FFCP PHASE1:Mm9::chr17:27839467..27839470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=408 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:27839467..27839470,+ | |||
|description=CAGE_peak_at_chr17:27839467..27839470,+ | |description=CAGE_peak_at_chr17:27839467..27839470,+ | ||
|id=chr17:27839467..27839470,+ | |id=chr17:27839467..27839470,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!8.99e-24!86;UBERON:0000033!2.88e-22!63;UBERON:0000153!5.82e-21!94;UBERON:0003056!6.99e-19!49;UBERON:0002346!7.00e-19!71;UBERON:0003075!7.00e-19!71;UBERON:0007284!7.00e-19!71;UBERON:0001049!2.70e-18!52;UBERON:0005068!2.70e-18!52;UBERON:0006241!2.70e-18!52;UBERON:0007135!2.70e-18!52;UBERON:0000955!3.44e-18!50;UBERON:0006238!3.44e-18!50;UBERON:0002616!3.15e-17!49;UBERON:0001017!3.09e-16!73;UBERON:0005743!3.09e-16!73;UBERON:0000073!2.18e-15!75;UBERON:0001016!2.18e-15!75;UBERON:0004121!3.77e-14!102;UBERON:0000924!3.77e-14!102;UBERON:0006601!3.77e-14!102;UBERON:0003080!6.18e-14!40;UBERON:0002780!3.32e-13!39;UBERON:0001890!3.32e-13!39;UBERON:0006240!3.32e-13!39;UBERON:0002020!2.94e-10!34;UBERON:0002021!3.50e-09!10;UBERON:0000411!3.50e-09!10;UBERON:0001950!3.50e-09!10;UBERON:0002791!1.35e-08!29;UBERON:0003528!1.35e-08!29;UBERON:0001893!1.35e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.85e-32,10;UBERON:0000411,1.85e-32,10;UBERON:0001950,1.85e-32,10;UBERON:0002619,5.96e-23,17;UBERON:0000955,7.62e-20,47;UBERON:0006238,7.62e-20,47;UBERON:0003056,1.94e-18,49;UBERON:0000956,2.79e-18,21;UBERON:0001869,2.79e-18,21;UBERON:0000203,2.79e-18,21;UBERON:0002346,1.00e-17,64;UBERON:0003075,1.00e-17,64;UBERON:0007284,1.00e-17,64;UBERON:0002616,1.45e-17,46;UBERON:0000073,1.03e-16,54;UBERON:0002780,1.88e-15,39;UBERON:0001890,1.88e-15,39;UBERON:0006240,1.88e-15,39;UBERON:0001049,3.09e-15,52;UBERON:0005068,3.09e-15,52;UBERON:0006241,3.09e-15,52;UBERON:0007135,3.09e-15,52;UBERON:0010371,3.64e-15,73;UBERON:0003080,5.20e-15,40;UBERON:0004121,4.14e-14,95;UBERON:0000924,4.14e-14,95;UBERON:0006601,4.14e-14,95;UBERON:0001017,1.85e-13,73;UBERON:0001016,5.08e-13,75;UBERON:0003528,8.52e-13,29;UBERON:0002791,8.52e-13,29;UBERON:0001893,8.52e-13,29;UBERON:0010314,2.14e-11,92;UBERON:0002020,1.12e-10,34 | |||
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|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.563154888606667,0,0.513653904676515,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.127687338085188,0.153606533256243,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0.45839474333043,0.589257170947335,0.427115042397309,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0.220841518460394,0.484875253135222,0,2.34224637609238,2.93225389538837,0,0,0,0,0.748953197024114,0.457500602818626,0.753926112677186,0.869121600961382,1.79000820131231,1.0389402227978,1.1356888414743,0,0.124406970610093,0,1.26265113531884,0.130120442962704,0,0.180062129805349,0.60281927134286,0.680364991513279,0.768682321709099,1.59292931751539,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,3.53453448063988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.258717367565509,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0.777804753376191,0.258319646955462,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0.480781798079875,0.147689527174577,0.302899349844443,0.0762068066549998,0.604957110821043,0.38983152295901,0.769694733122636,1.16876902181569,0,0,0,0,0,0,0,0,0,1.12950368523413,1.38097570952153,2.86447756719698,2.06223818812425,0,2.2661816921691,3.37511250115903,2.2516060161211,2.71885445390523,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0,0,0.177475806159338,0,0.145346416632329,0,0.25384382367503,0.182927972872773,0.789209134313529,0,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr17:27839467..27839470,+ | |short_description=p@chr17:27839467..27839470,+ | ||
}} | }} |
Latest revision as of 12:34, 4 August 2015
Short description: | p@chr17:27839467..27839470, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:27839467..27839470, + |
Coexpression cluster: | MCL_coexpression_mm9:408 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.85e-32 | 10 |
visual cortex | 1.85e-32 | 10 |
neocortex | 1.85e-32 | 10 |
regional part of cerebral cortex | 5.96e-23 | 17 |
brain | 7.62e-20 | 47 |
future brain | 7.62e-20 | 47 |
pre-chordal neural plate | 1.94e-18 | 49 |
cerebral cortex | 2.79e-18 | 21 |
cerebral hemisphere | 2.79e-18 | 21 |
pallium | 2.79e-18 | 21 |
neurectoderm | 1.00e-17 | 64 |
neural plate | 1.00e-17 | 64 |
presumptive neural plate | 1.00e-17 | 64 |
regional part of brain | 1.45e-17 | 46 |
regional part of nervous system | 1.03e-16 | 54 |
regional part of forebrain | 1.88e-15 | 39 |
forebrain | 1.88e-15 | 39 |
future forebrain | 1.88e-15 | 39 |
neural tube | 3.09e-15 | 52 |
neural rod | 3.09e-15 | 52 |
future spinal cord | 3.09e-15 | 52 |
neural keel | 3.09e-15 | 52 |
ecto-epithelium | 3.64e-15 | 73 |
anterior neural tube | 5.20e-15 | 40 |
ectoderm-derived structure | 4.14e-14 | 95 |
ectoderm | 4.14e-14 | 95 |
presumptive ectoderm | 4.14e-14 | 95 |
central nervous system | 1.85e-13 | 73 |
nervous system | 5.08e-13 | 75 |
brain grey matter | 8.52e-13 | 29 |
regional part of telencephalon | 8.52e-13 | 29 |
telencephalon | 8.52e-13 | 29 |
structure with developmental contribution from neural crest | 2.14e-11 | 92 |
gray matter | 1.12e-10 | 34 |