FFCP PHASE1:Hg19::chr12:125634292..125634301,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125634292..125634301,- | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_at_chr12:125634292..125634301,- | |description=CAGE_peak_at_chr12:125634292..125634301,- | ||
|id=chr12:125634292..125634301,- | |id=chr12:125634292..125634301,- | ||
|ontology_enrichment_celltype=CL:0000945!1.53e-33!24;CL:0000826!1.53e-33!24;CL:0000542!5.73e-17!53;CL:0000051!5.73e-17!53;CL:0000785!2.72e-15!2;CL:0000955!2.72e-15!2;CL:0000818!2.72e-15!2;CL:0000954!2.72e-15!2;CL:0000816!2.72e-15!2;CL:0000838!1.99e-14!52;CL:0000817!1.70e-10!3;CL:0000819!1.13e-08!1;CL:0000946!2.50e-08!1;CL:0000786!2.50e-08!1;CL:0000980!2.50e-08!1;CL:0000342!2.89e-08!1;CL:0002565!2.89e-08!1;CL:0002557!4.11e-08!1;CL:0002087!1.78e-07!119 | |ontology_enrichment_celltype=CL:0000945!1.53e-33!24;CL:0000826!1.53e-33!24;CL:0000542!5.73e-17!53;CL:0000051!5.73e-17!53;CL:0000785!2.72e-15!2;CL:0000955!2.72e-15!2;CL:0000818!2.72e-15!2;CL:0000954!2.72e-15!2;CL:0000816!2.72e-15!2;CL:0000838!1.99e-14!52;CL:0000817!1.70e-10!3;CL:0000819!1.13e-08!1;CL:0000946!2.50e-08!1;CL:0000786!2.50e-08!1;CL:0000980!2.50e-08!1;CL:0000342!2.89e-08!1;CL:0002565!2.89e-08!1;CL:0002557!4.11e-08!1;CL:0002087!1.78e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000945;2.45e-09;24!CL:0000542;1.30e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,3.99e-50,1;CL:0000785,7.14e-26,2;CL:0000955,7.14e-26,2;CL:0000818,7.14e-26,2;CL:0000954,7.14e-26,2;CL:0000816,7.14e-26,2;CL:0000817,9.46e-18,3;CL:0000945,2.45e-09,24;CL:0000826,2.45e-09,24;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.99e-50;1!CL:0000954;7.14e-26;2!CL:0000051;1.30e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.72e-25!10;DOID:12603!1.05e-08!1;DOID:0060073!1.13e-08!1;DOID:8675!1.13e-08!1;DOID:630!1.52e-08!1;DOID:0050177!1.52e-08!1;DOID:0050427!1.52e-08!1;DOID:4960!2.69e-08!1;DOID:0070004!2.69e-08!1;DOID:2355!3.10e-08!1;DOID:2531!7.87e-08!51;DOID:0060083!7.87e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:12603;3.99e-50;1!DOID:0060058;7.72e-21;10!DOID:2531;5.15e-07;51!DOID:0060083;5.15e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.42e-50,1;DOID:0060073,3.99e-50,1;DOID:8675,3.99e-50,1;DOID:0060058,7.73e-21,10;DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!3.93e-10!3;UBERON:0004854!3.93e-10!3;UBERON:0009034!3.93e-10!3;UBERON:0002095!3.93e-10!3;UBERON:0004782!3.93e-10!3;UBERON:0003281!3.93e-10!3;UBERON:0009664!3.93e-10!3;UBERON:0002296!3.93e-10!3;UBERON:0005602!3.93e-10!3;UBERON:0001179!3.93e-10!3;UBERON:0006293!3.93e-10!3;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0002171!1.88e-08!1;UBERON:0006518!1.88e-08!1;UBERON:0008949!1.88e-08!1;UBERON:0000101!1.88e-08!1;UBERON:0002167!1.88e-08!1;UBERON:0002506!2.89e-08!1;UBERON:0001769!2.89e-08!1;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;3.99e-50;1!UBERON:0001153;3.99e-50;1!UBERON:0009854;3.99e-50;1!UBERON:0009856;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.58e-50,1;UBERON:0001153,6.58e-50,1;UBERON:0001045,6.58e-50,1;UBERON:0004907,3.60e-11,5;UBERON:0001155,8.85e-07,9 | |||
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|short_description=p@chr12:125634292..125634301,- | |short_description=p@chr12:125634292..125634301,- | ||
}} | }} |
Latest revision as of 06:31, 24 July 2015
Short description: | p@chr12:125634292..125634301, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125634292..125634301, - |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 3.99e-50 | 1 |
mature B cell | 7.14e-26 | 2 |
pre-B-II cell | 7.14e-26 | 2 |
transitional stage B cell | 7.14e-26 | 2 |
small pre-B-II cell | 7.14e-26 | 2 |
immature B cell | 7.14e-26 | 2 |
precursor B cell | 9.46e-18 | 3 |
lymphocyte of B lineage | 2.45e-09 | 24 |
pro-B cell | 2.45e-09 | 24 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.58e-50 | 1 |
caecum | 6.58e-50 | 1 |
midgut | 6.58e-50 | 1 |
lower digestive tract | 3.60e-11 | 5 |
colon | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.42e-50 | 1 |
lymphatic system cancer | 3.99e-50 | 1 |
lymphosarcoma | 3.99e-50 | 1 |
lymphoma | 7.73e-21 | 10 |
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |