FFCP PHASE1:Mm9::chr17:27760733..27760760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56409 | |EntrezGene=56409 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JI46 | |UniProt=Q9JI46 | ||
|association_with_transcript=-323bp_to_ENSMUST00000025050_5end | |association_with_transcript=-323bp_to_ENSMUST00000025050_5end | ||
|cluster_id=chr17:27760733..27760760,- | |||
|description=CAGE_peak_5_at_Nudt3_5end | |description=CAGE_peak_5_at_Nudt3_5end | ||
|id=chr17:27760733..27760760,- | |id=chr17:27760733..27760760,- | ||
|ontology_enrichment_celltype=CL:0000221!7.34e-14!44;CL:0000133!7.34e-14!44;CL:0002319!1.35e-13!43;CL:0000055!2.57e-12!50;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000393!6.02e-11!39;CL:0000211!6.02e-11!39;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23 | |ontology_enrichment_celltype=CL:0000221!7.34e-14!44;CL:0000133!7.34e-14!44;CL:0002319!1.35e-13!43;CL:0000055!2.57e-12!50;CL:0000540!1.89e-11!33;CL:0000047!1.89e-11!33;CL:0000031!1.89e-11!33;CL:0000404!1.89e-11!33;CL:0000393!6.02e-11!39;CL:0000211!6.02e-11!39;CL:0000117!1.02e-08!23;CL:0000337!1.02e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.33e-15,44;CL:0000133,9.33e-15,44;CL:0002319,2.21e-14,43;CL:0000540,2.98e-11,33;CL:0000047,2.98e-11,33;CL:0000031,2.98e-11,33;CL:0000404,2.98e-11,33;CL:0000393,3.30e-10,39;CL:0000211,3.30e-10,39;CL:0002321,2.16e-09,70;CL:0000117,2.96e-08,23;CL:0000337,2.96e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!7.17e-20!102;UBERON:0000924!7.17e-20!102;UBERON:0006601!7.17e-20!102;UBERON:0000073!3.74e-18!75;UBERON:0001016!3.74e-18!75;UBERON:0001017!3.71e-17!73;UBERON:0005743!3.71e-17!73;UBERON:0002346!1.31e-15!71;UBERON:0003075!1.31e-15!71;UBERON:0007284!1.31e-15!71;UBERON:0000033!9.51e-13!63;UBERON:0001049!1.47e-11!52;UBERON:0005068!1.47e-11!52;UBERON:0006241!1.47e-11!52;UBERON:0007135!1.47e-11!52;UBERON:0002616!4.38e-10!49;UBERON:0003056!6.88e-10!49;UBERON:0000955!2.33e-09!50;UBERON:0006238!2.33e-09!50;UBERON:0002020!7.10e-09!34;UBERON:0003080!2.35e-07!40;UBERON:0002780!4.96e-07!39;UBERON:0001890!4.96e-07!39;UBERON:0006240!4.96e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.04e-20,95;UBERON:0000924,1.04e-20,95;UBERON:0006601,1.04e-20,95;UBERON:0001016,5.16e-18,75;UBERON:0010314,1.64e-17,92;UBERON:0001017,9.61e-17,73;UBERON:0002346,1.82e-15,64;UBERON:0003075,1.82e-15,64;UBERON:0007284,1.82e-15,64;UBERON:0010371,3.24e-14,73;UBERON:0000073,1.91e-11,54;UBERON:0001049,2.28e-10,52;UBERON:0005068,2.28e-10,52;UBERON:0006241,2.28e-10,52;UBERON:0007135,2.28e-10,52;UBERON:0003076,2.41e-08,12;UBERON:0003057,2.41e-08,12;UBERON:0002020,9.51e-08,34;UBERON:0003056,1.12e-07,49;UBERON:0002616,4.43e-07,46;UBERON:0000955,9.33e-07,47;UBERON:0006238,9.33e-07,47 | |||
|phase1_expression=0.960893082628764,0,0.909998478779072,0,1.00179145989269,0.33575854382378,0,0.129123323441576,0.140788722151667,0,0,0.319088635981346,0,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.765389611359628,1.78723712161594,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0,0,0.252030129759931,0.443461021310609,1.27006134691926,1.23012957516914,0,0,0,0.204169356262369,0.837063261473815,0,0.523523743973798,0.588231488031014,1.36609096991689,0,1.00717454380462,0.506884656097573,1.10128051297009,0,1.09012578190223,3.07560655828261,1.94429899074283,0.839918529752175,1.43752564364972,0.335565212115473,0,0,1.02903774414379,0.573066879877513,0.515672092277442,2.02316460859598,0.528990979272033,2.53532561402472,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,1.79760066311043,1.53687322128622,0.933206510776299,1.08004750665353,0.630974884054146,6.28432165688368,3.97563373712904,0.979926393719632,0.766763768145891,0.919218786610021,2.20231761998777,2.29837208553338,1.84327839907492,2.90149833006426,2.28719109006024,2.6045668527838,4.74611098302348,3.37657566019008,1.37518422999129,2.06240009831567,2.84743361598206,1.1183966749518,1.96888102666279,2.19157524309678,0,0,0,0,0,0,0.421333260395256,1.1930122580464,1.29893002301434,0.70667914902068,1.26759077799012,1.28326477414318,2.54805239706646,0,1.08245520505607,1.26679932737549,0.505524445014783,0.22836775943812,0,1.03909497345377,0.520455980298408,0.304465478312141,1.61430848079241,1.05505848386836,0.23517741427141,1.25666591329675,0,0.86759614151947,0.884610551949874,1.29413479957927,1.76673214768315,0.484875253135222,0,3.22058876712702,4.39838084308256,0,0.359445373517761,1.19980546198682,1.14363204365758,1.64769703345305,1.37250180845588,0.753926112677186,1.91206752211504,2.81287003063364,2.0778804455956,1.78465389374533,0,0.622034853050465,0.252722758433675,2.31486041475121,0.650602214813519,1.60931473103431,1.44049703844279,1.20563854268572,1.42876648217788,1.40925092313335,2.15513966487376,1.55222022443409,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0.702213187313235,1.02939162845886,1.70498099637356,1.03562886267751,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.925602677324269,2.55787339225449,2.14618721119695,2.21854150497622,4.60767579757745,2.13417703302824,3.40489000092594,1.90059983652932,0.658650345873152,2.41571553768669,0.630869845692382,0.514523061896422,0.991256348951394,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.442655759869801,0.442830443938806,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.982794975566015,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0.664394068946325,0,0,0.863424909329478,0.578596234326046,0,0.54390568381871,3.93411418415229,1.10374698521893,3.05046120976805,2.22702204525186,0.655739781506702,1.51482556322624,1.89304931649754,1.95219372148319,2.58508077279359,1.19484398976276,0.445597348164788,2.26461224631066,2.42886421004937,1.46127928955656,1.18586333383957,0,0.709700426041343,0.890328018336276,0.325773918707152,1.15479086080775,0,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,1.26042765821917,0.646793418913773,0.857348140126369,1.24138163549592,0.713475270408282,0.493647061806363,0.608929898229199,0.469343416127421,0.21183207086382,1.10264199027481,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.492422699235184,0,2.41052892613663,0.683483523191411,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0.316335993581135,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.495920734352016,0.785267825952089,0.259229946583586,1.86401793926078,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.904118764344118,0.168956125490778,0.234714477291508,0.2604087696879,0.629156066554265,0.483168241652012,0.864090018773596,0.316011120628178,0.608175645870493,0.102710957164827,0.649604114888975,0.537080087002444,0.198681354781265,0,0.147689527174577,0.201932899896295,0.15241361331,0.504130925684203,0.292373642219257,0.577271049841977,0.116876902181569,0.680191150845634,0.221985953374065,0.897138566094757,0.167884616364078,0,0,0.36630324853453,0.214368379079066,1.00314420807073,1.12950368523413,0.92065047301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| |phase1_expression=0.960893082628764,0,0.909998478779072,0,1.00179145989269,0.33575854382378,0,0.129123323441576,0.140788722151667,0,0,0.319088635981346,0,0,0.666219523631325,0.202475267389826,0,0.315462165358238,0.137114433605739,0,0.765389611359628,1.78723712161594,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0,0,0.252030129759931,0.443461021310609,1.27006134691926,1.23012957516914,0,0,0,0.204169356262369,0.837063261473815,0,0.523523743973798,0.588231488031014,1.36609096991689,0,1.00717454380462,0.506884656097573,1.10128051297009,0,1.09012578190223,3.07560655828261,1.94429899074283,0.839918529752175,1.43752564364972,0.335565212115473,0,0,1.02903774414379,0.573066879877513,0.515672092277442,2.02316460859598,0.528990979272033,2.53532561402472,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,1.79760066311043,1.53687322128622,0.933206510776299,1.08004750665353,0.630974884054146,6.28432165688368,3.97563373712904,0.979926393719632,0.766763768145891,0.919218786610021,2.20231761998777,2.29837208553338,1.84327839907492,2.90149833006426,2.28719109006024,2.6045668527838,4.74611098302348,3.37657566019008,1.37518422999129,2.06240009831567,2.84743361598206,1.1183966749518,1.96888102666279,2.19157524309678,0,0,0,0,0,0,0.421333260395256,1.1930122580464,1.29893002301434,0.70667914902068,1.26759077799012,1.28326477414318,2.54805239706646,0,1.08245520505607,1.26679932737549,0.505524445014783,0.22836775943812,0,1.03909497345377,0.520455980298408,0.304465478312141,1.61430848079241,1.05505848386836,0.23517741427141,1.25666591329675,0,0.86759614151947,0.884610551949874,1.29413479957927,1.76673214768315,0.484875253135222,0,3.22058876712702,4.39838084308256,0,0.359445373517761,1.19980546198682,1.14363204365758,1.64769703345305,1.37250180845588,0.753926112677186,1.91206752211504,2.81287003063364,2.0778804455956,1.78465389374533,0,0.622034853050465,0.252722758433675,2.31486041475121,0.650602214813519,1.60931473103431,1.44049703844279,1.20563854268572,1.42876648217788,1.40925092313335,2.15513966487376,1.55222022443409,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,0,0,0.702213187313235,1.02939162845886,1.70498099637356,1.03562886267751,0.938104239924385,0.36012412292203,0.23674473558521,0.590292695242212,0.925602677324269,2.55787339225449,2.14618721119695,2.21854150497622,4.60767579757745,2.13417703302824,3.40489000092594,1.90059983652932,0.658650345873152,2.41571553768669,0.630869845692382,0.514523061896422,0.991256348951394,0,0.213288250535234,0.696710015581316,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0.898819408654221,0.432276099749388,0,0.189667900953082,0.228497025219458,0,0.610953983535943,0.193952487167626,0.210407459670956,0.442655759869801,0.442830443938806,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0.982794975566015,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0,0,0.554259570499814,0.757965647081939,0.651859905768103,0.509235257325564,0.469380496577004,0.335012514883631,0,0.390267295715598,0.472905432318573,0.664394068946325,0,0,0.863424909329478,0.578596234326046,0,0.54390568381871,3.93411418415229,1.10374698521893,3.05046120976805,2.22702204525186,0.655739781506702,1.51482556322624,1.89304931649754,1.95219372148319,2.58508077279359,1.19484398976276,0.445597348164788,2.26461224631066,2.42886421004937,1.46127928955656,1.18586333383957,0,0.709700426041343,0.890328018336276,0.325773918707152,1.15479086080775,0,0.242780636154981,0.302323556964751,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0,0,0,0,0.340439605753788,1.26042765821917,0.646793418913773,0.857348140126369,1.24138163549592,0.713475270408282,0.493647061806363,0.608929898229199,0.469343416127421,0.21183207086382,1.10264199027481,0.32977250588296,0.161464426695906,0.241251699712623,0.238744688006273,0.492422699235184,0,2.41052892613663,0.683483523191411,0.206386867963223,0,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0,0.138199973804424,0,0.316335993581135,0.609958401380546,0.324016022465404,0.418176592028937,0,0.539457385539283,0.495920734352016,0.785267825952089,0.259229946583586,1.86401793926078,0.56369293868419,0.299033092087958,0.330916980914195,0.388902376688095,0.904118764344118,0.168956125490778,0.234714477291508,0.2604087696879,0.629156066554265,0.483168241652012,0.864090018773596,0.316011120628178,0.608175645870493,0.102710957164827,0.649604114888975,0.537080087002444,0.198681354781265,0,0.147689527174577,0.201932899896295,0.15241361331,0.504130925684203,0.292373642219257,0.577271049841977,0.116876902181569,0.680191150845634,0.221985953374065,0.897138566094757,0.167884616364078,0,0,0.36630324853453,0.214368379079066,1.00314420807073,1.12950368523413,0.92065047301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| ||
|short_description=p5@Nudt3 | |short_description=p5@Nudt3 | ||
}} | }} |
Latest revision as of 03:44, 26 September 2015
Short description: | p5@Nudt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nudt3_5end |
Coexpression cluster: | NA |
Association with transcript: | -323bp_to_ENSMUST00000025050_5end |
EntrezGene: | Nudt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.33e-15 | 44 |
neurectodermal cell | 9.33e-15 | 44 |
neural cell | 2.21e-14 | 43 |
neuron | 2.98e-11 | 33 |
neuronal stem cell | 2.98e-11 | 33 |
neuroblast | 2.98e-11 | 33 |
electrically signaling cell | 2.98e-11 | 33 |
electrically responsive cell | 3.30e-10 | 39 |
electrically active cell | 3.30e-10 | 39 |
embryonic cell | 2.16e-09 | 70 |
CNS neuron (sensu Vertebrata) | 2.96e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.96e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.04e-20 | 95 |
ectoderm | 1.04e-20 | 95 |
presumptive ectoderm | 1.04e-20 | 95 |
nervous system | 5.16e-18 | 75 |
structure with developmental contribution from neural crest | 1.64e-17 | 92 |
central nervous system | 9.61e-17 | 73 |
neurectoderm | 1.82e-15 | 64 |
neural plate | 1.82e-15 | 64 |
presumptive neural plate | 1.82e-15 | 64 |
ecto-epithelium | 3.24e-14 | 73 |
regional part of nervous system | 1.91e-11 | 54 |
neural tube | 2.28e-10 | 52 |
neural rod | 2.28e-10 | 52 |
future spinal cord | 2.28e-10 | 52 |
neural keel | 2.28e-10 | 52 |
posterior neural tube | 2.41e-08 | 12 |
chordal neural plate | 2.41e-08 | 12 |
gray matter | 9.51e-08 | 34 |
pre-chordal neural plate | 1.12e-07 | 49 |
regional part of brain | 4.43e-07 | 46 |
brain | 9.33e-07 | 47 |
future brain | 9.33e-07 | 47 |