094291005173,9.78463392917429,7.41879941838981,0.949058123089023,5.76446341534038,6.28338022000674,5.76973768919337,5.06906626509712,1.79763881730844,1.72910439899755,1.7922714592893,14.7940962743404,11.7675967988021,10.1436962105772,13.4409876377907,14.9343415119072,16.3416460344442,8.60016904889899,2.80459281161244,2.35498091762062,2.71473760627961,0.889357881261447,4.17112764290235,3.93117990226406,0.449724224769707,0.608580364165509,0.964708639009667,1.2731292589071,2.30156909960649,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,3.43241440426017,1.51547326768267,0.896987067609561,0,3.32555742299888,14.2118558827864,9.28900365719548,9.16623463186016,9.15291968325158,9.04533790185805,11.1880511216426,8.78101415360095,8.82756806994669,7.52979944805835,12.437471955284,5.89907932976657,3.45369963731791,4.62876987460837,0,0,0,1.37968373152366,6.10092241953609,7.14991288212439,0,2.27223834483936,7.2566890465739,5.85658116444958,17.4492952163567,10.9925647058174,16.2643032080148,13.0215204162863,13.7635638569464,12.5670018901864,12.2539211163422,7.71171159412337,14.4778886912434,29.9150214160989,30.4598613991187,20.951205617512,0,8.25454162926937,5.74414758233027,3.96070667487386,4.42952839321159,5.84126781093462,5.16856586336442,3.99887102425256,3.92147116223193,3.47640433729398,3.16255825724996,0,3.74483566329167,18.006109403131,25.2249433376371,23.3627368184436,22.8768901398533,22.4744710178609,20.8977256164694,20.3991515906782,1.64270195644597,4.44847348814022,0.882113592219848,3.79238381765404,5.65125493435669,5.42816324353403,4.05865969610664,4.59594519286172,2.91480836629851,7.23158677840988,1.19609616558497,9.70018279427146,5.74103034846106,1.50694765603753,0.546776910884101,1.60144721244566,0.169978429993855,0,0.276399947608848,0.954670618015114,21.3526795667266,14.2323626988794,10.8005340821801,13.381650944926,9.17122767733946,7.8221320903196,10.7449492442937,4.4498510137285,1.55537967950151,0.621339313086926,0,12.5593898676942,13.8985131983962,17.1117045742762,11.3660644660403,13.8544022902438,14.6696548307192,9.50492009360836,8.07416952077974,2.65742532908607,1.72818003754719,0,2.8381530140623,1.33524244314275,1.42912905275575,1.07416017400489,0.79472541912506,0.600977247599844,0.147689527174577,0.302899349844443,0.381034033274999,0.302478555410522,0.194915761479505,0,0.233753804363138,1.13365191807606,2.88581739386284,1.52513556236109,1.67884616364078,4.44336066274038,2.25218970541418,10.6227942075014,3.85863082342319,1.00314420807073,8.471277639256,5.9842280745933,7.44764167471216,6.70227411140382,3.42541259885321,4.5323633843382,5.40018000185445,4.05289082901798,4.07828168085784,9.31968561153276,3.32119512269365,13.167820822234,11.609885191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| ||
|short_description=p1@Ebf4 | |short_description=p1@Ebf4 | ||
}} | }} |
Latest revision as of 17:41, 25 September 2015
Short description: | p1@Ebf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ebf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1111 |
Association with transcript: | 0bp_to_ENSMUST00000110288_5end |
EntrezGene: | Ebf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.91e-09 | 33 |
neuronal stem cell | 5.91e-09 | 33 |
neuroblast | 5.91e-09 | 33 |
electrically signaling cell | 5.91e-09 | 33 |
electrically responsive cell | 6.69e-08 | 39 |
electrically active cell | 6.69e-08 | 39 |
ectodermal cell | 6.10e-07 | 44 |
neurectodermal cell | 6.10e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.60e-12 | 95 |
ectoderm | 4.60e-12 | 95 |
presumptive ectoderm | 4.60e-12 | 95 |
central nervous system | 1.31e-11 | 73 |
neurectoderm | 2.74e-11 | 64 |
neural plate | 2.74e-11 | 64 |
presumptive neural plate | 2.74e-11 | 64 |
ecto-epithelium | 7.65e-11 | 73 |
nervous system | 9.67e-11 | 75 |
embryo | 7.54e-10 | 320 |
pre-chordal neural plate | 5.04e-09 | 49 |
structure with developmental contribution from neural crest | 8.32e-09 | 92 |
neural tube | 9.66e-08 | 52 |
neural rod | 9.66e-08 | 52 |
future spinal cord | 9.66e-08 | 52 |
neural keel | 9.66e-08 | 52 |
regional part of nervous system | 1.99e-07 | 54 |