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FFCP PHASE1:Mm9::chr17:56812744..56812751,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71810
|EntrezGene=71810
|HGNC=
|HGNC=
|MCL_coexpression_id=381
|TSSclassifier=NA
|UniProt=Q9CT10
|UniProt=Q9CT10
|association_with_transcript=64bp_to_ENSMUST00000002445,uc008dct.1,uc008dcu.1,uc008dcv.1_5end
|association_with_transcript=64bp_to_ENSMUST00000002445,uc008dct.1,uc008dcu.1,uc008dcv.1_5end
|cluster_id=chr17:56812744..56812751,+
|description=CAGE_peak_3_at_Ranbp3_5end
|description=CAGE_peak_3_at_Ranbp3_5end
|id=chr17:56812744..56812751,+
|id=chr17:56812744..56812751,+
|ontology_enrichment_celltype=CL:0000117!1.04e-09!23;CL:0000337!1.04e-09!23;CL:0000540!6.65e-09!33;CL:0000047!6.65e-09!33;CL:0000031!6.65e-09!33;CL:0000404!6.65e-09!33;CL:0002319!2.99e-07!43;CL:0000393!3.60e-07!39;CL:0000211!3.60e-07!39;CL:0000221!6.29e-07!44;CL:0000133!6.29e-07!44
|ontology_enrichment_celltype=CL:0000117!1.04e-09!23;CL:0000337!1.04e-09!23;CL:0000540!6.65e-09!33;CL:0000047!6.65e-09!33;CL:0000031!6.65e-09!33;CL:0000404!6.65e-09!33;CL:0002319!2.99e-07!43;CL:0000393!3.60e-07!39;CL:0000211!3.60e-07!39;CL:0000221!6.29e-07!44;CL:0000133!6.29e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,3.60e-13,23;CL:0000337,3.60e-13,23;CL:0000540,5.03e-10,33;CL:0000047,5.03e-10,33;CL:0000031,5.03e-10,33;CL:0000404,5.03e-10,33;CL:0002319,1.83e-08,43;CL:0000221,4.22e-08,44;CL:0000133,4.22e-08,44;CL:0000393,4.43e-08,39;CL:0000211,4.43e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.98e-15!75;UBERON:0001016!3.98e-15!75;UBERON:0001017!1.27e-14!73;UBERON:0005743!1.27e-14!73;UBERON:0001049!4.54e-13!52;UBERON:0005068!4.54e-13!52;UBERON:0006241!4.54e-13!52;UBERON:0007135!4.54e-13!52;UBERON:0000955!2.28e-12!50;UBERON:0006238!2.28e-12!50;UBERON:0002616!7.25e-12!49;UBERON:0002020!8.27e-12!34;UBERON:0002346!1.16e-11!71;UBERON:0003075!1.16e-11!71;UBERON:0007284!1.16e-11!71;UBERON:0000033!1.18e-10!63;UBERON:0004121!9.93e-10!102;UBERON:0000924!9.93e-10!102;UBERON:0006601!9.93e-10!102;UBERON:0002791!1.12e-09!29;UBERON:0003528!1.12e-09!29;UBERON:0001893!1.12e-09!29;UBERON:0003080!1.32e-09!40;UBERON:0003056!2.16e-09!49;UBERON:0002780!4.07e-09!39;UBERON:0001890!4.07e-09!39;UBERON:0006240!4.07e-09!39;UBERON:0007811!6.40e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.33e-21,54;UBERON:0001017,1.78e-20,73;UBERON:0001016,1.98e-20,75;UBERON:0001049,1.16e-19,52;UBERON:0005068,1.16e-19,52;UBERON:0006241,1.16e-19,52;UBERON:0007135,1.16e-19,52;UBERON:0002020,6.20e-18,34;UBERON:0002346,4.10e-17,64;UBERON:0003075,4.10e-17,64;UBERON:0007284,4.10e-17,64;UBERON:0000955,5.27e-17,47;UBERON:0006238,5.27e-17,47;UBERON:0002616,3.31e-16,46;UBERON:0003528,4.78e-15,29;UBERON:0002791,4.78e-15,29;UBERON:0001893,4.78e-15,29;UBERON:0004121,6.44e-15,95;UBERON:0000924,6.44e-15,95;UBERON:0006601,6.44e-15,95;UBERON:0003080,1.57e-14,40;UBERON:0002780,9.79e-14,39;UBERON:0001890,9.79e-14,39;UBERON:0006240,9.79e-14,39;UBERON:0010371,2.62e-13,73;UBERON:0003056,1.32e-12,49;UBERON:0000956,4.32e-09,21;UBERON:0001869,4.32e-09,21;UBERON:0000203,4.32e-09,21;UBERON:0010314,1.45e-08,92;UBERON:0002619,4.15e-08,17;UBERON:0002420,1.19e-07,8;UBERON:0007245,1.19e-07,8;UBERON:0010009,1.19e-07,8;UBERON:0010011,1.19e-07,8;UBERON:0000454,1.19e-07,8;UBERON:0000025,3.68e-07,114
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|phase1_expression=0.480446541314382,0,1.81999695755814,0.30246421130683,3.00537437967808,0.16787927191189,0.934450562382103,0.387369970324729,1.12630977721333,1.17032263160997,0,0.717949430958028,0.171200729931206,0.262261207256992,0.333109761815663,1.21485160433896,0,0.473193248037357,0.274228867211478,0.84877930359606,2.12608225377674,0.496454756004426,0.522399578277871,0.639969691173627,0,0.57423196411502,0,0.430942465371778,0.380046838912748,0.252030129759931,0.665191531965914,0,1.84519436275371,15.8481681015439,1.73310971850765,0.498703936075477,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,0,0,1.00717454380462,0.506884656097573,0.550640256485045,0,0.872100625521786,1.31811709640683,0.194429899074283,0.55994568650145,0,0.503347818173209,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,3.23706337375356,1.5869729378161,0.633831403506179,1.69422266034566,1.77858959222228,0.899899717281399,0.988866362566974,0,0.299600110518405,1.92109152660777,0.622137673850866,1.4850653216486,1.05162480675691,3.42781181284564,0.662605622854841,1.10241719293459,1.43768206527355,1.83843757322004,1.10115880999389,1.78762273319263,2.4577045320999,2.50583946687368,1.64677758484337,1.04182674111352,4.18774498502071,2.25105044012672,1.83357897332172,2.35702868378934,1.85083185038834,2.60959224155421,0.984440513331393,1.13357340160178,0.289864488701678,1.72084775396277,1.3599426674155,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,0.681721290312231,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,0.34255163915718,0.776813650941515,0.445326417194474,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.587943535678524,0.753999547978053,0,0.433798070759735,0.884610551949874,0.485300549842228,0.441683036920787,0,0,1.75668478206928,1.25668024088073,0.510914110417183,0.479260498023681,0,0.508280908292259,2.09706895166752,1.37250180845588,2.89005009859588,1.91206752211504,3.06858548796397,2.70124457927428,2.59586020908412,0.81471491080253,0.248813941220186,0.758168275301024,1.05220927943237,0.260240885925407,1.14951052216736,0.540186389416048,0.60281927134286,0.612328492361951,1.2811372028485,0.749613796477831,0.776110112217047,0.862271971731369,1.13463648100692,0.175951124163949,1.31517439456545,0,0.348252166522167,0.61734640922383,1.19420560091096,0.702213187313235,0.257347907114715,0.852490498186778,0.207125772535502,0.938104239924385,0.900310307305074,0.946978942340841,0.787056926989615,0.462801338662135,0.697601834251224,1.3413670069981,0.233530684734339,0.493679549740441,0.32833492815819,0.405344047729279,0.438599962275997,0.658650345873152,0.134206418760372,1.05144974282064,2.16099685996497,0.330418782983798,0.264450566663544,1.70630600428187,0,0.515469845288373,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.456994050438915,2.25415471346161,0.610953983535943,0.581857461502877,0.280543279561274,0.442655759869801,0.295220295959204,0.156998727841375,0.493588655687202,1.1858105083486,0.333690211432188,1.57247196090562,0.899448449539415,0.608580364165509,0.964708639009667,0.50925170356284,0.575392274901621,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0,0.538192240565737,0,0.184753190166605,1.51593129416388,1.14075483509418,1.18821560042632,0.469380496577004,0.670025029767263,0.238043640886014,0.195133647857799,0.630540576424764,0.221464689648775,0.318909537314974,0.327726629431476,0.518054945597687,0.578596234326046,0,1.08781136763742,0,0.275936746304732,2.24770825982909,2.34423373184406,0.491804836130026,0.252470927204373,1.26203287766503,0.390438744296638,0.861693590931196,1.43381278771531,0.668396022247182,0.283076530788832,0.809621403349789,0.876767573733936,1.18586333383957,1.92792789853084,0.283880170416537,0.890328018336276,0.162886959353576,0.329940245945071,0,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.29214146584111,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.18006109403131,1.55230420539305,1.07168517515796,0.532020700926821,0.178368817602071,0.822745103010605,0.913394847343798,0.469343416127421,0.42366414172764,0.441056796109924,0.32977250588296,0.484393280087717,0.542816324353403,0,0.164140899745061,0.582961673259701,1.29797711407357,0.683483523191411,0.619160603889667,0.185194527369712,1.31857919903284,0.410082683163076,0.457556346413045,0,0,0.138199973804424,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0.655087691238533,0.269728692769641,0.578574190077352,0,0.388844919875379,0.621339313086926,10.1464728963154,1.04661582230785,1.15820943319968,1.75006069509643,1.42075805825504,1.01373675294467,0.821500670520278,1.3020438484395,1.99232754408851,4.1069300540421,4.60848010012585,0.316011120628178,0.810900861160657,0.718976700153791,0.77952493786677,0.537080087002444,0.596044064343795,0.600977247599844,0.738447635872886,0.807731599585181,0.304827226619999,0.907435666231565,0.584747284438515,0.577271049841977,0.233753804363138,0,0.665957860122194,0.717710852875806,1.34307693091263,0,0.563047426353546,0.73260649706906,0,1.00314420807073,1.12950368523413,4.60325236507177,4.58316410751517,0.859265911718438,2.05524755931193,1.5107877947794,0,3.15224842256954,1.81256963593682,1.03552062350364,0.726511433089237,0.798049746802062,1.53660245178721,0.729320151204882,0.838452650511929,0.367687016900028,0.44449345560323,0,0.320919209591815,1.26348605881899,0.25347929989024,0.565879024158229,0.655490552289177,0.89635213366817,0.516919220600519,0.476293691283074,0.463537303779422,1.15745532278223,0.412085900803307,0.441596760403192,0,0.177475806159338,0.953744759789284,0.872078499793971,0.376437521661322,0.423073039458382,0.365855945745545,1.31534855718921,0.814824683075171,0.561142271657738,0.711810108745045,0.591026894253381,0.409231043169689,0.619747364743864,0.771626443924566,1.49886346762768,0.935726433781634,0.644613162144895,0.191288332068843,1.32354851471709,0.231867835620421
|short_description=p3@Ranbp3
|short_description=p3@Ranbp3
}}
}}

Latest revision as of 17:20, 26 September 2015

Short description:p3@Ranbp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ranbp3_5end
Coexpression cluster:MCL_coexpression_mm9:381
Association with transcript: 64bp_to_ENSMUST00000002445, uc008dct.1, uc008dcu.1, uc008dcv.1_5end
EntrezGene:Ranbp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ranbp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.60e-1323
neuroblast (sensu Vertebrata)3.60e-1323
neuron5.03e-1033
neuronal stem cell5.03e-1033
neuroblast5.03e-1033
electrically signaling cell5.03e-1033
neural cell1.83e-0843
ectodermal cell4.22e-0844
neurectodermal cell4.22e-0844
electrically responsive cell4.43e-0839
electrically active cell4.43e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.33e-2154
central nervous system1.78e-2073
nervous system1.98e-2075
neural tube1.16e-1952
neural rod1.16e-1952
future spinal cord1.16e-1952
neural keel1.16e-1952
gray matter6.20e-1834
neurectoderm4.10e-1764
neural plate4.10e-1764
presumptive neural plate4.10e-1764
brain5.27e-1747
future brain5.27e-1747
regional part of brain3.31e-1646
brain grey matter4.78e-1529
regional part of telencephalon4.78e-1529
telencephalon4.78e-1529
ectoderm-derived structure6.44e-1595
ectoderm6.44e-1595
presumptive ectoderm6.44e-1595
anterior neural tube1.57e-1440
regional part of forebrain9.79e-1439
forebrain9.79e-1439
future forebrain9.79e-1439
ecto-epithelium2.62e-1373
pre-chordal neural plate1.32e-1249
cerebral cortex4.32e-0921
cerebral hemisphere4.32e-0921
pallium4.32e-0921
structure with developmental contribution from neural crest1.45e-0892
regional part of cerebral cortex4.15e-0817
basal ganglion1.19e-078
nuclear complex of neuraxis1.19e-078
aggregate regional part of brain1.19e-078
collection of basal ganglia1.19e-078
cerebral subcortex1.19e-078
tube3.68e-07114
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