FFCP PHASE1:Mm9::chr17:55584673..55584686,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240119 | |EntrezGene=240119 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=B2RQY9,Q76K27,A9C433 | |UniProt=B2RQY9,Q76K27,A9C433 | ||
|association_with_transcript=0bp_to_ENSMUST00000086878,ENSMUST00000133899_5end | |association_with_transcript=0bp_to_ENSMUST00000086878,ENSMUST00000133899_5end | ||
|cluster_id=chr17:55584673..55584686,+ | |||
|description=CAGE_peak_3_at_St6gal2_5end | |description=CAGE_peak_3_at_St6gal2_5end | ||
|id=chr17:55584673..55584686,+ | |id=chr17:55584673..55584686,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.63e-15!23;CL:0000337!1.63e-15!23;CL:0000540!3.83e-09!33;CL:0000047!3.83e-09!33;CL:0000031!3.83e-09!33;CL:0000404!3.83e-09!33 | |ontology_enrichment_celltype=CL:0000117!1.63e-15!23;CL:0000337!1.63e-15!23;CL:0000540!3.83e-09!33;CL:0000047!3.83e-09!33;CL:0000031!3.83e-09!33;CL:0000404!3.83e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.51e-23,23;CL:0000337,4.51e-23,23;CL:0000540,2.67e-15,33;CL:0000047,2.67e-15,33;CL:0000031,2.67e-15,33;CL:0000404,2.67e-15,33;CL:0000393,1.50e-12,39;CL:0000211,1.50e-12,39;CL:0000120,7.65e-12,3;CL:0002613,1.24e-11,3;CL:0002319,3.83e-11,43;CL:0000221,7.86e-11,44;CL:0000133,7.86e-11,44;CL:0002610,7.03e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.88e-19!34;UBERON:0000955!7.44e-19!50;UBERON:0006238!7.44e-19!50;UBERON:0003056!9.60e-19!49;UBERON:0001049!1.36e-18!52;UBERON:0005068!1.36e-18!52;UBERON:0006241!1.36e-18!52;UBERON:0007135!1.36e-18!52;UBERON:0000033!1.89e-18!63;UBERON:0002616!3.32e-18!49;UBERON:0001017!3.98e-18!73;UBERON:0005743!3.98e-18!73;UBERON:0000073!7.74e-18!75;UBERON:0001016!7.74e-18!75;UBERON:0003080!6.36e-17!40;UBERON:0002780!3.44e-16!39;UBERON:0001890!3.44e-16!39;UBERON:0006240!3.44e-16!39;UBERON:0002346!3.88e-16!71;UBERON:0003075!3.88e-16!71;UBERON:0007284!3.88e-16!71;UBERON:0002791!1.81e-15!29;UBERON:0003528!1.81e-15!29;UBERON:0001893!1.81e-15!29;UBERON:0004121!3.58e-14!102;UBERON:0000924!3.58e-14!102;UBERON:0006601!3.58e-14!102;UBERON:0007811!1.13e-12!86;UBERON:0000153!2.74e-12!94;UBERON:0000956!2.95e-12!21;UBERON:0001869!2.95e-12!21;UBERON:0000203!2.95e-12!21;UBERON:0002619!4.22e-10!17;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.02e-17,34;UBERON:0001017,1.02e-16,73;UBERON:0000073,1.08e-16,54;UBERON:0001016,3.67e-16,75;UBERON:0004121,7.70e-15,95;UBERON:0000924,7.70e-15,95;UBERON:0006601,7.70e-15,95;UBERON:0003528,8.97e-15,29;UBERON:0002791,8.97e-15,29;UBERON:0001893,8.97e-15,29;UBERON:0003056,1.05e-12,49;UBERON:0002780,2.50e-12,39;UBERON:0001890,2.50e-12,39;UBERON:0006240,2.50e-12,39;UBERON:0002346,4.77e-12,64;UBERON:0003075,4.77e-12,64;UBERON:0007284,4.77e-12,64;UBERON:0003080,5.88e-12,40;UBERON:0000369,6.08e-12,5;UBERON:0002435,6.08e-12,5;UBERON:0000204,6.08e-12,5;UBERON:0010082,6.08e-12,5;UBERON:0001049,7.60e-12,52;UBERON:0005068,7.60e-12,52;UBERON:0006241,7.60e-12,52;UBERON:0007135,7.60e-12,52;UBERON:0002619,2.30e-11,17;UBERON:0010371,3.85e-10,73;UBERON:0002616,4.57e-10,46;UBERON:0004684,7.03e-10,3;UBERON:0002275,7.03e-10,3;UBERON:0000955,8.47e-10,47;UBERON:0006238,8.47e-10,47;UBERON:0000956,5.61e-09,21;UBERON:0001869,5.61e-09,21;UBERON:0000203,5.61e-09,21;UBERON:0002021,4.60e-08,10;UBERON:0000411,4.60e-08,10;UBERON:0001950,4.60e-08,10;UBERON:0002420,1.81e-07,8;UBERON:0007245,1.81e-07,8;UBERON:0010009,1.81e-07,8;UBERON:0010011,1.81e-07,8;UBERON:0000454,1.81e-07,8;UBERON:0010314,2.40e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86717736492834,5.28990979272033,5.07065122804943,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,1.95985278743926,1.72521847832825,0.919218786610021,1.10115880999389,1.0214987046815,1.22885226604995,4.74790635828698,3.11057988248193,5.73004707612436,0,0,0.916789486660861,0.883885756421003,1.99320353118744,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,3.5183218591602,0.695297280769106,1.02286182932132,0.20778804455956,1.46017136760982,0,0,0,0,0.650602214813519,0,0,0.30140963567143,1.90502197623718,1.15302348256365,0.374806898238915,0.776110112217047,0.431135985865684,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.415149390336707,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,0.50695859978048,0.377252682772152,0.749132059759059,0.512201219238954,0.287177344778066,0,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0,0.135804113845862,1.12228454331548,0.355905054372522,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,1.24905288968973,0,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86717736492834,5.28990979272033,5.07065122804943,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.270011876663381,0.420649922702764,0.285650984403804,0.441737081903227,1.95985278743926,1.72521847832825,0.919218786610021,1.10115880999389,1.0214987046815,1.22885226604995,4.74790635828698,3.11057988248193,5.73004707612436,0,0,0.916789486660861,0.883885756421003,1.99320353118744,1.3047961207771,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.457500602818626,3.5183218591602,0.695297280769106,1.02286182932132,0.20778804455956,1.46017136760982,0,0,0,0,0.650602214813519,0,0,0.30140963567143,1.90502197623718,1.15302348256365,0.374806898238915,0.776110112217047,0.431135985865684,0.378212160335639,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.13195073617213,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.814824882210129,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,0,0.405450430580328,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,1.71868654031819,0.515559547031063,0.685082519770642,2.2661816921691,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.415149390336707,0.798049746802062,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.824140228955577,0.962757628775446,1.01078884705519,0.50695859978048,0.377252682772152,0.749132059759059,0.512201219238954,0.287177344778066,0,0.347652977834566,0.578727661391115,0.824171801606613,0.588795680537589,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0,0.135804113845862,1.12228454331548,0.355905054372522,0.197008964751127,0.409231043169689,0.619747364743864,0.578719832943424,1.24905288968973,0,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p3@St6gal2 | |short_description=p3@St6gal2 | ||
}} | }} |
Latest revision as of 16:34, 26 September 2015
Short description: | p3@St6gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_St6gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000086878, ENSMUST00000133899_5end |
EntrezGene: | St6gal2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.51e-23 | 23 |
neuroblast (sensu Vertebrata) | 4.51e-23 | 23 |
neuron | 2.67e-15 | 33 |
neuronal stem cell | 2.67e-15 | 33 |
neuroblast | 2.67e-15 | 33 |
electrically signaling cell | 2.67e-15 | 33 |
electrically responsive cell | 1.50e-12 | 39 |
electrically active cell | 1.50e-12 | 39 |
granule cell | 7.65e-12 | 3 |
striatum neuron | 1.24e-11 | 3 |
neural cell | 3.83e-11 | 43 |
ectodermal cell | 7.86e-11 | 44 |
neurectodermal cell | 7.86e-11 | 44 |
raphe nuclei neuron | 7.03e-10 | 3 |